期刊文献+

人EIF2B4基因一个新的可变剪接产物及其鉴定

A Novel Alternatively Spliced Product from EIF2B4 Gene and its Characterization
下载PDF
导出
摘要 目的对人EIF2B4基因新的可变剪接产物进行鉴定。方法应用长链RT-PCR技术扩增人外周血EIF2B4基因编码区全长序列并进行T克隆及序列测定,用常规RT-PCR对新型可变剪接产物进行验证。结果在EIF2B4基因转录产物中检测出正常变异体2和3(两者只相差3个碱基),同时发现一个外显子7缺失26bp的转录产物。结论利用长链RT-PCR结合T克隆-测序的方法,发现人EIF2B4基因的一个新型可变剪接产物。 Objective To characterize a alternatively spliced product from human EIF2B4 gene.Methods The entire coding sequence of EIF2B4 gene was amplified from total RNA of peripheral blood cells by long distance RT-PCR,products of which were inserted into pGEM-T cloning vector,and multiple alternatively spliced products of the gene were analyzed by sequencing.Results In EIF2B4 gene,both transcript variant 2 and 3 were detected,which were different by 3 base pairs.A novel spliced product with a deletion of 26 bp in exon 7 was also found.This product was further confirmed by conventional RT-PCR.Conclusion A novel spliced product from human EIF2B4 gene was found using long distance RT-PCR,T cloning and sequencing.
出处 《福建医科大学学报》 2012年第1期36-38,共3页 Journal of Fujian Medical University
基金 福建省重点科技项目(2010Y0045)
关键词 剪接体 内含子 真核细胞起始因子2B 基因 逆转录聚合酶链反应 分子 克隆 序列分析 spliceosomes introns eukaryotic initiation factor-2B genes reverse transcriptase polymerase chain reaction cloning molecular sequence analysis
  • 相关文献

参考文献11

  • 1Wang E T,Sandberg R,Luo S,et al.Alternative isoform regulation in human tissue transcriptomes[J].Nature,2008,456(7221):470-476.
  • 2Pan Q,Shai O,Lee L J,et al.Deep surveying of alternative splicing complexity in the human transcriptome by high throughput sequencing[J].Nat Genet,2008,40(12):1413-1415.
  • 3兰风华,李慧忠,卢爱薇,郑德柱,谢飞,朱忠勇.长链RT-PCR在若干遗传病基因突变分析中的应用[J].福建医科大学学报,2003,37(3):256-259. 被引量:5
  • 4vander Knaap M S,Pronk J C,Scheper G C.Vanishing white matter disease[J].Lancet Neurol,2006,5(5):413-423.
  • 5Maletkovic J,Schiffmann R,Gorospe J R,et al.Genetic and clinical heterogeneity in elF2B-related disorder[J].J Child Neurol,2008,23(2):205-215.
  • 6Stamm S,Riethoven J J,Le Texier V,et al.ASD:a bioinformatics resource on alternative splicing[J].Nucleic Acids Res,2006,34:D46-D55.
  • 7Floris M,Raimondo D,Leoni G,et al.MAISTAS:a tool for automatic structural evaluation of alternative splicing products[J].Bioinformatics,2011,27(12):1625-1629.
  • 8Yamamoto M L,Clark T A,Gee S L,et al.Alternative pre-Mrna splicing switches modulate gene expression in late erythropoiesis[J].Blood,2009,113(14):3363-3370.
  • 9Zhu J,Shendure J,Mitra R D,et al.Single molecule proling of alternative pre-mRNA splicing[J].Science,2003,301(5634):836-838.
  • 10Conze T,Gransson J,Razzaghian H R,et al.Single molecule analysis of combinatorial splicing[J].Nucleic Acids Res,2010,38(16):e163.

二级参考文献10

  • 1Liu W,Qian C,Comeau K,et M. Mutant fibrillin-1 monomers lacking EGF-like domains disrupt microfibril assembly and cause severe marfan syndrome[J]. Hum Mol Genet, 1996,5(10),1581-1587.
  • 2Foord OS,Rose EA. Long-distance PCR[J]. PCR Methods Appl, 1994,3(6) :S149-161.
  • 3Mosser J,Douar AM,Sarde CO,et al. Putative X-linked adrenoleukodystrophy gene shares unexpected homology with ABC transporters[J]. Nature, 1993,361: 726-730.
  • 4Tanzi RE, Petrukhin K, Chernov I,et al. The Wilson disease gene is a copper transporting ATPase with homology to the Menkes disease gene[J]. Nat Genet, 1993,5 (4) : 344-349.
  • 5Jenny R J, Pittman DD, Toole J J, et al. Complete cDNA and derived amino acid sequence of human factor V[J]. Proc Natl Acad Sci USA, 1987,84(14):4846-4853.
  • 6The International Human Genome Sequencing Consortium.Initial sequencing and analysis of the human genome[J].Nature, 2001,409(6822) :860-921.
  • 7Sambrook J ,Russell D. Molecular cloning. A laboratory manual[M]. 3rd Ed. New York:Cold Spring Harbor Lab Press,2001.
  • 8Gyllensten UB, Allen M. Sequencing of in vitro amplified DNA[J]. Methods Enzymol, 1993,218: 3-35.
  • 9谢飞,程烽,朱晓辉,宋昌礼,兰风华,朱忠勇.一例遗传性凝血因子Ⅴ缺乏症发病机制研究[J].中华血液学杂志,2001,22(9):453-456. 被引量:12
  • 10吴一波,杨渤生,吴玉水,黄俏佳,兰风华.一例肾上腺脑白质营养不良患者及其家系的基因突变分析[J].上海医学检验杂志,2002,17(2):69-72. 被引量:10

共引文献4

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部