Background Chickens provide globally important livestock products.Understanding the genetic and molecular mechanisms underpinning chicken economic traits is crucial for improving their selective breeding.Influenced by...Background Chickens provide globally important livestock products.Understanding the genetic and molecular mechanisms underpinning chicken economic traits is crucial for improving their selective breeding.Influenced by a combination of genetic and environmental factors,metabolites are the ultimate expression of physiological processes and can provide key insights into livestock economic traits.However,the serum metabolite profile and genetic archi-tecture of the metabolome in chickens have not been well studied.Results Here,comprehensive metabolome detection was performed using non-targeted LC–MS/MS on serum from a chicken advanced intercross line(AIL).In total,7,191 metabolites were used to construct a chicken serum metabo-lomics dataset and to comprehensively characterize the serum metabolism of the chicken AIL population.Regula-tory loci affecting metabolites were identified in a metabolome genome-wide association study(mGWAS).There were 10,061 significant SNPs associated with 253 metabolites that were widely distributed across the entire chicken genome.Many functional genes affect metabolite synthesis,metabolism,and regulation.We highlight the key roles of TDH and AASS in amino acids,and ABCB1 and CD36 in lipids.Conclusions We constructed a chicken serum metabolite dataset containing 7,191 metabolites to provide a refer-ence for future chicken metabolome characterization work.Meanwhile,we used mGWAS to analyze the genetic basis of chicken metabolic traits and metabolites and to improve chicken breeding.展开更多
The current study compares the firm performance in China＇s listed companies by distinguishing the governance controlling of three types of state-shareholder. The results indicate that the performances in firms with d...The current study compares the firm performance in China＇s listed companies by distinguishing the governance controlling of three types of state-shareholder. The results indicate that the performances in firms with direct government controlling are significantly weaker than other firms. In contrast, the performances in firms without direct government controlling are not significantly different. The results suggest that the introduction of market-oriented state-share holders is a desirable process during the transition economy in China.展开更多
RNA base editing is a promising tool in precise molecular therapy. Currently, there are two widely used RNA base editors, REPAIRand RESCUE. REPAIR only facilitates A-to-I conversions, while RESCUE performs both A-to-I...RNA base editing is a promising tool in precise molecular therapy. Currently, there are two widely used RNA base editors, REPAIRand RESCUE. REPAIR only facilitates A-to-I conversions, while RESCUE performs both A-to-I and C-to-U conversions. Thus, RESCUEcan generate twice the number of mutations compared to REPAIR. However, transcription-wide impact due to RESCUE-induced offtarget single-nucleotide variants (SNVs) is not fully appreciated. Therefore, to determine the off-target effects of RESCUE-mediatedediting, we employed transcription-wide sequencing on cells edited by RESCUE. The SNVs showed different off-target effects onmRNA, circRNA, lncRNA, and miRNA expression patterns and their interacting networks. Our results illustrate the transcriptionwide impact of RESCUE-induced off-target SNVs and highlight the need for careful characterization of the off-target impact by thisediting platform.展开更多
基金supported by National Natural Science Foundation of China(No.32172719,U2002205,32272862).
文摘Background Chickens provide globally important livestock products.Understanding the genetic and molecular mechanisms underpinning chicken economic traits is crucial for improving their selective breeding.Influenced by a combination of genetic and environmental factors,metabolites are the ultimate expression of physiological processes and can provide key insights into livestock economic traits.However,the serum metabolite profile and genetic archi-tecture of the metabolome in chickens have not been well studied.Results Here,comprehensive metabolome detection was performed using non-targeted LC–MS/MS on serum from a chicken advanced intercross line(AIL).In total,7,191 metabolites were used to construct a chicken serum metabo-lomics dataset and to comprehensively characterize the serum metabolism of the chicken AIL population.Regula-tory loci affecting metabolites were identified in a metabolome genome-wide association study(mGWAS).There were 10,061 significant SNPs associated with 253 metabolites that were widely distributed across the entire chicken genome.Many functional genes affect metabolite synthesis,metabolism,and regulation.We highlight the key roles of TDH and AASS in amino acids,and ABCB1 and CD36 in lipids.Conclusions We constructed a chicken serum metabolite dataset containing 7,191 metabolites to provide a refer-ence for future chicken metabolome characterization work.Meanwhile,we used mGWAS to analyze the genetic basis of chicken metabolic traits and metabolites and to improve chicken breeding.
文摘The current study compares the firm performance in China＇s listed companies by distinguishing the governance controlling of three types of state-shareholder. The results indicate that the performances in firms with direct government controlling are significantly weaker than other firms. In contrast, the performances in firms without direct government controlling are not significantly different. The results suggest that the introduction of market-oriented state-share holders is a desirable process during the transition economy in China.
基金supported by grants from the Ministry of Agriculture of China(2016ZX08009003-006 and 2011ZX08006-001)the National Key Laboratory Open Fund Project(2020SKLAB6-24)+1 种基金the ZJU-Hangzhou Global Scientific and Technological Innovation Center,Zhejiang University(02020200-K02013008)the National Natural Science Foundation of China(32071347).
文摘RNA base editing is a promising tool in precise molecular therapy. Currently, there are two widely used RNA base editors, REPAIRand RESCUE. REPAIR only facilitates A-to-I conversions, while RESCUE performs both A-to-I and C-to-U conversions. Thus, RESCUEcan generate twice the number of mutations compared to REPAIR. However, transcription-wide impact due to RESCUE-induced offtarget single-nucleotide variants (SNVs) is not fully appreciated. Therefore, to determine the off-target effects of RESCUE-mediatedediting, we employed transcription-wide sequencing on cells edited by RESCUE. The SNVs showed different off-target effects onmRNA, circRNA, lncRNA, and miRNA expression patterns and their interacting networks. Our results illustrate the transcriptionwide impact of RESCUE-induced off-target SNVs and highlight the need for careful characterization of the off-target impact by thisediting platform.
