摘要
本研究旨在建立一套便携、准确、操作简便的呼吸道病毒核酸快速检测方案。通过实时荧光定量聚合酶链式反应(quantitative real-time polymerase chain reaction,qRT-PCR)验证免提取的呼吸道病毒处理试剂(extraction-free respiratory virus treatment reagent,RTU)对病毒核酸处理的效果以及超快速荧光定量PCR仪(FQ-8A)对核酸扩增的效果;将RTU和FQ-8A结合构建呼吸道病毒核酸快速检测方案,通过荧光定量PCR仪中Ct值判断阳性检出率,以验证该方案检测临床样本时的准确性。结果表明,RTU与全自动核酸提取仪在提取效果上灵敏度相当;RTU在提取不同病毒类型样本时,与其他3种提取方法效果相当,但RTU提取时间少于5 min;FQ-8A检测呼吸道合胞病毒(respiratory syncytial virus,RSV)及腺病毒(adenovirus,ADV)与对照仪器ABI-7500具有良好一致性,kappa系数分别为0.938(P<0.001)和0.887(P<0.001),但FQ-8A耗时更短,扩增时间仅在0.5 h左右;RTU和FQ-8A相结合的快检方案与常规检测方案具有高度一致的检出率,其灵敏度为91.70%,特异度为100%,kappa系数为0.944(P<0.001)。总之,通过RTU与FQ-8A的结合构建了一套可在35 min内完成全部流程的呼吸道病毒核酸快速检测方案。该方案准确性高、操作简便,可为呼吸道病毒快速诊断和治疗提供重要支持。
This study aimed to develop a portable,accurate and easy-to-operate scheme for rapid detection of respiratory virus nucleic acid.Quantitative real-time polymerase chain reaction(qRT-PCR)was used to verify the effect of extraction-free respiratory virus treatment reagent(RTU)on viral nucleic acid treatment and the effect of ultra-fast fluorescence quantitative PCR instrument(FQ-8A)on nucleic acid amplification,respectively.RTU and FQ-8A were combined to develop a rapid detection scheme for respiratory virus nucleic acid,and the positive detection rate was judged by Ct value using a fluorescence quantitative PCR instrument,and the accuracy of the scheme in clinical samples detection was investigated.The results showed that RTU had comparable sensitivity to the automatic nucleic acid extraction instrument,its extraction efficiency was comparable to the other 3 extraction methods when extracting samples of different virus types,but the extraction time of RTU was less than 5 min.FQ-8A had good consistency in detection respiratory syncytial virus(RSV)and adenovirus(ADV)compared with the control instrument ABI-7500,with kappa coefficients of 0.938(P<0.001)and 0.887(P<0.001),respectively,but the amplification time was only about 0.5 h.The RTU and FQ-8A combined rapid detection scheme had a highly consistent detection rate with the conventional detection scheme,with a sensitivity of 91.70%and specificity of 100%,and a kappa coefficient was 0.944(P<0.001).In conclusion,by combining RTU with FQ-8A,a rapid respiratory virus nucleic acid detection scheme was developed,the whole process could be completed in 35 min.The scheme is accurate and easy-to-operate,and can provide important support for the rapid diagnosis and treatment of respiratory virus.
作者
黄媛媛
王宇
周承星
周志超
周炳亮
刘文宽
周荣
曹虹
HUANG Yuanyuan;WANG Yu;ZHOU Chengxing;ZHOU Zhichao;ZHOU Bingliang;LIU Wenkuan;ZHOU Rong;CAO Hong(Guangdong Provincial Key Laboratory of Tropical Disease Research,Department of Microbiology,School of Public Health,Southern Medical University,Guangzhou 510515,Guangdong,China;Guangzhou Laboratory,Guangzhou 510005,Guangdong,China;Department of Radiation Medicine,School of Public Health,Southern Medical University,Guangzhou 510515,Guangdong,China;State Key Laboratory of Respiratory Disease,The First Affiliated Hospital of Guangzhou Medical University,Guangzhou Medical University,Guangzhou 510120,Guangdong,China)
出处
《生物工程学报》
CAS
CSCD
北大核心
2023年第9期3838-3848,共11页
Chinese Journal of Biotechnology
基金
广东省重点领域研发计划项目(2022B1111020003)
广州实验室应急攻关项目(EKPG21-13)。
关键词
呼吸道病毒
快速检测
实时荧光定量聚合酶链式反应
免提取呼吸道病毒处理试剂
respiratory virus
rapid detection
quantitative real-time polymerase chain reaction
extraction-free respiratory virus treatment reagent(RTU)
