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基于图挖掘的蛋白质群落算法

A graph mining-based algorithm for protein communities
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摘要 设计了一种在蛋白质相互作用网络中寻找感兴趣的蛋白质群落的算法。该算法的关键是通过某一个种子(或种子集),先寻找该种子(或者种子集)所处的核,然后扩展核,使之能将感兴趣的蛋白质群落挖掘出来。结果表明,该算法具有更好的免疫力,能够在具有干扰的蛋白质网络中有效识别蛋白质群落。 An improved algorithm to seek protein communities of interest in protein-protein interaction networks was designed.The key to the algorithm is first to find its(or their) core where it locates(or they locate) in through a seed(or seed set),and then to expand the core so that the interested protein communities are acquired.The results show that the algorithm is effective to determine the protein communities in protein-protein interaction networks with some interference.
作者 陈颖 孙小兵
出处 《中南大学学报(自然科学版)》 EI CAS CSCD 北大核心 2013年第S2期304-307,共4页 Journal of Central South University:Science and Technology
关键词 群落 群入度 群出度 community in-community degree core out-community degree
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参考文献7

  • 1Radicchi F,Castellano C,Cecconi F,et al.Defining and identifying communities in networks. Proceedings of the National Academy of Sciences of the United States of America . 2004
  • 2Newman MEJ.Modularity and community structure in networks. Proceedings of the National Academy of Sciences of the United States of America . 2006
  • 3F Radicchi,C CASTELLANO,F Cecconi,V Loreto,D Parisi.Defining and identifying communities in networks. Proceedings of the National Academy of Sciences of the United States of America . 2004
  • 4M Girvan,MEJ Newman.Community structure in social and biological networks. Proceedings of the National Academy of Sciences of the United States of America . 2002
  • 5S White,P Smyth.A spectral clustering approach to findingcommunities in graphs. Pro-ceedings of the 5th SIAM International Conference on DataMining . 2005
  • 6Capocci A,Servedio V,Colaiori F,Caldarelli F.Vertex intrinsic fitness:how to produce arbitrary scale-free networks. Lecture Notes in Computer Science . 2004
  • 7Wu D,Hu X.An Efficient Computational Method to Identify a Protein Community from a Seed Protein. . 2005

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