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Is 26S proteasome non-ATPase regulatory subunit 6 a potential molecular target for intrahepatic cholangiocarcinoma?
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作者 Yong-Zhi Zhuang Li-Quan Tong Xue-Ying Sun 《World Journal of Hepatology》 2024年第11期1219-1224,共6页
In this editorial we comment on the article by Tang et al published in the recent issue of World Journal of Hepatology.Drug therapy of intrahepatic cholangiocarcinoma(iCCA)poses an enormous challenge since only a smal... In this editorial we comment on the article by Tang et al published in the recent issue of World Journal of Hepatology.Drug therapy of intrahepatic cholangiocarcinoma(iCCA)poses an enormous challenge since only a small proportion of patients demonstrate beneficial responses to therapeutic agents.Thus,there has been a sustained search for novel molecular targets for iCCA.The study by Tang et al evaluated the role of 26S proteasome non-ATPase regulatory subunit 6(PSMD6),a 19S regulatory subunit of the proteasome,in human iCCA cells and specimens.The authors employed clustered regularly interspaced short palindromic repeat(CRISPR)knockout screening technology integrated with the computational CERES algorithm,and analyzed the human protein atlas(THPA)database and tissue microarrays.The results show that PSMD6 is a gene essential for the proliferation of 17 iCCA cell lines,and PSMD6 protein was overexpressed in iCCA tissues without a significant correlation with the clinicopathological parameters.The authors conclude that PSMD6 may play a promoting role in iCCA.The major limitations and defects of this study are the lack of detailed information of CRISPR knockout screening,in vivo experiments,and a discussion of plausible mechanistic cues,which,therefore,dampen the significance of the results.Further studies are required to verify PSMD6 as a molecular target for developing novel therapeutics for iCCA.In addition,the editorial article summarizes the latest advances in molecular targeted drugs and recently emerging immunotherapy in the clinical management of iCCA,development of proteasome inhibitors for cancer therapy,and advantages of CRISPR screening technology,computational methods,and THPA database as experimental tools for fighting cancer.We hope that these comments may provide some clues for those engaged in the field of basic and clinical research into iCCA. 展开更多
关键词 CHOLANGIOCARCINOMA 26s proteasome non-ATPase regulatory subunit 6 Molecular targeted therapies proteasome inhibitors Clustered regularly interspaced short palindromic repeat
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Overexpression of proteasome 26S subunit non-ATPase 6 protein and its clinicopathological significance in intrahepatic cholangiocarcinoma 被引量:1
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作者 Zhong-Qing Tang Yu-Lu Tang +4 位作者 Kai Qin Qi Li Gang Chen Yu-Bin Huang Jian-Jun Li 《World Journal of Hepatology》 2024年第11期1282-1289,共8页
BACKGROUND Currently,intrahepatic cholangiocarcinoma(ICC)poses a continuing,significant health challenge,but the relationship has yet to be established between ICC and the proteasome 26S subunit non-ATPase 6(PSMD6).AI... BACKGROUND Currently,intrahepatic cholangiocarcinoma(ICC)poses a continuing,significant health challenge,but the relationship has yet to be established between ICC and the proteasome 26S subunit non-ATPase 6(PSMD6).AIM To investigate the protein expression and clinicopathological significance of PSMD6 in ICC.METHODS The potential impact of the PSMD6 gene on the growth of ICC cell lines was analyzed using clustered regularly interspaced short palindromic repeat knockout screening technology.Forty-two paired specimens of ICC and adjacent noncancerous tissues were collected.PSMD6 protein expression was determined by immunohistochemistry.Receiver operating characteristic curve analysis was performed to validate PSMD6 expression level,and its association with ICC patients’various clinicopathological characteristics was investigated.RESULTS The PSMD6 gene was found to be essential for the growth of ICC cell lines.PSMD6 protein was significantly overexpressed in ICC tissues(P<0.001),but showed no significant association with patient age,gender,pathological grade,or tumor-node-metastasis stage(P>0.05).CONCLUSION PSMD6 can promote the growth of ICC cells,thus playing a pro-oncogenic role. 展开更多
关键词 Intrahepatic cholangiocarcinoma proteasome 26s subunit non-ATPase 6 Immunohistochemistry Clustered regularly interspaced short palindromic repeat knockout screening Clinicopathological characteristics
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PUB22 and PUB23 U-box E3 ubiquitin ligases negatively regulate 26S proteasome activity under proteotoxic stress conditions 被引量:2
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作者 Min Yong Ahn Dong Hye Seo Woo Taek Kim 《Journal of Integrative Plant Biology》 SCIE CAS CSCD 2022年第3期625-631,共7页
The mechanism regulating proteasomal activity under proteotoxic stress conditions remains unclear.Here,we showed that arsenite-induced proteotoxic stress resulted in upregulation of Arabidopsis homologous PUB22 and PU... The mechanism regulating proteasomal activity under proteotoxic stress conditions remains unclear.Here,we showed that arsenite-induced proteotoxic stress resulted in upregulation of Arabidopsis homologous PUB22 and PUB23 U-boxE3 ubiquitin ligases and that pub22 pub23 double mutants displayed arsenite-insensitive seed germination and root growth phenotypes.PUB22/PUB23 downregulated 26 S proteasome activity by promoting the dissociation of the 19 S regulatory particle from the holo-proteasome complex,resulting in intracellular accumulation of UbG76 VGFP,an artificial substrate of the proteasome complex,and insoluble poly-ubiquitinated proteins.These results suggest that PUB22/PUB23 play a critical role in arsenite-induced proteotoxic stress response via negative regulation of 26 S proteasome integrity. 展开更多
关键词 Arabidopsis thaliana proteotoxic stress sodium arsenite U-box E3 ligases PUB22/23 26s proteasome complex
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Cryo-EM structure of the plant 26S proteasome
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作者 Susanne Kandolf Irina Grishkovskaya +11 位作者 Katarina Belacic Derek L.Bolhuis Sascha Amann Brent Foster Richard Imre Karl Mechtler Alexander Schleiffer Hemant D.Tagare Ellen D.Zhong Anton Meinhart Nicholas G.Brown David Haselbach 《Plant Communications》 SCIE 2022年第3期116-126,共11页
Targeted proteolysis is a hallmark of life.It is especially important in long-lived cells that can be found in higher eukaryotes,like plants.This task is mainly fulfilled by the ubiquitin–proteasome system.Thus,prote... Targeted proteolysis is a hallmark of life.It is especially important in long-lived cells that can be found in higher eukaryotes,like plants.This task is mainly fulfilled by the ubiquitin–proteasome system.Thus,proteolysis by the 26S proteasome is vital to development,immunity,and cell division.Although the yeast and animal proteasomes are well characterized,there is only limited information on the plant proteasome.We determined the first plant 26S proteasome structure from Spinacia oleracea by single-particle electron cryogenic microscopy at an overall resolution of 3.3 A°.We found an almost identical overall architecture of the spinach proteasome compared with the known structures from mammals and yeast.Nevertheless,we noticed a structural difference in the proteolytic active b1 subunit.Furthermore,we uncovered an unseen compression state by characterizing the proteasome’s conformational landscape.We suspect that this new conformation of the 20S core protease,in correlation with a partial opening of the unoccupied gate,may contribute to peptide release after proteolysis.Our data provide a structural basis for the plant proteasome,which is crucial for further studies. 展开更多
关键词 26s proteasome SPINACH UPS CRYO-EM conformational landscape
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Implication of altered proteasome function in alcoholic liverinjury 被引量:10
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作者 Natalia A Osna Terrence M Donohue Jr 《World Journal of Gastroenterology》 SCIE CAS CSCD 2007年第37期4931-4937,共7页
The proteasome is a major protein-degrading enzyme, which catalyzes degradation of oxidized and aged proteins, signal transduction factors and cleaves peptides for antigen presentation. Proteasome exists in the equili... The proteasome is a major protein-degrading enzyme, which catalyzes degradation of oxidized and aged proteins, signal transduction factors and cleaves peptides for antigen presentation. Proteasome exists in the equilibrium of 26S and 20S particles. Proteasome function is altered by ethanol metabolism, depending on oxidative stress levels: low oxidative stress induces proteasome activity, while high oxidative stress reduces it. The proposed mechanisms for modulation of proteasome activity are related to oxidative modification of proteasomal proteins with primary and secondary products derived from ethanol oxidation. Decreased proteolysis by the proteasome results in the accumulation of insoluble protein aggregates, which cannot be degraded by proteasome and which further inhibit proteasome function. Mallory bodies, a common signature of alcoholic liver diseases, are formed by liver cells, when proteasome is unable to remove cytokeratins. Proteasome inhibition by ethanol also promotes the accumulation of pro-apoptotic factors in mitochondria of ethanol-metabolizing liver cells that are normally degraded by proteasome. In addition, decreased proteasome function also induces accumulation of the negative regulators of cytokine signaling (I-~B and SOCS), thereby blocking cytokine signal transduction. Finally, ethanol-elicited blockade of interferon type 2 and 2 signaling and decreased proteasome function impairs generation of peptides for MHC class Ⅰ-restricted antigen presentation. 展开更多
关键词 20S proteasome 26s proteasome PA28 CYP2E1 Apoptosis Liver
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A converged ubiquitin-proteasome pathway for the degradation of TOC and TOM tail-anchored receptors
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作者 Meijing Yang Shuai Chen +7 位作者 Shey-Li Lim Lang Yang Jia Yi Zhong Koon Chuen Chan Zhizhu Zhao Kam-Bo Wong Junqi Wang Boon Leong Lim 《Journal of Integrative Plant Biology》 SCIE CAS CSCD 2024年第5期1007-1023,共17页
In plants,thousands of nucleus-encoded proteins translated in the cytosol are sorted to chloroplasts and mitochondria by binding to specific receptors of the TOC(translocon on the outer chloroplast membrane)and the TO... In plants,thousands of nucleus-encoded proteins translated in the cytosol are sorted to chloroplasts and mitochondria by binding to specific receptors of the TOC(translocon on the outer chloroplast membrane)and the TOM(translocon on the outer mitochondrial membrane)complexes for import into those organelles.The degradation pathways for these receptors are unclear.Here,we discovered a converged ubiquitin-proteasome pathway for the degradation of Arabidopsis thaliana TOC and TOM tail-anchored receptors.The receptors are ubiquitinated by E3 ligase(s)and pulled from the outer membranes by the AAA+adenosine triphosphatase CDC48,after which a previously uncharacterized cytosolic protein,transmembrane domain(TMD)-binding protein for tail-anchored outer membrane proteins(TTOP),binds to the exposed TMDs at the C termini of the receptors and CDC48,and delivers these complexes to the 26S proteasome. 展开更多
关键词 26s proteasome CDC48 SP1 TOC TOM UBIQUITINATION
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The proteasome activator subunit PSME1 promotes HBV replication by inhibiting the degradation of HBV core protein
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作者 Yu Liu Jiaxin Yang +4 位作者 Yanyan Wang Qiqi Zeng Yao Fan Ailong Huang Hui Fan 《Genes & Diseases》 SCIE CSCD 2024年第6期395-408,共14页
Chronic hepatitis B virus(HBV)infection is a leading cause of liver cirrhosis and he-patocellular carcinoma,representing a global health problem for which a functional cure is difficult to achieve.The HBV core protein... Chronic hepatitis B virus(HBV)infection is a leading cause of liver cirrhosis and he-patocellular carcinoma,representing a global health problem for which a functional cure is difficult to achieve.The HBV core protein(HBc)is essential for multiple steps in the viral life cycle.It is the building block of the nucleocapsid in which viral DNA reverse transcription oc-curs,and its mediation role in viral-host cell interactions is critical to HBV infection persis-tence.However,systematic studies targeting HBc-interacting proteins remain lacking.Here,we combined HBc with the APEX2 to systematically identify HBc-related host proteins in living cells.Using functional screening,we confirmed that proteasome activator subunit 1(PSME1)is a potent HBV-associated host factor.PSME1 expression was up-regulated upon HBV infection,and the protein level of HBc decreased after PSME1 knockdown.Mechanistically,the interac-tion between PSME1 and HBc inhibited the degradation of HBc by the 26S proteasome,thereby improving the stability of the HBc protein.Furthermore,PSME1 silencing inhibits HBV tran-scription in the HBV infection system.Our findings reveal an important mechanism by which PSME1 regulates HBc proteins and may facilitate the development of new antiviral therapies targeting PSME1 function. 展开更多
关键词 26s proteasome APEX2 HBC HBV Host-viral interactions PSME1
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Recent advances in identification of male specificity determinant and its function in S-RNase-mediated gametophytic self-incompatibility
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作者 张琳 谭晓风 乌云塔娜 《Journal of Forestry Research》 SCIE CAS CSCD 2006年第2期124-128,共5页
S-RNase-mediated gametophytic self-incompatibility (GSI) is controlled by a multiallelic S-locus at which two separate genes, the female (pistil) and male (pollen) specificity determinants, are tightly linked. T... S-RNase-mediated gametophytic self-incompatibility (GSI) is controlled by a multiallelic S-locus at which two separate genes, the female (pistil) and male (pollen) specificity determinants, are tightly linked. This review described both the identification of pollen specific F-box genes, SLF/SFBs, in Antirrhinum, Petunia and Prunus species and the demonstration of SLF/SFB as pollen determinant together with their functions in GSI response. Recent studies of how the pollen determinant functions in pollination reaction revealed that pollen determinant interacted with S-RNases in a non-allele-specific manner. It targeted all of the non-self S-RNases for ubiquitination through a functional SCF complex and subsequent degradation via 26S proteasome pathway in compatible reaction. It allows pollen tube to reach into the embryo sac and to finish double fertilization. In incompatible response, the intact self S-RNases were left to function as a cytotoxin that degrades self-pollen tube RNA, resulting in the cessation of pollen tube growth. 展开更多
关键词 Gametophytic self-incompatibility Pollen specific F-box genes Male determinant SCF complex 26s proteasome pathway
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How does conserved dopamine neurotrophic factor protect against and rescue neurodegeneration of PC12 cells? 被引量:3
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作者 Jia-ming Mei Chao-shi Niu 《Neural Regeneration Research》 SCIE CAS CSCD 2017年第7期1145-1151,共7页
Conserved dopamine neurotrophic factor protects and rescues dopaminergic neurodegeneration induced by 6-hydroxydopamine in vivo,but its potential value in treating Parkinson's disease remains controversial.Here,we us... Conserved dopamine neurotrophic factor protects and rescues dopaminergic neurodegeneration induced by 6-hydroxydopamine in vivo,but its potential value in treating Parkinson's disease remains controversial.Here,we used the proteasome inhibitors lactacystin and MG132 to induce neurodegeneration of PC12 cells.Afterwards,conserved dopamine neurotrophic factor was administrated as a therapeutic factor,both pretreatment and posttreatment.Our results showed that(1)conserved dopamine neurotrophic factor enhanced lactacystin/MG132-induced cell viability and morphology,and attenuated alpha-synuclein accumulation in differentiated PC12 cells.(2)Enzyme linked immunosorbent assay showed up-regulated 26S proteasomal activity in MG132-induced PC12 cells after pre-and posttreatment with conserved dopamine neurotrophic factor.Similarly,26S proteasome activity was upregulated in lactacystin-induced PC12 cells pretreated with conserved dopamine neurotrophic factor.(3)With regard proteolytic enzymes(specifically,glutamyl peptide hydrolase,chymotrypsin,and trypsin),glutamyl peptide hydrolase activity was up-regulated in lactacystin/MG132-administered PC12 cells after pre-and posttreatment with conserved dopamine neurotrophic factor.However,upregulation of chymotrypsin activity was only observed in MG132-administered PC12 cells pretreated with conserved dopamine neurotrophic factor.There was no change in trypsin expression.We conclude that conserved dopamine neurotrophic factor develops its neurotrophic effects by modulating proteasomal activities,and thereby protects and rescues PC12 cells against neurodegeneration. 展开更多
关键词 nerve regeneration conserved dopamine neurotrophic factor Parkinson's disease proteasomal inhibitor 26s proteasome alphasynuclein LACTACYSTIN MG-132 glutamyl peptide hydrolase CHYMOTRYPSIN trypsin neural regeneration
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Bortezomib effect on E2F and cyclin family members in human hepatocellular carcinoma cell lines 被引量:1
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作者 Daniele Baiz Barbara Dapas +7 位作者 Rossella Farra Bruna Scaggiante Gabriele Pozzato Fabrizio Zanconati Nicola Fiotti Lara Consoloni Sara Chiaretti Gabriele Grassi 《World Journal of Gastroenterology》 SCIE CAS 2014年第3期795-803,共9页
AIM: To evaluate the effects of the proteasome inhibitor bortezomib (BZB) on E2Fs and related genes in hepatocellular carcinoma (HCC) cells.
关键词 BORTEZOMIB CYCLINS E2F family Hepatocellular carcinoma Liver MICROARRAY 26s proteasome
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Emerging Role of the Ubiquitin Proteasome System in the Control of Shoot Apical Meristem Function 被引量:2
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作者 Elisabetta Di Giacomo Giovanna Serino Giovanna Frugis 《Journal of Integrative Plant Biology》 SCIE CAS CSCD 2013年第1期7-20,共14页
The shoot apical meristem (SAM) is a population of undifferentiated cells at the tip of the shoot axis that establishes early during plant embryogenesis and gives rise to all shoot organs throughout the plant's lif... The shoot apical meristem (SAM) is a population of undifferentiated cells at the tip of the shoot axis that establishes early during plant embryogenesis and gives rise to all shoot organs throughout the plant's life. A plethora of different families of transcription factors (TFs) play a key role in establishing the equilibrium between cell differentiation and stem cell maintenance in the SAM. Fine tuning of these regulatory proteins is crucial for a proper and fast SAM response to environmental and hormonal cues, and for development progression. One effective way to rapidly inactivate TFs involves regulated proteolysis by the ubiquitin/26S proteasome system (UPS). However, a possible role of UPS-dependent protein degradation in the regulation of key SAM TFs has not been thoroughly investigated. Here, we summarize recent evidence supporting a role for the UPS in SAM maintenance and function. We integrate this survey with an in silico analysis of publicly-available microarray databases which identified ubiquitin ligases that are expressed in specific areas within the SAM, suggesting that they may regulate or act downstream of meristem-specific factors. 展开更多
关键词 Arabidopsis thaliana cell differentiation protein degradation shoot apical meristem ubiquitin/26s proteasome system.
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A CK2-RNF4 interplay coordinates non-canonical SUMOylation and degradation of nuclear receptor FXR 被引量:2
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作者 Stephanie Bilodeau Veronique Caron +2 位作者 Jonathan Gagnon Alexandre Kuftedjian Andre Tremblay 《Journal of Molecular Cell Biology》 SCIE CAS CSCD 2017年第3期195-208,共14页
Farnesoid X receptor (FXR) is a ligand-activated nuclear receptor that plays a central role in regulating genes involved in bile acid homeostasis, and fat and glucose metabolism. Here, we demonstrate a post-translat... Farnesoid X receptor (FXR) is a ligand-activated nuclear receptor that plays a central role in regulating genes involved in bile acid homeostasis, and fat and glucose metabolism. Here, we demonstrate a post-translational interplay between FXR phosphoryl- ation, SUMOylation, and ubiquitination that directs the receptor into an activation-degradation pathway in hepatocytes. We iden- tify a non-canonical SUMOylation motif termed pSuM that conjugates SUM02 at Lys-325 of FXR under the direct control of casein kinase 2 (CK2), which provides the required negative charge for Ubc9 and PIAS1 to perform SUMOylation, by phosphorylating Ser-327. Lys-325 SUMOylation is indispensable to the promotion of efficient ligand activation and transcriptional coactivation of FXR. Constitutive pSuM activation using a phospho-mimic Ser-327 mutant or catalytic CK2 expression strongly induces SUM02 conjugation, which directs FXR ubiquitination and proteasome-dependent degradation. We also determine that such SUMOylation-dependent ubiquitination of FXR is mediated by the E3 ubiquitin ligase RNF4, which is required to achieve maximal induction of FXR and optimal up- or downregulation of responsive genes involved in bile acid homeostasis and liver regeneration. Our findings identify a highly regulated atypical SUMO conjugation motif that serves to coordinate FXR transcriptional compe- tence, thereby expanding the intricate dynamics of the SUMOylation process used by incoming signals to govern metabolic gene regulation. 展开更多
关键词 farnesoid receptor SUMOYLATION UBIQUITINATION 26s proteasome bile acid
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