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Wilm′s tumor gene1肽疫苗Galinpepimut-S在肿瘤免疫治疗中的应用
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作者 高娜 梁平 +3 位作者 单彬 高亚乾 尹金妥 冯锐 《中国药业》 2024年第3期128-128,I0001-I0004,共5页
目的为Wilm′s tumor gene1(WT1)肽疫苗Galinpepimut-S(GPS)用于肿瘤免疫治疗的后续研究提供参考。方法采用计算机检索中国知网、PubMed等数据库自建库起至2022年12月的肿瘤免疫治疗相关文献,总结GPS在肿瘤免疫治疗中的应用现状。结果GP... 目的为Wilm′s tumor gene1(WT1)肽疫苗Galinpepimut-S(GPS)用于肿瘤免疫治疗的后续研究提供参考。方法采用计算机检索中国知网、PubMed等数据库自建库起至2022年12月的肿瘤免疫治疗相关文献,总结GPS在肿瘤免疫治疗中的应用现状。结果GPS能激发自身免疫系统,对WT1抗原产生强烈免疫反应而发挥抗肿瘤作用,在卵巢癌、恶性胸膜间皮瘤、急性髓系白血病、多发性骨髓瘤的治疗中均显示出较好的疗效。结论以GPS为代表的肿瘤疫苗是未来肿瘤治疗的重要方向,需进一步进行临床研究,以获取更多数据。 展开更多
关键词 Wilm′s tumor gene1肽疫苗 Galinpepimut-s 免疫治疗 新生抗原 肿瘤疫苗
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Genetic and epigenetic targets of natural dietary compounds as anti-Alzheimer's agents 被引量:2
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作者 Willian Orlando Castillo-Ordoñez Nohelia Cajas-Salazar Mayra Alejandra Velasco-Reyes 《Neural Regeneration Research》 SCIE CAS CSCD 2024年第4期846-854,共9页
Alzheimer’s disease is a progressive neurodegenerative disorder and the most common cause of dementia that principally affects older adults.Pathogenic factors,such as oxidative stress,an increase in acetylcholinester... Alzheimer’s disease is a progressive neurodegenerative disorder and the most common cause of dementia that principally affects older adults.Pathogenic factors,such as oxidative stress,an increase in acetylcholinesterase activity,mitochondrial dysfunction,genotoxicity,and neuroinflammation are present in this syndrome,which leads to neurodegeneration.Neurodegenerative pathologies such as Alzheimer’s disease are considered late-onset diseases caused by the complex combination of genetic,epigenetic,and environmental factors.There are two main types of Alzheimer’s disease,known as familial Alzheimer’s disease(onset<65 years)and late-onset or sporadic Alzheimer’s disease(onset≥65 years).Patients with familial Alzheimer’s disease inherit the disease due to rare mutations on the amyloid precursor protein(APP),presenilin 1 and 2(PSEN1 and PSEN2)genes in an autosomaldominantly fashion with closely 100%penetrance.In contrast,a different picture seems to emerge for sporadic Alzheimer’s disease,which exhibits numerous non-Mendelian anomalies suggesting an epigenetic component in its etiology.Importantly,the fundamental pathophysiological mechanisms driving Alzheimer’s disease are interfaced with epigenetic dysregulation.However,the dynamic nature of epigenetics seems to open up new avenues and hope in regenerative neurogenesis to improve brain repair in Alzheimer’s disease or following injury or stroke in humans.In recent years,there has been an increase in interest in using natural products for the treatment of neurodegenerative illnesses such as Alzheimer’s disease.Through epigenetic mechanisms,such as DNA methylation,non-coding RNAs,histone modification,and chromatin conformation regulation,natural compounds appear to exert neuroprotective effects.While we do not purport to cover every in this work,we do attempt to illustrate how various phytochemical compounds regulate the epigenetic effects of a few Alzheimer’s disease-related genes. 展开更多
关键词 Alzheimer’s disease EPIgeneTICs genes METHYLATION natural products
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Morphogenesis and Molecular Phylogeny of a Marine Urostylid Ciliate Apokeronopsis wrighti(Protista, Ciliophora, Hypotrichia)
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作者 LIAN Chunyu LI Ping +1 位作者 ZHANG Tengteng SHAO Chen 《Journal of Ocean University of China》 SCIE CAS CSCD 2024年第4期1067-1075,共9页
Hypotrichs are one of the highly differentiated ciliated lineages which play important roles in ecological, environmental,evolutionary and basic biological studies. In the present study, we investigated the living cha... Hypotrichs are one of the highly differentiated ciliated lineages which play important roles in ecological, environmental,evolutionary and basic biological studies. In the present study, we investigated the living characteristics, infraciliature, nuclear apparatus, ontogenesis and phylogenetic position of a marine hypotrichous ciliate, Apokeronopsis wrighti Long et al., 2008, which was isolated from coastal waters in Shenzhen, China. The new isolate resembles the type population in terms of morphological characteristics, morphometrics, and SSU rRNA gene sequence that is with a 99.7% similarity. Ontogenesis of A. wrighti is characterized by oral primordium for the proter as well as marginal and dorsal kineties anlagen in both filial products formed de novo, and the cirral row arranged along the paroral and endoral arises from several anterior frontoventral-transverse cirral streaks. Phylogenetic analyses based on SSU and concatenated gene data suggest that five species of Apokeronopsis form a monophyletic clade, and the genus Apokeronopsis is closely related to Thigmokeronopsis and Metaurostylopsis. 展开更多
关键词 18s rRNA gene Apokeronopsis ciliated protists multi-gene ONTOgenesIs systematics Urostylida
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To Analyze the Sensitivity of RT-PCR Assays Employing S Gene Target Failure with Whole Genome Sequencing Data during Third Wave by SARS-CoV-2 Omicron Variant
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作者 Pooja Patel Yogita Mistry +1 位作者 Monika Patel Summaiya Mullan 《Advances in Microbiology》 CAS 2024年第5期247-255,共9页
Introduction: Omicron is a highly divergent variant of concern (VOCs) of a severe acute respiratory syndrome SARS-CoV-2. It carries a high number of mutations in its spike protein hence;it is more transmissible in the... Introduction: Omicron is a highly divergent variant of concern (VOCs) of a severe acute respiratory syndrome SARS-CoV-2. It carries a high number of mutations in its spike protein hence;it is more transmissible in the community by immune evasion mechanisms. Due to mutation within S gene, most Omicron variants have reported S gene target failure (SGTF) with some commercially available PCR kits. Such diagnostic features can be used as markers to screen Omicron. However, Whole Genome Sequencing (WGS) is the only gold standard approach to confirm novel microorganisms at genetically level as similar mutations can also be found in other variants that are circulating at low frequencies worldwide. This Retrospective study is aimed to assess RT-PCR sensitivity in the detection of S gene target failure in comparison with whole genome sequencing to detect variants of Omicron. Methods: We have analysed retrospective data of SARS-CoV-2 positive RT-PCR samples for S gene target failure (SGTF) with TaqPath COVID-19 RT-PCR Combo Kit (ThermoFisher) and combined with sequencing technologies to study the emerged pattern of SARS-CoV-2 variants during third wave at the tertiary care centre, Surat. Results: From the first day of December 2021 till the end of February 2022, a total of 321,803 diagnostic RT-PCR tests for SARS-CoV-2 were performed, of which 20,566 positive cases were reported at our tertiary care centre with an average cumulative positivity of 6.39% over a period of three months. In the month of December 21 samples characterized by the SGTF (70/129) were suggestive of being infected by the Omicron variant and identified as Omicron (B.1.1.529 lineage) when sequence. In the month of January, we analysed a subset of samples (n = 618) with SGTF (24%) and without SGTF (76%) with Ct values Conclusions: During the COVID-19 pandemic, it took almost more than 15 days to diagnose infection and identify pathogen by sequencing technology. In contrast to that molecular assay provided quick identification with the help of SGTF phenomenon within 5 hours of duration. This strategy helps scientists and health policymakers for the quick isolation and identification of clusters. That ultimately results in a decreased transmission of pathogen among the community. 展开更多
关键词 sARs-CoV-2 s gene Target Failure Whole Genome sequencing Omicron
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The autophagy-lysosome pathway:a potential target in the chemical and gene therapeutic strategies for Parkinson’s disease
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作者 Fengjuan Jiao Lingyan Meng +1 位作者 Kang Du Xuezhi Li 《Neural Regeneration Research》 SCIE CAS 2025年第1期139-158,共20页
Parkinson’s disease is a common neurodegenerative disease with movement disorders associated with the intracytoplasmic deposition of aggregate proteins such asα-synuclein in neurons.As one of the major intracellular... Parkinson’s disease is a common neurodegenerative disease with movement disorders associated with the intracytoplasmic deposition of aggregate proteins such asα-synuclein in neurons.As one of the major intracellular degradation pathways,the autophagy-lysosome pathway plays an important role in eliminating these proteins.Accumulating evidence has shown that upregulation of the autophagy-lysosome pathway may contribute to the clearance ofα-synuclein aggregates and protect against degeneration of dopaminergic neurons in Parkinson’s disease.Moreover,multiple genes associated with the pathogenesis of Parkinson’s disease are intimately linked to alterations in the autophagy-lysosome pathway.Thus,this pathway appears to be a promising therapeutic target for treatment of Parkinson’s disease.In this review,we briefly introduce the machinery of autophagy.Then,we provide a description of the effects of Parkinson’s disease–related genes on the autophagy-lysosome pathway.Finally,we highlight the potential chemical and genetic therapeutic strategies targeting the autophagy–lysosome pathway and their applications in Parkinson’s disease. 展开更多
关键词 AUTOPHAGY chemical therapy gene therapy Parkinson’s disease Α-sYNUCLEIN
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献血者HBVs基因变异的生物信息学分析
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作者 范加诚 李青 +2 位作者 陈秀丽 刘世香 陈烨 《中国输血杂志》 CAS 2024年第8期933-939,共7页
目的分析HBV DNA+/HBsAg-献血者的传染性指标、S区基因序列突变情况及生物信息学特征变化。方法通过PCR方法筛查出1份HBV DNA+/HBsAg-的标本,应用酶联免疫和化学发光方法检测该标本乙肝病毒5项指标,对该标本HBVs区基因片段测序并分析变... 目的分析HBV DNA+/HBsAg-献血者的传染性指标、S区基因序列突变情况及生物信息学特征变化。方法通过PCR方法筛查出1份HBV DNA+/HBsAg-的标本,应用酶联免疫和化学发光方法检测该标本乙肝病毒5项指标,对该标本HBVs区基因片段测序并分析变异情况,应用分析软件对所测序列进行生物信息学分析。结果该标本HBV DNA+、HBsAg-、HBsAb+、HBeAg+、HBeAb-、HBcAb+;HBVs区基因序列内发生氨基酸单位点突变(P151L),空间结构发生改变。结论HBVs区基因序列空间结构改变,可能是导致检测结果出现血清学HBsAg-/HBsAb+/HBV DNA+的原因。 展开更多
关键词 HBV OBI s基因 献血者 生物信息学
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基于CD-BSMOTE的D-S证据融合变压器故障诊断
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作者 鲁玲 高诚 +3 位作者 熊威 龚康 马辉 张鑫 《水电能源科学》 北大核心 2024年第5期192-196,共5页
针对变压器油中溶解气体数据集不均衡特性对故障诊断结果的影响,提出一种基于清除临界点改进的边界合成少数类过采样算法均衡数据集和Pearson冲突距离改进D-S证据融合的变压器故障诊断模型。首先,对少数类样本进行均衡化处理,根据K-mean... 针对变压器油中溶解气体数据集不均衡特性对故障诊断结果的影响,提出一种基于清除临界点改进的边界合成少数类过采样算法均衡数据集和Pearson冲突距离改进D-S证据融合的变压器故障诊断模型。首先,对少数类样本进行均衡化处理,根据K-means聚类结果清除处于临界位置的样本;其次,搭建梯度提升树、随机森林、BP神经网络的故障诊断模型,实现变压器故障初步诊断;接着引入Pearson冲突距离改进D-S证据融合模型,实现诊断结果的融合决策;最后,经实际算例分析,诊断精确率达到92.65%。结果表明,所建模型能有效解决数据不平衡对诊断结果的影响,提高故障诊断精度。 展开更多
关键词 故障诊断 油中溶解气体分析 边界合成少数类过采样 Pearson冲突距离 D-s证据融合
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Nanotechnology-based gene therapy as a credible tool in the treatment of Alzheimer’s disease 被引量:5
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作者 Aziz Unnisa Nigel H.Greig Mohammad Amjad Kamal 《Neural Regeneration Research》 SCIE CAS CSCD 2023年第10期2127-2133,共7页
Toxic aggregated amyloid-βaccumulation is a key pathogenic event in Alzheimer’s disease.Treatment approaches have focused on the suppression,deferral,or dispersion of amyloid-βfibers and plaques.Gene therapy has ev... Toxic aggregated amyloid-βaccumulation is a key pathogenic event in Alzheimer’s disease.Treatment approaches have focused on the suppression,deferral,or dispersion of amyloid-βfibers and plaques.Gene therapy has evolved as a potential therapeutic option for treating Alzheimer’s disease,owing to its rapid advancement over the recent decade.Small interfering ribonucleic acid has recently garnered considerable attention in gene therapy owing to its ability to down-regulate genes with high sequence specificity and an almost limitless number of therapeutic targets,including those that were once considered undruggable.However,lackluster cellular uptake and the destabilization of small interfering ribonucleic acid in its biological environment restrict its therapeutic application,necessitating the development of a vector that can safeguard the genetic material from early destruction within the bloodstream while effectively delivering therapeutic genes across the bloodbrain barrier.Nanotechnology has emerged as a possible solution,and several delivery systems utilizing nanoparticles have been shown to bypass key challenges regarding small interfering ribonucleic acid delivery.By reducing the enzymatic breakdown of genetic components,nanomaterials as gene carriers have considerably enhanced the efficiency of gene therapy.Liposomes,polymeric nanoparticles,magnetic nanoparticles,dendrimers,and micelles are examples of nanocarriers that have been designed,and each has its own set of features.Furthermore,recent advances in the specific delivery of neurotrophic compounds via gene therapy have provided promising results in relation to augmenting cognitive abilities.In this paper,we highlight the use of different nanocarriers in targeted gene delivery and small interfering ribonucleic acid-mediated gene silencing as a potential platform for treating Alzheimer’s disease. 展开更多
关键词 Alzheimer’s disease amyloid-β BACE1 gene silencing gene therapy nanoparticle NEUROTROPHINs small interfering ribonucleic acid
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Eukaryotic food sources analysis in situ of tropical common sea cucumber Holothuria leucospilota based on 18S rRNA gene high-throughput sequencing 被引量:1
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作者 Yue ZHANG Fei GAO +3 位作者 Qiang XU Yanan WANG Haiqing WANG Aimin WANG 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2023年第3期1173-1186,共14页
Sea cucumber Holothuria leucospilota is one of the most widespread tropical holothurian species.In this study,eukaryotic organism composition in foregut and hindgut contents of H.leucospilota and surrounding sediments... Sea cucumber Holothuria leucospilota is one of the most widespread tropical holothurian species.In this study,eukaryotic organism composition in foregut and hindgut contents of H.leucospilota and surrounding sediments was assessed by 18S rRNA gene high-throughput sequencing.Eukaryon richness and diversity in the habitat sediments were significantly higher than those in foregut and hindgut contents of the sea cucumbers(P<0.05).The foregut content group,hindgut content group,and marine sediment group sequences were respectively assigned to 18.20±1.32,19.40±1.03,and 21.80±0.37 phyla.In the foregut contents,Nematoda(20.18%±9.59%),Mollusca(16.12%±10.49%),Chlorophyta(10.04%±4.85%),Annelida(8.72%±10.93%),Streptophyta(8.46%±4.65%),and Diatomea(5.99%±2.01%)were the predominant phyla,which showed the eukaryotic food sources of H.leucospilota were primarily belong to the above phyla.The predominant phyla in the hindgut contents were Streptophyta(45.55%±17.32%),Mollusca(4.93%±4.82%),Arthropoda(5.37%±3.08%),Diatomea(3.88%±2.34%),and Chlorophyta(3.79%±1.59%);and Annelida(37.80%±17.00%),Arthropoda(24.49%±12.53%),Platyhelminthes(7.14%±3.02%),Nematoda(4.14%±0.91%),and Diatomea(5.11%±1.35%)had large contents in the sediments.The comparatively high content of Paris genus in phylum Streptophyta in foregut contents indicated that land plants were one of the primary food sources of H.leucospilota,however the significantly higher contents of Streptophyta in hindgut contents than that in foregut contents might suggest a large part of the terrigenous detritus ingested might not be digested by H.leucospilota.UPGMA and PCoA analysis revealed that eukaryotic organism composition differed significantly between foregut contents of H.leucospilota and ambient sediments,indicating selective feeding feature of H.leucospilota.This study provided useful references for artificial feed of tropical sea cucumbers and enhanced understanding of the ecological roles of detritus-feeding macrobenthos. 展开更多
关键词 Holothuria leucospilota food source 18s rRNA gene gut content sEDIMENT
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Genetic Analysis of Major and Minor Gene(s) Resistant to Stripe Rust in Important Resource Wheat Line Jinghe891-1 被引量:1
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作者 XU Shi-chang, ZHANG Jing-yuan, ZHAO Wen-sheng, WU Li-ren ZHANG Ji-xin and YUAN Zhen-dong( Institute of Plant Protection , Chinese Academy of Agricultural Sciences , Beijing 100094 , P. R . China Institute of Crop Science, Beijing Academy of Agricultural and Forestry Science, Beijing 100089 , P. R . China ) 《Agricultural Sciences in China》 CAS CSCD 2002年第4期364-369,共6页
Inheritance of line Jinghe891-l resistant to pathotype of Puccinia striiformis in two patterns of temperature (Normal: day 18℃ /night 10℃ , High: day 24℃ /night 15℃ )was studied in this paper. The results showed t... Inheritance of line Jinghe891-l resistant to pathotype of Puccinia striiformis in two patterns of temperature (Normal: day 18℃ /night 10℃ , High: day 24℃ /night 15℃ )was studied in this paper. The results showed that there were at least two pairs of dominant major genes and one pair of recessive minor genes in Jinghe 891-1. The two pairs of major genes that conferred resistance to CY31 were allelic or linked closely with resistance gene in Jubilejna Ⅱ , Kangyin655 and T. spelta Album. They were novel resistance genes and were inherited in a repeated or independent mode. The minor genes, which could modify the major genes, were sensitive to temperature and conferred resistance to all pathotypes of Puccinia striiformis in China. It is recommended that this line can be used as an important resource stock. 展开更多
关键词 WHEAT Wheat resistance to Puccinia striiformis Major gene(s) minor gene(s) genetic analysis
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2016年~2022年福建地区猪流行性腹泻病毒S基因的遗传变异分析 被引量:18
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作者 李雨琪 许静茹 +12 位作者 郑欣 黄林洁 周娴静 朱智豪 陈芳婷 邓莹滋 蔡思思 靳雨欣 刘璐 董波 戴爱玲 李晓冰 范克伟 《中国预防兽医学报》 CAS CSCD 北大核心 2024年第1期84-91,共8页
为了解2016年~2022年福建地区猪流行性腹泻病毒(PEDV)流行现状及遗传变异情况,本研究对从福建地区采集的231份疑似猪流行性腹泻(PED)发病仔猪病料样品经RT-PCR进行PEDV的检测,选取不同地区22份PEDV阳性样品经PCR扩增S基因并测序,采用Meg... 为了解2016年~2022年福建地区猪流行性腹泻病毒(PEDV)流行现状及遗传变异情况,本研究对从福建地区采集的231份疑似猪流行性腹泻(PED)发病仔猪病料样品经RT-PCR进行PEDV的检测,选取不同地区22份PEDV阳性样品经PCR扩增S基因并测序,采用MegAlign分析PEDV S基因及其编码氨基酸序列的相似性,采用MEGA7.0软件构建其系统发育树,采用MegAlign分析S基因编码氨基酸序列的分子特征,分别利用RDP4、SimPlot、MEGA7.0软件进行S基因的重组分析,并利用BEAST软件进行该基因分歧时间估算。结果显示,福建地区PEDV总阳性率为51.51%(119/231),福建5个不同地区PEDV阳性率为40.00%~63.16%。从22份PEDV阳性样品中获得19条PEDV S基因序列,全长4149 bp~4161 bp,共编码1382 aa~1386 aa,19株PEDV S基因序列及其编码氨基酸序列之间相似性分别为94.4%~100%和93.8%~100%。19株PEDV S基因系统发育分析结果显示,其中18株PEDV属于GIIb亚型,1株属于GIb亚型。S蛋白氨基酸序列分析结果显示,与经典疫苗株CV777相比,18株GIIb亚型PEDV S蛋白的氨基酸序列在aa55~aa56、aa135~aa136和aa155~aa156处存在插入与缺失,具有典型的PEDV变异株的分子特征;其中14株还出现了独特的aa1193缺失。与GII型疫苗株AJ1102相比,19株PEDV S1区氨基酸突变率为60.00%~83.82%,其中18株GIIb亚型PEDV S1区氨基酸突变位点中有10个位于S蛋白重要结构域;基因重组分析结果显示,有3株PEDV S基因存在重组事件,其中FJLY01-2018株由GD-B株和CH-S株重组而来,FJLY02-2018株由CH/HNPJ/2017株和PEDV4-S-3株重组而来,FJLY03-2022株由PEDV-1931-1-Valladolid-Molpeceres株和HUA-M17株重组而来;S基因分歧时间估算结果显示,福建地区GIIa亚型、GIIb亚型、GIa亚型及GIb亚型PEDV的最早分歧时间约为1995年、2009年、2010年和2011年。上述结果表明福建地区PEDV流行率较高,田间流行株基因型具有多样性,且存在重组现象,临床上应予以高度重视。本研究为福建地区PED的流行病学调查及免疫防控提供了参考。 展开更多
关键词 猪流行性腹泻病毒 s基因 遗传变异 基因重组 分歧时间
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Hybrid Feature Selection Method for Predicting Alzheimer’s Disease Using Gene Expression Data
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作者 Aliaa El-Gawady BenBella S.Tawfik Mohamed A.Makhlouf 《Computers, Materials & Continua》 SCIE EI 2023年第3期5559-5572,共14页
Gene expression(GE)classification is a research trend as it has been used to diagnose and prognosis many diseases.Employing machine learning(ML)in the prediction of many diseases based on GE data has been a flourishin... Gene expression(GE)classification is a research trend as it has been used to diagnose and prognosis many diseases.Employing machine learning(ML)in the prediction of many diseases based on GE data has been a flourishing research area.However,some diseases,like Alzheimer’s disease(AD),have not received considerable attention,probably owing to data scarcity obstacles.In this work,we shed light on the prediction of AD from GE data accurately using ML.Our approach consists of four phases:preprocessing,gene selection(GS),classification,and performance validation.In the preprocessing phase,gene columns are preprocessed identically.In the GS phase,a hybrid filtering method and embedded method are used.In the classification phase,three ML models are implemented using the bare minimum of the chosen genes obtained from the previous phase.The final phase is to validate the performance of these classifiers using different metrics.The crux of this article is to select the most informative genes from the hybrid method,and the best ML technique to predict AD using this minimal set of genes.Five different datasets are used to achieve our goal.We predict AD with impressive values forMultiLayer Perceptron(MLP)classifier which has the best performance metrics in four datasets,and the Support Vector Machine(SVM)achieves the highest performance values in only one dataset.We assessed the classifiers using sevenmetrics;and received impressive results,allowing for a credible performance rating.The metrics values we obtain in our study lie in the range[.97,.99]for the accuracy(Acc),[.97,.99]for F1-score,[.94,.98]for kappa index,[.97,.99]for area under curve(AUC),[.95,1]for precision,[.98,.99]for sensitivity(recall),and[.98,1]for specificity.With these results,the proposed approach outperforms recent interesting results.With these results,the proposed approach outperforms recent interesting results. 展开更多
关键词 gene expression gene selection machine learning CLAssIFICATION Alzheimer’s disease
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欧李种质资源自交不亲和S-RNase基因的克隆及序列分析
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作者 郭夕雯 穆霄鹏 +3 位作者 王鹏飞 张建成 张帅 杜俊杰 《中国果树》 2024年第2期38-43,共6页
为鉴定不同欧李种质资源的S基因型,分析欧李S基因序列特点,以70份欧李种质为材料,通过PCR特异性扩增S基因,并克隆测序得到其基因序列。结果表明:利用BFP93/BFP94-1引物,在52份种质中各鉴定到2个S基因,在16份种质中各鉴定到单个S基因,在3... 为鉴定不同欧李种质资源的S基因型,分析欧李S基因序列特点,以70份欧李种质为材料,通过PCR特异性扩增S基因,并克隆测序得到其基因序列。结果表明:利用BFP93/BFP94-1引物,在52份种质中各鉴定到2个S基因,在16份种质中各鉴定到单个S基因,在3-32-扁黄和10-32两份种质中未扩增出条带;共克隆得到120条基因,鉴定得到36种S基因型,并将其中的新基因登录到NCBI中,登录号依次为OQ124075~OQ124109。 展开更多
关键词 欧李 s基因 自交不亲和 特异性引物
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A sulfotransferase gene BnSOT-like1 has a minor genetic effect on seed glucosinolate content in Brassica napus 被引量:1
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作者 Yangming Wang Shubei Wan +3 位作者 Hao Fan Mao Yang Weiyan Li Rongzhan Guan 《The Crop Journal》 SCIE CAS CSCD 2020年第5期855-865,共11页
The theory and associated selection methods of classical quantitative genetics are based on the multifactorial or polygene hypothesis.Major genes or quantitative trait loci(QTL)in modern quantitative genetics based o... The theory and associated selection methods of classical quantitative genetics are based on the multifactorial or polygene hypothesis.Major genes or quantitative trait loci(QTL)in modern quantitative genetics based on a“major gene plus polygenes”genetic system have been paid much attention in genetic studies.However,it remains unclear how the numerous minor genes act,although the polygene theory has sustained genetic improvement in plants and animals for more than a hundred years.In the present study,we identified a novel minor gene,BnSOT-like1(BnaA09g53490D),which is a sulfotransferase(SOT)gene catalyzing the formation of the core glucosinolate(GSL)structure in Brassica napus.This gene has been occasionally found during investigations of plant height-related genes,but has not been identified by QTL mapping because of its small phenotypic effects on GSL content.The overexpression of BnSOT-like1 up-regulated the expression of aliphatic GSL-associated genes,leading to a high seed aliphatic GSL content,and the overexpression of the allelic gene Bnsot-like1 did not increase seed GSL content.These findings suggest that the SOT gene has a marked effect on a quantitative trait from a reverse genetics standpoint,but a minor effect on the quantitative trait in its natural biological state.Because of the redundancy of GSL biosynthetic genes in the allotetraploid species B.napus,mutations of a single functional gene in the pathway will not result in significant phenotypic changes,and that the genes in biosynthetic pathways such as BnSOT-like1 in our study have minor effects and may be called polygenes in contrast to the reported three regulatory genes(BnHAG1s)which strongly affect GSL content in B.napus.The present study has shed light on a minor gene for a quantitative trait. 展开更多
关键词 Brassica napus Glucosinolate content minor gene sULFOTRANsFERAsE ICIM
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Combining ability and gene action studies for yield and fibre traits in Gossypium arboreum using Griffings numerical and Haymans graphical approach
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作者 SUKRUTHA Bhimireddy RAJESWARI Sivakami +3 位作者 PREMALATHA N. BOOPATHI Narayana Manikanda THIRUKUMARAN K. MANIVANNAN A. 《Journal of Cotton Research》 CAS 2023年第3期141-156,共16页
Background For the purpose of utilising hybrid vigour to produce possible hybrids with a suitable level of stability,the knowledge of gene activity and combining ability is a crucial prerequisite before choosing desir... Background For the purpose of utilising hybrid vigour to produce possible hybrids with a suitable level of stability,the knowledge of gene activity and combining ability is a crucial prerequisite before choosing desirable parents.The present study was carried out with six parents crossed in full diallel fashion and generated 30 F1 hybrids.These hybrids were evaluated in two replications in Randomized Block Design at Department of Cotton,TNAU for combining ability and gene action.Diallel analysis was carried out according to Griffing’s method-I(parents + F_(1) + reciprocals) and model-I and Hayman’s graphical approach by using INDOSTAT software.Results Analysis of variance for combining ability indicated that mean square values of GCA,SCA and reciprocals were highly significant for all the traits except for the uniformity index.RG763 and K12 showed highly positively significant GCA effects for most of the yield traits while PA838 and K12 for fibre quality traits,so they were found as best general combiners.PAIG379 × K12 and PDB29 × K12 for yield traits,and PDB29 × PA838,RG763 × PA838,and CNA1007 × RG763 cross combinations for fibre quality traits could be recommended for future breeding programms.Conclusion The results of both Griffing’s and Hayman’s approaches showed that non-additive gene action predominates as SCA variance was bigger than GCA variance,so heterosis breeding is thought to be a more fruitful option for enhancing GCA of many traits. 展开更多
关键词 gene action Combining ability Diallel analysis Hayman’s approach Griffing’s approach Vr-Wr graph Desi cotton
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PROS1基因新同义突变致以脑梗死起病的遗传性蛋白S缺陷症家系调查
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作者 赵瑾莹 潘蓉蓉 +4 位作者 金慧慧 刘春梅 黄婷 张颖冬 田有勇 《临床神经病学杂志》 CAS 2024年第3期184-187,共4页
目的调查一个以急性脑梗死起病的遗传性蛋白S缺陷症家系的临床特征,分析其PROS1基因的突变特点。方法收集先证者及其直系亲属的临床资料,采集血标本,检测蛋白S活性水平并对PROS1基因进行测序。结果该家系直系亲属三代8人,其中3名确诊为... 目的调查一个以急性脑梗死起病的遗传性蛋白S缺陷症家系的临床特征,分析其PROS1基因的突变特点。方法收集先证者及其直系亲属的临床资料,采集血标本,检测蛋白S活性水平并对PROS1基因进行测序。结果该家系直系亲属三代8人,其中3名确诊为遗传性蛋白S缺陷症,先证者及其兄均表现为急性脑梗死,余家系成员尚未发生血栓事件。检测蛋白S活性:先证者、先证者之兄、先证者母亲分别为16.8%、38.0%、31.8%,父亲正常。基因分析发现先证者、先证者之兄、先证者母亲PROS1基因第11外显子均存在c.1323G>A杂合变异,父亲为野生型。结论本家系为一个新发现的由PROS1基因c.1323G>A同义突变引起的遗传性蛋白S缺陷症家系;此突变可能导致青年缺血性脑卒中的发生。 展开更多
关键词 青年缺血性脑卒中 PROs1基因 同义突变 遗传性蛋白s缺陷症
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Presymptomatic Diagnosis and Gene Therapy for Alzheimer’s Disease: Genomic, Therapeutic, and Ethical Aspects—A Systematic Review
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作者 Théodora M. Zohoncon Joseph Sawadogo +9 位作者 Abdoul Karim Ouattara Abdou Azaque Zoure Marie N. L. Ouedraogo Paul Ouedraogo Florencia W. Djigma Christelle W. M. Nadembèga Raphael Kabore Djénéba Ouermi Dorcas Obiri-Yeboah Jacques Simpore 《Advances in Alzheimer's Disease》 2023年第4期55-74,共20页
Over the past three decades, genomic and epigenetic sciences have identified more than 70 genes involved in the molecular pathophysiology of Alzheimer’s disease (AD). DNA methylation, abnormal histone and chromatin r... Over the past three decades, genomic and epigenetic sciences have identified more than 70 genes involved in the molecular pathophysiology of Alzheimer’s disease (AD). DNA methylation, abnormal histone and chromatin regulation and the action of various miRNAs induce AD. The identification of mutated genes has paved the way for the development of diagnostic kits and the initiation of gene therapy trials. However, despite major advances in neuroscience research, there is yet no suitable treatment for AD. Therefore, the early diagnosis of this neurodegenerative disease raises several ethical questions, including the balance between the principle of non-maleficence and the principle of beneficence. The aims of this research were to present the genomic and ethical aspects of AD, and to highlight the ethical principles involved in its presymptomatic diagnosis and therapy. A systematic review of the literature in PubMed, Google Scholar and Science Direct was carried out to outline the genomic aspects and ethical principles relating not only to the presymptomatic diagnosis of AD, but also to its gene therapy. A total of 16 publications were selected. AD is a multifactorial disease that can be genetically classified into Sporadic Alzheimer’s Disease and Familial Alzheimer’s Disease based on family history. Gene therapy targeting specific disease-causing genes is a promising therapeutic strategy. Advancements in artificial intelligence applications may enable the prediction of AD onset several years in advance. While early diagnosis of AD may empower patients with full decision competence for early decision-making, it also carries implications for the patient’s family members, who are at risk of developing the disease, potentially becoming a source of confusion or anxiety. AD has a significant impact on the life of individuals at risk and their families. Given the absence of disease modifying therapy, genetic screening and early diagnosis for this condition raise ethical issues that must be carefully considered in the context of fundamental bioethical principles, including autonomy, beneficence, non-maleficence, and justice. 展开更多
关键词 Neurodegenerative Diseases Alzheimer’s Disease Molecular Mechanism gene Therapy Presymptomatic Diagnosis Ethics gene Therapy Ethics
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16S rRNA Gene-Based Metagenomic Analysis of Soil Bacterial Diversity in Brazzaville, Republic of the Congo
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作者 Irène Marie Cécile Mboukou Kimbatsa Itsouhou Ngô +4 位作者 Armel Ibala Zamba Faly Armel Soloka Mabika Thantique Moutali Lingouangou Joseph Goma-Tchimbakala Etienne Nguimbi 《Advances in Microbiology》 2023年第9期477-498,共22页
Soil contains a great diversity of microorganisms, among which are bacteria. This study aimed to explore bacterial diversity in soil samples in Brazzaville in the Republic of the Congo. Environmental DNA was extracted... Soil contains a great diversity of microorganisms, among which are bacteria. This study aimed to explore bacterial diversity in soil samples in Brazzaville in the Republic of the Congo. Environmental DNA was extracted. The illumina MiSeq sequencing was held and the diversity indices have been computed. Illumina MiSeq sequencing revealed 21 Phyla, four of which were abundant: Proteobacteria, Acidobacteria, Actinobacteria and Bacteroidetes. Soil microbial communities in the studied samples were phylogenetically diverse but with a stable community structure. 17 classes are represented with relative abundances of Rihzobiales, Bacillales, Actinomycetales and Acidobacteriales. 40 families, the Alphaproteobacteria, the Bacilli and the 12 Actinobacteria. 83 orders among which the Rhizobiales are the most abundant followed by Bacillales and the least abundant followed by the Flavobacteriaceae. Of the 28 genera listed, the Bradyrhizobium is the most dominant in Mw3 and Mw4. 25 listed species, Bradyrhizobium, Bacillus, Actinoplanes, and Candidatu coribacter Acidobacterium are the most abundant species. The Shannon indices of Mw3 and Mw4 are equal, the H’max of Mw4 is greater than the H’max of Mw3. The Simpson index of Mw4 is equal to the Simpson index of Mw3, and the Pielou index (J) of Mw4 is less than the R of Mw3, but very close. This study opens interesting perspectives on the knowledge and exploitation of telluric bacteria in several areas of life. 展开更多
关键词 METAGENOMIC sequencing 16s rRNA gene sOIL Bacteria
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帕金森病患者血清LCN2、PROS1水平变化及其与疾病分期、认知障碍的相关性
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作者 单树崇 吴召军 何清 《国际检验医学杂志》 CAS 2024年第9期1068-1072,1079,共6页
目的探讨帕金森病(PD)患者血清脂质运载蛋白2(LCN2)、蛋白S基因(PROS1)水平变化及其与疾病分期、认知障碍的相关性。方法选取2019年1月至2022年12月该院诊治的PD患者120例为研究对象(PD组),参考改良版Hoehn-Yahr分级(H-Y分级),分为早期P... 目的探讨帕金森病(PD)患者血清脂质运载蛋白2(LCN2)、蛋白S基因(PROS1)水平变化及其与疾病分期、认知障碍的相关性。方法选取2019年1月至2022年12月该院诊治的PD患者120例为研究对象(PD组),参考改良版Hoehn-Yahr分级(H-Y分级),分为早期PD组(0~1.5级,n=50),中期PD组(>1.5~3.0级,n=39),晚期PD组(>3.0~5.0级,n=31)。以同期健康体检的60例体检健康者为对照组。检测两组血清LCN2、PROS1水平。比较不同PD疾病分期PD患者血清LCN2、PROS1水平差异。Spearman秩相关分析血清LCN2、PROS1水平与简易智力状态检查量表(MMSE),蒙特利尔认知评估量表(MoCA)及H-Y分级的相关性。多因素Logistic回归分析影响PD患者认知功能障碍的相关因素。绘制受试者工作特征(ROC)曲线分析血清LCN2、PROS1水平对PD患者认知障碍的评估价值。结果PD组血清LCN2、PROS1水平分别为(97.47±11.28)μg/L、(77.52±8.69)μg/L,明显高于对照组(40.15±6.22)μg/L、(32.49±4.37)μg/L,差异均有统计学意义(t=36.641、37.783,均P<0.05)。晚期PD组血清LCN2、PROS1水平高于早期、中期PD组,差异均有统计学意义(均P<0.05)。认知障碍组PD患者病程、血清LCN2、PROS1、H-Y分级均高于认知正常组患者,而MoCA评分、MMSE评分低于认知正常组,差异均有统计学意义(P<0.05)。血清LCN2、PROS1水平与MoCA评分,MMSE评分呈负相关(r=-0.634、-0.489,均P<0.05),与H-Y分级呈正相关(r=0.467、0.625,均P<0.05)。血清LCN2、PROS1是影响PD患者认知功能障碍的相关危险因素。血清LCN2、PROS1单独及联合对PD患者认知功能障碍预测的曲线下面积(AUC)为0.905(95%CI:0.868~0.955),0.803(95%CI:0.764~0.849),0.836(95%CI:0.770~0.867),血清LCN2、PROS1联合检测AUC明显高于单独检测,差异具有统计学意义(Z=5.558,4.974,均P<0.001)。结论PD患者血清LCN2、PROS1水平升高,与PD疾病分期、认知障碍有关,两者联合检测对PD患者认知障碍具有较高的评估价值。 展开更多
关键词 帕金森病 脂质运载蛋白2 蛋白s基因 疾病分期 认知功能障碍
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GST(phi) gene from Macrophyte Lemna minor is involved in cadmium exposure responses
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作者 陈世华 陈新 +3 位作者 窦伟红 王亮 尹海波 郭善利 《Chinese Journal of Oceanology and Limnology》 SCIE CAS CSCD 2016年第2期342-353,共12页
Reactive oxygen species (ROS) scavengers, including ascorbate peroxidase, superoxide dismutase, catalase and peroxidase, are the most commonly used biomarkers in assessing an organisms' response to many biotic and ... Reactive oxygen species (ROS) scavengers, including ascorbate peroxidase, superoxide dismutase, catalase and peroxidase, are the most commonly used biomarkers in assessing an organisms' response to many biotic and abiotic stresses. In this study, we cloned an 866 bp GST(phi) gene in Lemna minor and investigated its characteristics, expression and enzymatic activities under 75 lamol/L cadmium concentrations in comparison with other ROS scavengers. GST(phi) gene expression patterns were similar to those of other scavengers of ROS. This suggests that GST(phi) might be involved in responding to heavy metal (cadmium) stress and that its expression level could be used as a bio-indicator in monitoring cadmium pollution. 展开更多
关键词 Lemna minor GsT(phi) gene heavy metal gene expression BIO-INDICATOR
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