缺氧诱导因子(hypoxia-inducible factor, HIF)与肝细胞癌的发生发展相关。HIF-1α在包括肝细胞癌在内的多种癌症类型的发生发展中发挥着重要作用,但其在肝细胞癌中的靶基因尚未完全确定。为找到HIF-1α在肝癌中新的致癌靶点,通过整合HI...缺氧诱导因子(hypoxia-inducible factor, HIF)与肝细胞癌的发生发展相关。HIF-1α在包括肝细胞癌在内的多种癌症类型的发生发展中发挥着重要作用,但其在肝细胞癌中的靶基因尚未完全确定。为找到HIF-1α在肝癌中新的致癌靶点,通过整合HIF-1α敲除的RNA-seq数据,HIF-1α的ChIP-Seq数据,HIF-1α在肝癌中的共表达基因,以及肝癌相关的GEO(Gene Expression Omnibus)数据集,寻找HIF-1α的潜在靶基因。通过分析TCGA(The Cancer Genome Atlas)肝癌数据库、GEO和HPA(Human Protein Atlas)数据集,研究HIF-1α与ATP2C1的相关性,ATP2C1在肝癌中的表达及预后。通过建立物理和化学(氯化钴)缺氧模型验证ATP2C1与低氧及HIF-1α的关系。通过GO(Gene Ontology),KEGG(Kyoto Encyclopedia of Genes and Genomes)和GSEA(Gene Set Enrichment Analysis)分析探索ATP2C1的生物学功能。通过设计体外实验证实ATP2C1对HCC的作用。利用STRING和BioGRID两个蛋白互作在线数据库获得ATP2C1的互作蛋白,并研究其在肝癌中的表达及相关性。通过整合及筛选数据,ATP2C1被鉴定为一个HIF-1α的潜在靶基因。ATP2C1与HIF-1α高度相关,在肝细胞癌中高表达,且伴随有不良预后。富集分析与体外实验的结果表明ATP2C1参与调控HCC细胞的增殖迁移。蛋白互作数据表明ATP2C1与TMEM165存在互作关系,生存分析表明TMEM1651高表达的肝癌患者预后较差。相关性分析的结果显示ATP2C1与肝癌中TMEM165和MMP2的表达高度相关,表明ATP2C1可能与TMEM165和MMP2存在互作关系,并参与了肝癌的进展过程。结果表明,ATP2C1是HIF-1α的靶基因和肝细胞癌的生物标志物,其敲低抑制了HCC的增殖和迁移。展开更多
Objective:To explore and analyze the expression and clinical significance of vascular endothelial growth factor(VEGF),hypoxia-inducible factor 1α(HIF-1α),and metabolic indicators in esophageal squamous cell carcinom...Objective:To explore and analyze the expression and clinical significance of vascular endothelial growth factor(VEGF),hypoxia-inducible factor 1α(HIF-1α),and metabolic indicators in esophageal squamous cell carcinoma(ESCC).Methods:Sixty ESCC patients admitted to the hospital from October 2021 to October 2023 were selected as the ESCC group.Sixty normal healthy patients from the same period were chosen as the control group.Their serum samples and tissue samples were collected.Metabolic indicators of all study subjects were obtained based on the basic biochemical results upon admission.RT-PCR was utilized to detect the expression of VEGF and HIF-1αin ESCC tissues.Results:The expression of VEGF and HIF-1αin the ESCC T3+T4 group was significantly higher than that of the carcinoma in situ(Tis)group,T1+T2 group,and control group.Furthermore,the expression of HIF-1αwas found to be related to the expression of VEGF,showing a significant correlation between the quantities.Significant differences in the levels of metabolic indicators were observed between the ESCC group and the control group(P<0.05).Conclusion:Metabolic indicators are associated with the onset of ESCC in patients.Abnormal lipid metabolism plays a crucial role in the occurrence and development of tumors.The expression of VEGF and HIF-1αin ESCC tissues significantly correlates with the tumor stage,providing a new reference for the diagnosis and treatment of ESCC.展开更多
文摘缺氧诱导因子(hypoxia-inducible factor, HIF)与肝细胞癌的发生发展相关。HIF-1α在包括肝细胞癌在内的多种癌症类型的发生发展中发挥着重要作用,但其在肝细胞癌中的靶基因尚未完全确定。为找到HIF-1α在肝癌中新的致癌靶点,通过整合HIF-1α敲除的RNA-seq数据,HIF-1α的ChIP-Seq数据,HIF-1α在肝癌中的共表达基因,以及肝癌相关的GEO(Gene Expression Omnibus)数据集,寻找HIF-1α的潜在靶基因。通过分析TCGA(The Cancer Genome Atlas)肝癌数据库、GEO和HPA(Human Protein Atlas)数据集,研究HIF-1α与ATP2C1的相关性,ATP2C1在肝癌中的表达及预后。通过建立物理和化学(氯化钴)缺氧模型验证ATP2C1与低氧及HIF-1α的关系。通过GO(Gene Ontology),KEGG(Kyoto Encyclopedia of Genes and Genomes)和GSEA(Gene Set Enrichment Analysis)分析探索ATP2C1的生物学功能。通过设计体外实验证实ATP2C1对HCC的作用。利用STRING和BioGRID两个蛋白互作在线数据库获得ATP2C1的互作蛋白,并研究其在肝癌中的表达及相关性。通过整合及筛选数据,ATP2C1被鉴定为一个HIF-1α的潜在靶基因。ATP2C1与HIF-1α高度相关,在肝细胞癌中高表达,且伴随有不良预后。富集分析与体外实验的结果表明ATP2C1参与调控HCC细胞的增殖迁移。蛋白互作数据表明ATP2C1与TMEM165存在互作关系,生存分析表明TMEM1651高表达的肝癌患者预后较差。相关性分析的结果显示ATP2C1与肝癌中TMEM165和MMP2的表达高度相关,表明ATP2C1可能与TMEM165和MMP2存在互作关系,并参与了肝癌的进展过程。结果表明,ATP2C1是HIF-1α的靶基因和肝细胞癌的生物标志物,其敲低抑制了HCC的增殖和迁移。
文摘Objective:To explore and analyze the expression and clinical significance of vascular endothelial growth factor(VEGF),hypoxia-inducible factor 1α(HIF-1α),and metabolic indicators in esophageal squamous cell carcinoma(ESCC).Methods:Sixty ESCC patients admitted to the hospital from October 2021 to October 2023 were selected as the ESCC group.Sixty normal healthy patients from the same period were chosen as the control group.Their serum samples and tissue samples were collected.Metabolic indicators of all study subjects were obtained based on the basic biochemical results upon admission.RT-PCR was utilized to detect the expression of VEGF and HIF-1αin ESCC tissues.Results:The expression of VEGF and HIF-1αin the ESCC T3+T4 group was significantly higher than that of the carcinoma in situ(Tis)group,T1+T2 group,and control group.Furthermore,the expression of HIF-1αwas found to be related to the expression of VEGF,showing a significant correlation between the quantities.Significant differences in the levels of metabolic indicators were observed between the ESCC group and the control group(P<0.05).Conclusion:Metabolic indicators are associated with the onset of ESCC in patients.Abnormal lipid metabolism plays a crucial role in the occurrence and development of tumors.The expression of VEGF and HIF-1αin ESCC tissues significantly correlates with the tumor stage,providing a new reference for the diagnosis and treatment of ESCC.
