期刊文献+
共找到2篇文章
< 1 >
每页显示 20 50 100
基于并行的同源RNA序列快速搜索算法 被引量:1
1
作者 严繁妹 骆志刚 +2 位作者 管乃洋 丁凡 王金华 《微电子学与计算机》 CSCD 北大核心 2006年第9期1-3,9,共4页
cmsearch程序是目前最流行的同源RNA搜索工具之一,其最大的缺陷在于搜索速度过慢,严重影响了其应用范围。文章基于序列划分策略采用两级工作池方式实现同源RNA的并行搜索,并对其中所涉及的通信和负载平衡问题进行了优化。测试结果表明,... cmsearch程序是目前最流行的同源RNA搜索工具之一,其最大的缺陷在于搜索速度过慢,严重影响了其应用范围。文章基于序列划分策略采用两级工作池方式实现同源RNA的并行搜索,并对其中所涉及的通信和负载平衡问题进行了优化。测试结果表明,此文方法具有良好的可扩展性,在120个处理器时,并行效率可达86.3%,能够用于全基因组范围内的大规模同源RNA序列搜索。 展开更多
关键词 同源rna序列 两级工作池 并行化
下载PDF
CLONING AND COMPARISON OF THE GENES ENCODING PREPROAPAMIN FROM THE VENOM OF 2 HONEYBEE AND 4 WASP SPECIES 被引量:3
2
作者 张素方 施婉君 +1 位作者 程家安 张传溪 《Entomologia Sinica》 CSCD 2003年第1期21-26,共6页
Preproapamin genes were amplified by RT-PCR from total RNA from the venom glands of 2 honeybee species, Apis mellifera, A. cerana cerana, and 4 wasp species, Vespa magnifica, V. velutina nigrothorax and Polistes hebra... Preproapamin genes were amplified by RT-PCR from total RNA from the venom glands of 2 honeybee species, Apis mellifera, A. cerana cerana, and 4 wasp species, Vespa magnifica, V. velutina nigrothorax and Polistes hebraeus, respectively. Their PCR products were ligated into pGEM -T easy vector and the nucleotide sequences analyzed. The six fragments were all 141?bp in length and contained a n ORF coding the precursor of apamin. The apamin precursors of V. magnifica, V. velutina nigrothorax and P. hebraeus had 95% and 93% similarity with that of A. melliera in nucleotide and amino acid sequences, respectively. That of Vespu la maculifrons was identical to that of A. mellifera in nucleotide and amino acid sequences. Apamin precursors of V. magnifica, P. hebraeus and V. velutina nigrothorax also had the same nucleotide sequences. The nucleotide sequences o f preproapamin genes from the Chinese honeybee, A. cerana cerana and 4 wasp sp ecies are described for the first time. A notable discovery was that the wasps species had exactly same apamins as the honeybees despite the fact they belong to different insect families. 展开更多
关键词 VENOM preproapamin APAMIN sequence comparison HONEYBEE WASP
原文传递
上一页 1 下一页 到第
使用帮助 返回顶部