期刊文献+

RNA干扰文库在功能基因组学研究中的发展及应用 被引量:2

Development and Application of RNAi Interference Library in Functional Genomics
下载PDF
导出
摘要 RNA干扰(RNAi)是双链RNA分子在mRNA水平上诱发的序列特异性的转录后基因表达沉默,从基因组水平设计针对多个靶基因的RNAi序列,建立RNAi文库进行系统性、大规模的筛选工作是功能基因组学研究的有力工具。目前RNAi文库主要包括质粒(或病毒)文库、siRNA表达盒文库、寡核苷酸文库和随机RNAi文库,已经被成功应用于基因功能鉴别、信号转导途径解析和药物靶标筛选等研究领域。近年来,这一领域发展迅速,就RNAi文库的发展应用以及存在的问题与展望进行了综述。 RNA interference (RNAi) is a process in which double-stranded RNA (dsRNA) induces specific postranscriptional silencing of homologous transcripts. Systematic silencing of genes on a genome-wide scale using RNAi library targeting many thousands of genes provides a powerful research tool in functional genomics. RNAi libraries, which may be derived from plasmids cloning, virus packaging, PCR amplification, chemically synthesis or enzymatic digestion, have been successfully used to identify gene function, dissect signaling pathway and discover drug targets, etc. Promising progresses have been made in this field. The development, application and problems of RNAi library methodology and future prospects were reviewed.
出处 《中国生物工程杂志》 CAS CSCD 北大核心 2006年第7期84-89,共6页 China Biotechnology
关键词 RNA干扰文库 功能基因组学 高通量筛选 RNAi library Functional genomics High-throughput screening
  • 相关文献

参考文献26

  • 1Hannon G J.RNA interference.Nature,2002,418 (6894):244 ~ 251
  • 2Downward J.RNA interference.BMJ,2004,328:1245 ~ 1248
  • 3Berns K,Hijmans E M,Mullenders J,et al.A large-scale RNAi screen in human cells identifies new components of p53pathway.Nature,2004,428:431 ~437
  • 4Paddison P J,Silva J M,Conklin D S,et al.A resource for large-scale RNA-interference-based screen in mammals.Nature,2004,428:427 ~ 431
  • 5Aza-Blanc P,Cooper C L,Wagner K,et al.Identification of modulators of trail-induced apoptosis via RNAi-based phenotypic screening.Molecular Cell,2003,12:627 ~ 637
  • 6Kumar R,Conklin D S,Mittal V.High-throughput selection of effective RNAi probes for gene silencing.Genome Research,2003,13:2333 ~2340
  • 7Mousses S,Caplen N,Cornelison R,et al.RNAi microarray analysis in cultured mammalian cells.Genome Research,2003,13:2341 ~2347
  • 8Silva J M,Mizuno H,Brady A,et al.RNA interference microarrays:high-throughput loss-of-function genetics in mammalian cells.Proc Natl Acad Sci USA,2004,101:6548~ 6552
  • 9Zheng L,Liu J,Batalov S,et al.An approach to genomewide screens of expressed small interfering RNAs in mammalian cells.Proc Natl Acad Sci USA,2004,101:135 ~ 140
  • 10Miyagishi M,Matsumoto S,Taira K.Generation of a shRNAi expression library against the whole human transcripts.Virus Research,2004,102:117 ~ 124

二级参考文献19

  • 1J萨姆布鲁克 金冬雁等(译).分子克隆实验指南(第二版)[M].北京:科学出版社,1999.267-269.
  • 2Hannon GJ.RNA interference[J].Nature,2002,418(6894):244.
  • 3Lum L,Yao S,Mozer B,et al.Identification of Hedgehog pathway components by RNAi in Drosophila cultured cells[J].Science,2003,299(5615):2039.
  • 4Kamath RS,Fraser AG,Dong Y,et al.Systematic functional analysis of the Caenorhobditis elegans genome using RNAi[J].Nature,2003,421(6920):231.
  • 5Ashrafi K,Chang FY,Watts JL,et al.Genome-wide RNAi analysis of Caenorhabditis elegans fat regulatory genes[J].Nature,2003,421(6920):268.
  • 6Samuel CE.Knockdown by RNAi-proceed with caution[J].Nat Biotechnol,2004,22(3):280.
  • 7Bass BL.RNA interference.The short answer[J].Nature,2001,411(6836):428.
  • 8Montgomery MK,Fire A.Double-stranded RNA as a mediator in sequencespecific genetic silencing and co-suppression[J].Trends Genet,1998,14(7):255.
  • 9Gou D,Jin N,Liu L.Gene silencing in mammalian cells by PCR-based short hairpin RNA[J].FEBS Lett,2003,548(1-3):113.
  • 10Miyagishi M,Matsumoto S,Taira K.Generation of an shRNAi expression library against the whole human transcripts[J].Virus Res,2004,102(1):117.

共引文献2

同被引文献37

  • 1肖翠英,张思仲.RNA干扰研究的新进展[J].医学分子生物学杂志,2004,1(2):104-106. 被引量:2
  • 2李婧,凌世淦,郑晓飞.RNA干涉文库的设计与应用[J].医学分子生物学杂志,2006,3(4):283-287. 被引量:1
  • 3马建民,赵家良,卞爱琳,程钢炜,张文宝,张华.大鼠结膜囊成纤维细胞TGFβ_2特异性siRNA的筛选及其载体构建的研究[J].眼科研究,2006,24(6):577-581. 被引量:5
  • 4阿帕萨尼K.RNA干扰技术-从基础科学到药物开发[M].殷勤伟,译.北京:科学出版社,2007:225-228.
  • 5Kawasumi,Mizuho-cho,Mizuho-ku,et al.NF-kappaB and rheumatic dis-eases.Endocr Metab Immune Disord Drug Targets.2006;6(4):359-372.
  • 6Bai S,Liu H,Chen KH,et al.NF-KappaB-regulated expression of cellular FLIP protects rheumatoid arthritis synovial fibroblasts from turn ornecrosis factor alpha-mediated apoptosis.Arthritis Rheum.2004;50(12):3844-3855.
  • 7Amin MA,Mansfield PJ,Pakozdi A,et al.lnterleukin-18 induces angiogenic factors in rheumatoid arthritis synovial tissue fibroblasts via distinct signaling pathways.Arthritis Rheum.2007;56(6):1787-1797.
  • 8Roman-Bias JA,Jimenez SA,et al.NF-kappaB as a potential therapeutic target in osteoarthritis and rheumatoid arthritis.Osteoarthritis Cartilage.2006;14 (9):839-848.
  • 9Izmailova ES,Paz N,Alencar H,et al.Use of molecular imaging to quantify response to IKK-2inhibitor treatment in murine arthritis s.Arthritis Rheum.2007;56 (1):117-128.
  • 10Wen D,Nong Y,Morgan JG,et al.A selective small molecule IkappaB Kinase beta inhibitor blocks nuclear factor kappaB-mediated inflammatory responses in human fibroblast-like synoviocytes,chondrocytes,and mast cells.J Pharmacol Exp Ther.2006;317(3):989-1001.

引证文献2

二级引证文献4

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部