期刊文献+

Tetrahymena Gene Expression Database (TGED):A resource of microarray data and co-expression analyses for Tetrahymena 被引量:5

Tetrahymena Gene Expression Database (TGED):A resource of microarray data and co-expression analyses for Tetrahymena
原文传递
导出
摘要 Tetrahymena thermophila is a model eukaryotic organism. Functional genomic analyses in Tetrahymena present rich opportunities to address fundamental questions of cell and molecular biology. The Tetrahymena Gene Expression Database (TGED; available at http://tged.ihb.ac.cn) is the first expression database of a ciliated protozoan. It covers three major physiological and developmental states: growth, starvation, and conjugation, and can be accessed through a user-friendly web interface. The gene expression profiles and candidate co-expressed genes for each gene can be retrieved using Gene ID or Gene description searches. Descriptions of standardized methods of sample preparation and the opportunity to add new Tetrahymena microarray data will be of great interest to the Tetrahymena research community. TGED is intended to be a resource for all members of the scientific research community who are interested in Tetrahymena and other ciliates. Tetrahymena thermophila is a model eukaryotic organism. Functional genomic analyses in Tetrahymena present rich opportunities to address fundamental questions of cell and molecular biology. The Tetrahymena Gene Expression Database (TGED; available at http://tged.ihb.ac.cn) is the first expression database of a ciliated protozoan. It covers three major physiological and developmental states: growth, starvation, and conjugation, and can be accessed through a user-friendly web interface. The gene expression profiles and candidate co-expressed genes for each gene can be retrieved using Gene ID or Gene description searches. Descriptions of standardized methods of sample preparation and the opportunity to add new Tetrahymena microarray data will be of great interest to the Tetrahymena research community. TGED is intended to be a resource for all members of the scientific research community who are interested in Tetrahymena and other ciliates.
出处 《Science China(Life Sciences)》 SCIE CAS 2011年第1期65-67,共3页 中国科学(生命科学英文版)
基金 supported by the National Natural Science Foundation of China (Grant Nos. 30870356 and 30970424) the Knowledge Innovation Program of Chinese Academy of Sciences (Grant No. KSCX2-YW-G-072) the National Institutes of Health (Grant Nos. GM021793 and GM072752)
关键词 Tetrahymena thermophila gene expression database CO-EXPRESSION 嗜热四膜虫 基因表达 数据库 资源 列数据 基因组分析 分子生物学 基因身份证
  • 相关文献

参考文献10

  • 1Tetrahymena thermophila. Methods in Cell Biology . 2000
  • 2Miao W,Xiong J,Bowen J, et al.Microarray analyses of gene ex- pression during the Tetrahymena thermophila life cycle. PLoS One . 2009
  • 3Kruger K,Grabowski PJ,Zaug AJ,et al.Self-splicing RNA: autoexcision and autocyclization of the ribosomal RNA intervening sequence of Tetrahymena. Cell . 1982
  • 4Greider CW,Blackburn EH.Identification of a specific telomere terminal transferase activity in Tetrahymena extracts. Cell . 1985
  • 5Irizarry RA,Hobbs B,Collin F,Beazer-Barclay YD,Antonellis KJ,Scherf U,Speed TP.Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics . 2003
  • 6AP Turkewitz,E Orias,G Kapler.Functional genomics: the coming age of Tetrahymena thermophila. Trends in Genetics . 2002
  • 7Martindale,DW,Allis,CD,Bruns,PJ.Conjugation inTetrahymena thermophila. A temporal analysis of cytological stages. Experimental Cell Research . 1982
  • 8Eisen J.A,Coyne R.S,Wu M,Wu D,Thiagarajan M,Wortman J.R,Badger J.H.Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote. Plos Biology . 2006
  • 9Stover,NA,Krieger,CJ,Binkley,G,Dong,Q,Fisk,DG,Nash,R,Sethuraman,A,Weng,S,Cherry,JM.Tetrahymena Genome Database (TGD): a new genomic resource for Tetrahymena thermophila research. Nucleic Acids Research . 2006
  • 10Bhardwaj N,Lu H.Correlation between gene expression profiles and protein-protein interactions within and across genomes. Bioinformatics . 2005

同被引文献122

引证文献5

二级引证文献8

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部