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油橄榄WRKY转录因子的全基因组鉴定与分析 被引量:5

Genome-wide identification and analysis of olive WRKY transcription factor
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摘要 以干旱和水淹胁迫下的‘佛奥’和‘TYZ-1号’2个品种苗木为试材,基于油橄榄全基因组数据,鉴定出106个油橄榄WRKYGQK七肽结构蛋白(WRKY)基因家族成员.利用生物信息学软件进行结构和功能预测,结合油橄榄水分(干旱、水淹)胁迫基因表达谱,分析出7个WRKY转录因子(WRKY14、WRKY51、WRKY77、WRKY91、WRKY66、WRKY1、WRKY92)在‘佛奥’和‘TYZ-1号’中均有高度表达且共同参与干旱和水淹胁迫调控,推测这7个基因可能是油橄榄水分胁迫的主要调节因子.将WRKY蛋白与已知干旱调控的WRKY转录因子构建系统进化树,结果显示,7个与胁迫相关的转录因子中的4个(WRKY14、WRKY51、WRKY91、WRKY92)与已知干旱调控的WRKY基因相似度更高,推测这4个WRKY转录因子可能是参与‘TYZ-1号’干旱调控的主要基因. 106 members of the gene family encoding WRKYGQK heptapeptide structural protein(WRKY) transcription factors were identified based on the genomic data of 2 cultivars of Olea europaea L., ‘Frantoio’ and ‘TYZ-1’, under drought and waterlogging stress. Based on the structure and function of olive WRKY transcription factors predicted using bioinformatics software and the gene expression profile under drought and waterlogging conditions, 7 WRKY transcription factors(WRKY14, WRKY51, WRKY77, WRKY91, WRKY66, WRKY1, and WRKY92) which were highly expressed in ‘Frantoio’ and ‘TYZ-1’ were considered to be the main regulatory factors for olive under water stress. According to the phylogenetic tree of WRKY proteins from olive and Arabidopsis, 4 WRKY(WRKY14, WRKY51, WRKY91, and WRKY92) showed high levels of similarities with Arabidopsis WRKY transcription factors, which were known to be involved under drought stress. Therefore, it can be speculated that the 4 WRKY transcription factors were the main genes involved in drought regulation of ‘TYZ-1’.
作者 王丽娟 王毅 胡青 陆斌 李贤忠 赵川 赵敏 冯发玉 WANG Lijuan;WANG Yi;HU Qing;LU Bin;LI Xianzhong;ZHAO Chuan;ZHAO Min;FENG Fayu(College of Forestry,Southwest Forestry University,Kunming,Yunnan 650224,China;Laboratory of Forest Plant Cultivation and Utilization,Yunnan Academy of Forestry and Grassland Science/Key Laboratory of Rare and Endangered Forest Plants of State Forestry Administration,Kunming,Yunnan 650201,China)
出处 《福建农林大学学报(自然科学版)》 CSCD 北大核心 2021年第6期759-766,共8页 Journal of Fujian Agriculture and Forestry University:Natural Science Edition
基金 中央财政林草技术推广项目(云【2021】TG01号) “十三五”国家重点研发计划项目(2020YFD1000703) 云南省林业和草原科学院创新团队基金项目(LKYTD-2020-001)。
关键词 油橄榄 WRKY转录因子 生物信息学 基因表达谱 水分胁迫 olive WRKY transcription factor bioinformatics gene expression profile water stress
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