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Analysis of large datasets for identifying molecular targets in intestinal polyps and metabolic disorders
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作者 SHAN OU YUN XU +6 位作者 QINGLAN LIU TIANWEN YANG WEI CHEN XIU YUAN xin zuo PENG SHI JIE YAO 《BIOCELL》 SCIE 2024年第3期415-429,共15页
Background:The interrelation between intestinal polyps,metabolic syndrome(MetS),and colorectal cancer(CRC)is a critical area of study.This research focuses on pinpointing potential molecular targets to understand the ... Background:The interrelation between intestinal polyps,metabolic syndrome(MetS),and colorectal cancer(CRC)is a critical area of study.This research focuses on pinpointing potential molecular targets to understand the link between intestinal polyp formation,metabolic irregularities,and CRC progression.Methods:We examined clinical samples from patients with intestinal polyps coexisting with MetS and compared them with samples from patients with standard intestinal polyps.Transcriptome sequencing and public database analysis were employed to identify significant pathways and genes.These targets were then validated through immunohistochemistry(IHC).Following the RNA interference of key target expression,a series of experiments,including the cell counting kit-8 assay,colony formation,wound healing,and Transwell assays,were conducted.Results:Comparative analysis revealed 75 up-regulated and 61 down-regulated differentially expressed genes(DEGs)in the MetS polyp group vs.the control.Kyoto encyclopedia of genes and genomes(KEGG)pathway enrichment suggested these DEGs were primarily associated with cell cycle and mitosis.Integration with comparative toxicogenomics database(CTD)and the cancer genome atlas(TCGA)databases highlighted 44 key CRC-related genes.Protein interaction networks indicated connections of purkinje cell protein 4(PCP4),olfactomedin 1(OLFM1),fibronectin 1(FN1),and transforming growth factor beta 3(TGF-β3)with the mitogen-activated protein kinase(MAPK)pathway.Tumor correlation studies suggested higher risk associations with FN1,PCP4,and TGF-β3,while OLFM1 was identified as a lower risk gene.Immunohistochemical analysis revealed a decrease in OLFM1 in MetS-associated intestinal polyps.Upon interference with OLFM1 in polyp epithelial cells,there was a significant enhancement in cell proliferation,colony formation,and cell migration and invasion capabilities.Conclusion:Our study highlights a significant decrease in OLFM1 expression in MetS-associated intestinal polyps.And,this reduction in OLFM1 is associated with enhanced cell proliferation,colony formation,and increased cell migration and invasion capabilities.These findings underscore the reduced OLFM1 expression in MetS-associated intestinal polyps may play a crucial role in promoting tumorigenic processes in colorectal pathology.Further research on OLFM1 may provide valuable insights into understanding and targeting MetS-associated intestinal polyps. 展开更多
关键词 Colorectal cancer Metabolic syndrome Intestinal polyp OLFM1 EXOSOME
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An Innovative Study on the Path of Integrating Curriculum Ideology and Politics in College English Teaching:Taking An Overview of Chinese Culture as an Example
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作者 xin zuo Yafei Chen 《Journal of Contemporary Educational Research》 2023年第12期226-231,共6页
With the rapid development of information technology and the Internet,people can easily and quickly obtain news and information from all over the world.As the state’s requirements for the curriculum ideology and poli... With the rapid development of information technology and the Internet,people can easily and quickly obtain news and information from all over the world.As the state’s requirements for the curriculum ideology and politics are being strengthened,it is necessary to adapt to the needs of the times and integrate ideology and politics into college English teaching.Integration of ideology and politics into teaching is a challenge faced by colleges and universities nowadays,which aims to make ideology and politics alive and well and more acceptable to contemporary college students.In view of this,this paper starts with the importance of the integration of ideology and politics into college English teaching,takes An Overview of Chinese Culture as an example,analyzes new approaches for integrating ideology and politics into the teaching process,and formulates the teaching design centered around these approaches,so as to promote the organic integration of ideology and politics with English teaching. 展开更多
关键词 College English Curriculum ideology and politics English teaching Teaching innovation
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Gender-Specific Multi-Task Micro-Expression Recognition Using Pyramid CGBP-TOP Feature
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作者 Chunlong Hu Jianjun Chen +3 位作者 xin zuo Haitao Zou xing Deng Yucheng Shu 《Computer Modeling in Engineering & Sciences》 SCIE EI 2019年第3期547-559,共13页
Micro-expression recognition has attracted growing research interests in the field of compute vision.However,micro-expression usually lasts a few seconds,thus it is difficult to detect.This paper presents a new framew... Micro-expression recognition has attracted growing research interests in the field of compute vision.However,micro-expression usually lasts a few seconds,thus it is difficult to detect.This paper presents a new framework to recognize micro-expression using pyramid histogram of Centralized Gabor Binary Pattern from Three Orthogonal Panels(CGBP-TOP)which is an extension of Local Gabor Binary Pattern from Three Orthogonal Panels feature.CGBP-TOP performs spatial and temporal analysis to capture the local facial characteristics of micro-expression image sequences.In order to keep more local information of the face,CGBP-TOP is extracted based on pyramid subregions of the micro-expression video frame.The combination of CGBP-TOP and spatial pyramid can represent well and truly the facial movements of the micro-expression image sequences.However,the dimension of our pyramid CGBP-TOP tends to be very high,which may lead to high data redundancy problem.In addition,it is clear that people of different genders usually have different ways of micro-expression.Therefore,in this paper,in order to select the relevant features of micro-expression,the gender-specific sparse multi-task learning method with adaptive regularization term is adopted to learn a compact subset of pyramid CGBP-TOP feature for micro-expression classification of different sexes.Finally,extensive experiments on widely used CASME II and SMIC databases demonstrate that our method can efficiently extract micro-expression motion features in the micro-expression video clip.Moreover,our proposed approach achieves comparable results with the state-of-the-art methods. 展开更多
关键词 Micro-expression recognition FEATURE extraction spatial PYRAMID MULTI-TASK learning REGULARIZATION
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湖北地黄CRISPR/Cas9基因编辑体系的建立
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作者 苗春妍 李铭铭 +5 位作者 左鑫 丁宁 杜家方 李娟 张重义 王丰青 《植物学报》 CAS CSCD 北大核心 2023年第6期905-916,共12页
湖北地黄(Rehmannia henryi)是一种具有重要价值的药用植物,其基因编辑研究还未见报道。为建立湖北地黄基因编辑体系,克隆了类胡萝卜素合成途径中八氢番茄红素脱氢酶(PDS)的编码基因,并构建RhPDS1基因的CRISPR/Cas9载体,以根癌农杆菌介... 湖北地黄(Rehmannia henryi)是一种具有重要价值的药用植物,其基因编辑研究还未见报道。为建立湖北地黄基因编辑体系,克隆了类胡萝卜素合成途径中八氢番茄红素脱氢酶(PDS)的编码基因,并构建RhPDS1基因的CRISPR/Cas9载体,以根癌农杆菌介导法转化湖北地黄基因组。结果表明,RhPDS1转录本含1764 bp的开放阅读框(ORF),其推测的氨基酸序列具有八氢番茄红素脱氢酶的典型结构域。RhPDS1基因在蕾、花和嫩叶中的相对表达量较高。利用基因编辑获得3个具有白化表型的再生株系,白化苗分化率为3.7%。测序结果表明,3个突变体属于2个基因编辑事件,靶点序列分别为1 bp或/和5 bp碱基缺失,造成移码突变。白化苗突变体的叶绿素和类胡萝卜素含量极显著低于野生型,RhPDS1基因的表达量也显著下降。综上,该研究克隆了RhPDS1基因,并利用CRISPR/Cas9技术实现了对RhPDS1基因的靶向敲除,为湖北地黄的功能基因组学研究和野生驯化奠定了技术基础。 展开更多
关键词 湖北地黄 RhPDS1 CRISPR/Cas9 基因敲除
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Developmental changes in lipid and fatty acid metabolism and the inhibition by in ovo feeding oleic acid in Muscovy duck embryogenesis
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作者 Xiufen Zhang Qilin Wu +9 位作者 Wenxuan Zheng Chuang Liu Liang Huang xin zuo Wenquan Xiao Xiaofeng Han Hui Ye Wence Wang Lin Yang Yongwen Zhu 《Animal Nutrition》 SCIE CSCD 2023年第1期321-333,共13页
Hepatic lipid and fatty acid(FA)metabolism are critical for regulating energetic homeostasis during embryogenesis.At present,it remains unclear how an exogenous FA intervention affects embryonic development in an avia... Hepatic lipid and fatty acid(FA)metabolism are critical for regulating energetic homeostasis during embryogenesis.At present,it remains unclear how an exogenous FA intervention affects embryonic development in an avian embryo model.In Exp.1,30 fertilized eggs were sampled on embryonic days(E)16,19,22,25,28,31 and the day of hatch(DOH)to determine the critical period of lipid metabolism.In Exp.2,a total of 120 fertilized eggs were divided into two groups(60 eggs/group)for in ovo feeding(IOF)procedures on E25.Eggs were injected into the yolk sac with PBS as the control group and with oleic acid(OA)as the IOF-OA treatment group.Samples were collected on E28 and E31.In Exp.1,hepatic triacylglycerol(TG)and cholesterol(CHO)contents increased while serum TG content decreased from E16 to DOH(P<0.05).Both serum and liver displayed an increase in unsaturated FA and a decrease in saturated FA(P<0.05).There was a quadratic increase in the target gene and protein expression related to hepatic FA de novo synthesis and oxidation(P<0.05),whose inflection period was between E22 and E28.In Exp.2,compared with the control embryos,IOF-OA embryos had an increased yolk sac TG content on E28 and E31,and a decreased serum TG and CHO content on E28(P<0.05).The IOF-OA embryos had less OA in the yolk sac and liver on E28,and less unsaturated FA in the serum and liver on E31 than did the control embryos(P<0.05).Hepatic gene mRNA expression related to FA uptake,synthesis,and oxidation on E28 was lower in IOF-OA than in control embryos(P<0.05),not on E31(P>0.05).Maximal metabolic changes in lipid and FA metabolism occurred on E22-E28 in Muscovy duck embryogenesis,along with the altered target gene and protein expression related to lipogenesis and lipolysis.IOF-OA intervention on E25 could inhibit the target gene expression related to FA uptake,synthesis,and oxidation,which may influence the normal FA metabolism on E28 during embryogenesis. 展开更多
关键词 EMBRYO LIPID TRIACYLGLYCEROL CHOLESTEROL Fatty acid Oleic acid
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Investigation on mechanical properties and water stability of porous polyurethane concrete 被引量:1
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作者 Jie Yang Hui Li +5 位作者 John Harvey Bing Yang Saifullah Mahmud Yi Zhang xin zuo Yu Tian 《Transportation Safety and Environment》 EI 2021年第4期57-73,共17页
Porous polyurethane concrete(PPUC)is a novel material for permeable pavements and is considered as an alternative to porous asphalt or porous cement concrete.However,studies of the mechanical properties of PPUC are st... Porous polyurethane concrete(PPUC)is a novel material for permeable pavements and is considered as an alternative to porous asphalt or porous cement concrete.However,studies of the mechanical properties of PPUC are still insufficient.In this study,the comprehensive mechanical properties and water stability of PPUC with different gradations and polyurethane dosages were investigated,and its water damage mechanism was preliminarily explored.The results show that the flexural strength and Marshall stability of PPUC can more easily reach the index in the standards of porous cement concrete or porous asphalt,while the compressive strength and abrasion resistance are the weak points of its mechanical properties and need to be further optimized.The mechanical properties and water stability of PPUC were effectively improved by increasing the polyurethane dosage and using continuously graded aggregates.PPUC is more susceptible to water damage because water reacts with the residual isocyanate groups within the polyurethane film to generate carbon dioxide gas,which reduces the cohesion and adhesion performance of polyurethane film.This study provides a comprehensive understanding of the mechanical properties of PPUC and an initial insight into the mechanism of water damage. 展开更多
关键词 porous polyurethane concrete compressive strength flexural strength Marshall stability Cantabro loss water stability
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