期刊文献+

Assessment of genetic diversity in Dalbergia sissoo clones through RAPD profiling 被引量:2

Assessment of genetic diversity in Dalbergia sissoo clones through RAPD profiling
下载PDF
导出
摘要 We studied the genetic polymorphism among 29 clones of shisham (Dalbergia sissoo Roxb) belonging to different geographic regions using random amplified polymorphic DNA (RAPD) markers. Out of 30 primers used, only 20 primers generated polymorphism in amplified product. In total 232 bands were amplified with 20 primers, of which 192 (82%) were polymorphic with an average of 9.6 bands/primer. The resolving power (Rp) ranged from 2.14 (Primer 5) to 11.93 (Primer 4). Primer 4 and Primer 3 possessed high Rp value. Polymorphism information content (PIC) ranged from 0.15 (Primer 5) to 0.37 (Primer 4). Primer 4 amplified total 18 bands in 29 genotypes with PIC value of 0.37 hence; this set of primer was most informative. The similarity coefficient analysis revealed two clusters. The first cluster comprised of only 10 clones and the second major cluster comprised of 19 clones. The genetic similarity among 29 clones ranged from 25.86% (clone 10 and 235) to 100% (clone 19 and 59), suggesting a wide genetic base in shisham clones. We studied the genetic polymorphism among 29 clones of shisham (Dalbergia sissoo Roxb) belonging to different geographic regions using random amplified polymorphic DNA (RAPD) markers. Out of 30 primers used, only 20 primers generated polymorphism in amplified product. In total 232 bands were amplified with 20 primers, of which 192 (82%) were polymorphic with an average of 9.6 bands/primer. The resolving power (Rp) ranged from 2.14 (Primer 5) to 11.93 (Primer 4). Primer 4 and Primer 3 possessed high Rp value. Polymorphism information content (PIC) ranged from 0.15 (Primer 5) to 0.37 (Primer 4). Primer 4 amplified total 18 bands in 29 genotypes with PIC value of 0.37 hence; this set of primer was most informative. The similarity coefficient analysis revealed two clusters. The first cluster comprised of only 10 clones and the second major cluster comprised of 19 clones. The genetic similarity among 29 clones ranged from 25.86% (clone 10 and 235) to 100% (clone 19 and 59), suggesting a wide genetic base in shisham clones.
出处 《Journal of Forestry Research》 SCIE CAS CSCD 2011年第3期393-397,共5页 林业研究(英文版)
关键词 CLONES clonal seed orchard Dalbergia sissoo RAPD polymorphism information content resolving power clones clonal seed orchard Dalbergia sissoo RAPD polymorphism information content resolving power
  • 相关文献

参考文献13

  • 1Arif M, Zaidi NW, Singh YP, Haq QMR, Singh US. 2009. A comparative analysis of ISSR and RAPD markers for study of genetic diversity in Shisham (Dalbergia sissoo). Plant Mol Biol Reptr, 27: 488--495.
  • 2Chandra A. 2007. Molecular assessment of variation in Stylosanthes fruticosa accessions employing STS and RAPD markers. Japan Mendel Society Cytologia, 72: 251-258.
  • 3Gautam S. 2006. Genetic analysis of various clones of Dalbergia sissoo through morpho-physiological and molecular markers. PhD. Thesis submitted to FRI (Deemed university), Dehradun, India.
  • 4Gautam S, Nautiyal S, Singh US, Sharma TR. 2007. Assessment of genetic diversity among Dalbergia sissoo Roxb. clones of northern India as revealed by RAPD markers. Envis For Bull, 7: 79-82.
  • 5Jaccard P. 1908. Nouvelles researchers Sur la distribution florale. Bull Soc Vaud Sci Nat, 44: 233-270.
  • 6Lynch P, Walsh JB. 1998. Genetics and analysis of quantitative traits. Sunderland, MA: Sinauer Assocs. Inc., p. 980.
  • 7Nanda RM, Nayak S, Rout GR. 2004. Studies on genetic relatedness of Acacia tree species using RAPD markers. Biologia Bratislava, 59: 115-120.
  • 8Prevost A, Wilkinson MJ. 1999. A new system of comparing PCR primers applied to ISSR fingerprinting of potato cultivars. Theoretical and Applied Genetics, 98:107-112.
  • 9Rohlf FJ. 1998. NTSYS-PC Numerical Taxonomy and Multivariate System, version 2.0. New York: Applied Biostatis INC.
  • 10Rout GR, Bhatacharya D, Nanda RM, Nayak S, Das P. 2003. Evaluation of genetic relationships in Dalbergia species using RAPD markers. Biodiversity and Conservation, 12: 197-206.

同被引文献26

引证文献2

二级引证文献8

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部