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Bioinformatics Research on Chronic Superficial Gastritis of Pi-deficiency Syndrome by Gene Arrays 被引量:10

Bioinformatics Research on Chronic Superficial Gastritis of Pi-deficiency Syndrome by Gene Arrays
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摘要 Objective: To determine the bioinformatical characteristics of differential gene expression in patients with chronic superficial gastritis (CSG) with the Pi-deficiency syndrome (PDS) and those of the non- Pi-deficiency syndrome (non-PDS), i.e. patients of CSG with Pi (脾)-Wei (胃) dampnese-heat syndrome and healthy persons. Methods: With the BRB-Array Tools software package, original data collection and bioinformatic analysis of gene arrays were conducted in 6 CSG patients of PDS (CSG-PDS), 6 CSG patients of non-PDS (CSG-nPDS), and 6 healthy volunteers (Normal). Results: Compared with non-PDS, the gene expressions in PDS with regards to protein synthesis, energy metabolism, immune reaction and ionic transport tended to be down-regulated, while those concerning secretion, cytoskeleton and ubiquitinization were up-regulated dominantly. Conclusions: The two kinds of samples, CSG-PDS/Normal and CSG-PDS/CSG-nPDS, have their respective gene expression profiles with different characteristics. Gene expression profile has certain referential significance in syndrome classification. Objective: To determine the bioinformatical characteristics of differential gene expression in patients with chronic superficial gastritis (CSG) with the Pi-deficiency syndrome (PDS) and those of the non- Pi-deficiency syndrome (non-PDS), i.e. patients of CSG with Pi (脾)-Wei (胃) dampnese-heat syndrome and healthy persons. Methods: With the BRB-Array Tools software package, original data collection and bioinformatic analysis of gene arrays were conducted in 6 CSG patients of PDS (CSG-PDS), 6 CSG patients of non-PDS (CSG-nPDS), and 6 healthy volunteers (Normal). Results: Compared with non-PDS, the gene expressions in PDS with regards to protein synthesis, energy metabolism, immune reaction and ionic transport tended to be down-regulated, while those concerning secretion, cytoskeleton and ubiquitinization were up-regulated dominantly. Conclusions: The two kinds of samples, CSG-PDS/Normal and CSG-PDS/CSG-nPDS, have their respective gene expression profiles with different characteristics. Gene expression profile has certain referential significance in syndrome classification.
出处 《Chinese Journal of Integrative Medicine》 SCIE CAS 2009年第5期341-346,共6页 中国结合医学杂志(英文版)
基金 Supported by the National Natural Science Foundation of China (No.90209004) E-Institute Construction Plan Project of Shanghai Municipal Education Committee(No.E03008)
关键词 chronic superficial gastritis Pi-deficiency syndrome gene chip bio-information analysis BRB- Array Tool software package chronic superficial gastritis, Pi-deficiency syndrome, gene chip, bio-information analysis, BRB- Array Tool software package
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