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解淀粉欧文氏菌噬菌体Kuerle的分离、基因组测定及其裂解功能分析
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作者 陈妞 余成敏 +5 位作者 崔百明 任彩霞 杨丽颖 董钰 刘琳 郑银英 《中国农业科学》 CAS CSCD 北大核心 2024年第2期295-305,共11页
【背景】解淀粉欧文氏菌(Erwiniaamylovora)是仁果类果树火疫病的病原体,对全球苹果和梨的生产构成严重威胁。随着抗生素耐药菌株的出现,火疫病的防治面临巨大的挑战。【目的】分离一种新的裂解解淀粉欧文氏菌的噬菌体,并分析该噬菌体... 【背景】解淀粉欧文氏菌(Erwiniaamylovora)是仁果类果树火疫病的病原体,对全球苹果和梨的生产构成严重威胁。随着抗生素耐药菌株的出现,火疫病的防治面临巨大的挑战。【目的】分离一种新的裂解解淀粉欧文氏菌的噬菌体,并分析该噬菌体裂解相关基因的功能,为火疫病的防治提供新的选择。【方法】以解淀粉欧文氏菌Ea102为宿主菌,采用双层平板法从流行火疫病的果园土壤中分离噬菌体。通过噬菌斑和透射电镜观察其形态。用PacBio测序技术测定噬菌体基因组,SPAdes组装序列,RAST注释基因组。通过大肠杆菌原核表达系统分析噬菌体Kuerle的裂解机制。【结果】分离纯化出一株裂解解淀粉欧文氏菌的噬菌体,命名为Kuerle。Kuerle由二十面体衣壳的头部和短尾组成,潜伏期约为50 min,裂解量约为240 pfu/cell。噬菌体基因组全长75599 bp,GC含量48.0%,末端有393 bp的重复序列,未发现与溶原调控相关的基因。共预测到85个开放阅读框(open reading frame,ORF),其中33个已知功能蛋白中包含一个由3550 aa组成的巨大病毒颗粒相关的RNA聚合酶(virion-associated RNA polymerase,vRNAP),该vRNAP是Schitoviridae科噬菌体的主要特征之一。病毒粒子和基因结构表明噬菌体Kuerle属于有尾噬菌体类的Schitoviridae科病毒。聚集在DNA晚期表达区的3个裂解相关基因holin、endolysin和spanin组成了“裂解盒”。在大肠杆菌中Kuerle-holin的表达会抑制细胞的生长,而Kuerle-endolysin的表达可裂解细胞。二者共表达时Kuerle-holin会加速Kuerle-endolysin引起的细胞裂解。用叠氮化钠抑制细菌的一般分泌系统(Sec)或Kuerle-endolysin N端信号序列的缺失均会导致endolysin裂解功能丧失。上述结果表明噬菌体Kuerle具有pinholin-SAR endolysin裂解系统。Kuerle-holin(pinholin)使细胞质膜去极化以激活分泌的Kuerle-endolysin(SAR endolysin)降解肽聚糖层。【结论】Kuerle是一株烈性噬菌体并且Kuerle-endolysin抑菌效果显著,为后续火疫病生防试剂的制备提供了理论依据和研究材料。 展开更多
关键词 解淀粉欧文氏菌 噬菌体分离 基因组分析 裂解系统 HOLIN ENDOLYSIN
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痴呆相关病耻感研究进展 被引量:14
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作者 陈妞 陆萍静 +2 位作者 施宇 陈雪梅 孙莹 《中国护理管理》 CSCD 北大核心 2018年第6期853-857,共5页
本文通过对国内外相关文献的回顾,综述痴呆相关病耻感的产生、测量工具、造成的影响及降低痴呆相关病耻感的干预措施,反思现状并结合我国痴呆群体特点,给出降低痴呆相关病耻感的相关建议。
关键词 痴呆 病耻感 文献综述
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ALDH2与乳腺浸润性微乳头状癌新辅助化疗的相关性研究 被引量:1
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作者 付怡如 时倩倩 +2 位作者 牛琛 李帅 付丽 《中国肿瘤临床》 CAS CSCD 北大核心 2021年第23期1201-1207,共7页
目的:检测乳腺浸润性微乳头状癌(invasive micropapillary carcinoma,IMPC)中乙醛脱氢酶2(acetaldehyde dehydrogenase 2,ALDH2)的表达,探讨ALDH2表达水平对IMPC患者新辅助化疗方案的指导意义。方法:选取2009年1月至2014年5月298例于天... 目的:检测乳腺浸润性微乳头状癌(invasive micropapillary carcinoma,IMPC)中乙醛脱氢酶2(acetaldehyde dehydrogenase 2,ALDH2)的表达,探讨ALDH2表达水平对IMPC患者新辅助化疗方案的指导意义。方法:选取2009年1月至2014年5月298例于天津医科大学肿瘤医院行新辅助化疗(neoadjuvant chemotherapy,NAC)的乳腺癌患者的临床病理资料,其中IMPC为84例、浸润性导管癌非特殊型(invasive ductal carcinoma no special type,IDC-NOS)为214例。采用倾向评分匹配法成功匹配84例IMPC与IDC-NOS,检测ALDH2在IMPC组和IDC-NOS组中的表达差异,分析IMPC患者中ALDH2不同表达组的临床病理特征、NAC反应分级与预后相关性。结果:ALDH2在IMPC中的表达水平为48.8%(41/84),显著高于IDC-NOS的33.3%(28/84),两者比较差异具有统计学意义(P=0.041);IMPC患者中ALDH2表达水平与N分期(r_(s)=0.348,P=0.017)及p53突变水平(r_(s)=0.262,P=0.016)呈正相关,与NAC反应分级及无病生存率(disease-free survival,DFS)呈负相关(均P<0.05)。结论:在IMPC中ALDH2高表达且与NAC反应分级及DFS呈负相关。针对ALDH2高表达的IMPC患者应尽早行手术切除,以延长生存预后。 展开更多
关键词 乙醛脱氢酶2 浸润性微乳头状癌 乳腺癌 新辅助化疗
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基于BIM的综合管廊进度管理系统设计与实现 被引量:3
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作者 李青林 孟均 陈妞 《市政技术》 2019年第4期202-204,共3页
分析了基于BIM的工程进度管理实施途径,并以北京世界园艺博览会园区地下综合管廊工程为例,详细阐述了工程的进度管理系统设计与实现。实践证明,基于BIM的综合管廊进度管理系统不仅方便了各专业人员的交流沟通,提高了工作效率,而且促进... 分析了基于BIM的工程进度管理实施途径,并以北京世界园艺博览会园区地下综合管廊工程为例,详细阐述了工程的进度管理系统设计与实现。实践证明,基于BIM的综合管廊进度管理系统不仅方便了各专业人员的交流沟通,提高了工作效率,而且促进整个工程的精细化管理。 展开更多
关键词 BIM 综合管廊 系统 管理
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Diagnostic Accuracy of the Malnutrition Screening Tool (MST) in Adult Cancer Patients: a Systematic Literature Review and Meta-Analysis 被引量:1
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作者 Rena Nakyeyune Xiao Li Ruan +4 位作者 Yi Shen Yi Shao chen niu Zhao Ping Zang Fen Liu 《Journal of Nutritional Oncology》 2021年第1期33-41,共9页
Objective According to literature,cancer patients have the highest incidence of malnutrition among hospital patients(40%-80%).Despite this high prevalence,this condition is still under-diagnosed.The aim of this study ... Objective According to literature,cancer patients have the highest incidence of malnutrition among hospital patients(40%-80%).Despite this high prevalence,this condition is still under-diagnosed.The aim of this study was to conduct a systematic literature review and meta-analysis to assess the diagnostic performance of the Malnutrition Screening Tool(MST),a simple tool that can be applied in a busy setting where a comprehensive assessment at screening would be impractical.Methods PubMed,EMBASE and Cochrane central register of controlled trials were systematically searched to identify records relevant to the research question.The QUADAS-2 was used to assess the quality of each included study and the meta-analysis was conducted using the hierarchical bivariate model in STATA.Results Seven records were included in this study and the overall sensitivity specificity,diagnostic odds ratio(DOR).The pooled sensitivity and specificity generated after the meta-analysis in STATA were 0.78(95%CI:0.64-0.88)and 0.82(95%CI:0.76-0.87),respectively.The corresponding DOR was 16.33(95%CI:7.08-37.67).The positive likelihood ratio(LR+)was+4.39(95%CI:3.02-6.38),and the negative likelihood ratio(LR-)were 0.27(95%CI:0.16-0.47)and the 1/LR-3.72(2.14-6.46).Conclusion These results showed that the MST provides weak diagnostic evidence when used to screen for malnutrition in adult cancer patients. 展开更多
关键词 CANCER MALNUTRITION NUTRITION Malnutrition screening Tool META-ANALYSIS Diagnostic accuracy
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Diffusion tensor imaging and proton magnetic resonance spectroscopy in brain tumor Correlation between structure and metabolism
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作者 Zhigang Min chen niu +2 位作者 Netra Rana Huanmei Ji Ming Zhang 《Neural Regeneration Research》 SCIE CAS CSCD 2013年第10期930-937,共8页
Proton magnetic resonance spectroscopy and diffusion tensor imaging are non-invasive techniques used to detect metabolites and water diffusion in vivo. Previous studies have confirmed a positive correlation of individ... Proton magnetic resonance spectroscopy and diffusion tensor imaging are non-invasive techniques used to detect metabolites and water diffusion in vivo. Previous studies have confirmed a positive correlation of individual fractional anisotropy values with N-acetylaspartate/creatine and N-acetylaspartate/choline ratios in tumors, edema, and normal white matter. This study divided the brain parenchyma into tumor, peritumoral edema, and normal-appearing white matter according to MRI data, and analyzed the correlation of metabolites with water molecular diffusion. Results demonstrated that in normal-appearing white matter, N-acetylaspartate/creatine ratios were positively correlated with fractional anisotropy values, negatively correlated with radial diffusivities, and positively correlated with maximum eigenvalues. Maximum eigenvalues and radial diffusivities in peritumoral edema showed a negative correlation with choline, N-acetylaspartate, and creatine. Radial diffusivities in tumor demonstrated a negative correlation with choline. These data suggest that the relationship between metabolism and structure is markedly changed from normal white matter to peritumoral edema and tumor. Neural metabolism in the peritumoral edema area decreased with expanding extracellular space. The normal relationship of neural function and microstructure disappeared in the tumor region. 展开更多
关键词 磁共振波谱 代谢产物 扩散张量 脑肿瘤 结构 质子 成像 径向扩散系数
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人工智能在危重症护理中的应用现状及挑战 被引量:1
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作者 陈妞 陈莹 +1 位作者 郭瑾 李春朋 《中华急危重症护理杂志》 2022年第3期276-279,共4页
在社会需求、国家政策和数字化创新的共同驱动下,护理服务模式的变革已成为必然趋势。人工智能作为信息技术的一种,是推动医疗行业变革的新兴手段。该文通过综述人工智能在危重症护理领域中的应用现状,介绍人工智能在辅助决策、风险预... 在社会需求、国家政策和数字化创新的共同驱动下,护理服务模式的变革已成为必然趋势。人工智能作为信息技术的一种,是推动医疗行业变革的新兴手段。该文通过综述人工智能在危重症护理领域中的应用现状,介绍人工智能在辅助决策、风险预警、协助护士工作和远程重症监护方面的研究概况,分析其在数据资源标准化建设、护理信息化人才、安全风险和伦理方面面临的挑战,旨在为危重症护理智能化建设的推进提供借鉴。 展开更多
关键词 人工智能 危重病护理 综述文献专题
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Machine learning in materials genome initiative:A review 被引量:16
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作者 Yingli Liu chen niu +4 位作者 Zhuo Wang Yong Gan Yan Zhu Shuhong Sun Tao Shen 《Journal of Materials Science & Technology》 SCIE EI CAS CSCD 2020年第22期113-122,共10页
Discovering new materials with excellent performance is a hot issue in the materials genome initiative.Traditional experiments and calculations often waste large amounts of time and money and are also limited by vario... Discovering new materials with excellent performance is a hot issue in the materials genome initiative.Traditional experiments and calculations often waste large amounts of time and money and are also limited by various conditions. Therefore, it is imperative to develop a new method to accelerate the discovery and design of new materials. In recent years, material discovery and design methods using machine learning have attracted much attention from material experts and have made some progress. This review first outlines available materials database and material data analytics tools and then elaborates on the machine learning algorithms used in materials science. Next, the field of application of machine learning in materials science is summarized, focusing on the aspects of structure determination, performance prediction, fingerprint prediction, and new material discovery. Finally, the review points out the problems of data and machine learning in materials science and points to future research. Using machine learning algorithms, the authors hope to achieve amazing results in material discovery and design. 展开更多
关键词 Materials genome initiative(MGI) Materials database Machine learning Materials properties prediction Materials design and discovery
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