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基于弹性网络模型的蛋白质结构-功能关系
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作者 丁喜峰 米春霖 +2 位作者 陈慰祖 苏计国 王存新 《北京工业大学学报》 CAS CSCD 北大核心 2017年第12期1787-1793,共7页
蛋白质结构-功能关系研究是结构生物学领域的热点问题之一,具有重要的理论和实际应用价值.弹性网络模型(elastic network model,ENM)是获取蛋白质结构本身固有动力学性质,进而揭示其生物学功能的有效方法,在蛋白质结构-功能关系研究中... 蛋白质结构-功能关系研究是结构生物学领域的热点问题之一,具有重要的理论和实际应用价值.弹性网络模型(elastic network model,ENM)是获取蛋白质结构本身固有动力学性质,进而揭示其生物学功能的有效方法,在蛋白质结构-功能关系研究中得到了广泛应用.简要介绍了ENM的基本原理及其在蛋白质结构-功能关系中的应用,主要包括蛋白质功能性运动分析和关键位点识别等. 展开更多
关键词 蛋白质结构-功能关系 弹性网络 正则模分析 功能性运动 关键位点
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18—冠醚—6及其Na^+和K^+络合物振动光谱的研究
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作者 杨捷 吴德印 +3 位作者 唐作华 李泽荣 田安民 鄢国森 《四川大学学报(自然科学版)》 CAS CSCD 1996年第6期723-727,共5页
通过对18-冠醚-6的3种构象及其碱金属络合物的正则模计算,考察了构象与振动光谱分布间的关系,并把计算结果与实验进行了比较,结果表明。
关键词 冠醚 构象 正则模分析 碱金属 络合物 振动光谱
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Product Vibrational State Distributions of F+CH_(3)OH Reaction on Full-Dimensional Accurate Potential Energy Surface
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作者 Meng Zhang Yongfa Zhu Jun Li 《Chinese Journal of Chemical Physics》 SCIE EI CAS CSCD 2022年第1期153-166,I0064,共15页
The hydrogen abstraction reaction of methanol with fluorine atoms can produce HF and CH_(3)O or CH_(2)OH radicals,which are important in the environment,combustion,radiation,and interstellar chemistry.In this work,the... The hydrogen abstraction reaction of methanol with fluorine atoms can produce HF and CH_(3)O or CH_(2)OH radicals,which are important in the environment,combustion,radiation,and interstellar chemistry.In this work,the dynamics of this typical reaction is investigated by the quasi-classical trajectory method based on a recently developed globally accurate full-dimensional potential energy surface.Particularly,the vibrational state distributions of the polyatomic products CH_(3)O and CH_(2)OH are determined by using the normal mode analysis method.It is found that CH_(3)O and CH_(2)OH are dominantly populated in the ground state when the reactants are at the ground ro-vibrational state.The OH stretching mode,torsional mode,H_(2)CO out-of-plane bending mode and their combination bands in the CH_(2)OH product can be effectively excited once the OH stretching mode of the reactant CH_(3)OH is excited to the first vibrationally excited state.Most of the available energy flows into the HF vibrational energy and the translational energy in both channels,while the radical products,CH_(3)O or CH_(2)OH,receive a small amount of energy,consistent with experiment,which is an indication of its spectator nature. 展开更多
关键词 Normal mode analysis Potential energy surface CH_(3)OH Product energy partitioning Hydrogen abstraction reaction
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Environmental regulation and trade pattern:a case of China
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作者 Qi Jianhong Zheng Yingmei Zhao Yong 《Ecological Economy》 2007年第3期234-242,共9页
As a growing number of countries, including both developed and developing countries, have in recent yearstaken environmental regulation at different levels, a question of great concern has been raised: can the regulat... As a growing number of countries, including both developed and developing countries, have in recent yearstaken environmental regulation at different levels, a question of great concern has been raised: can the regulation alterthe existing trade volume and trade pattern, and ultimately drive pollution-intensive industries to countries with low-levelregulations or even those without regulations at all? Starting from the three different propositions concerning therelationship between environmental regulation and trade pattern, this paper applies cointegration analysis and errorcorrection model to empirically testing the relationship between environmental regulation and trade in China during theperiod of 1985-2005. Our empirical results indicate that in the short run the collection of pollution discharge fees bearsa positive impact on the export share of clean products of total exports. Thus, higher pollution discharge fees raise theratio of clean products exports to total exports. This further indicates that more stringent environmental regulationpromotes the exports of clean products. In the long run pollution discharge fees are positively correlated with the exportshare of clean products but negatively associated with their import share. Such correlations imply that environmentalregulation tends to facilitate the international specialization in line with comparative advantages. 展开更多
关键词 Environmental regulation Trade pattern Cointegration analysis Error correction model
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杀蚊苏云金芽胞杆菌毒素Cry4Ba柔韧性分析
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作者 赵新民 叶湘漓 +2 位作者 龙立平 刘石泉 邓中日 《基因组学与应用生物学》 CAS CSCD 北大核心 2016年第12期3430-3436,共7页
采用整合正则模式分析(NMA)的Flexserv程序、WEBnm@程序和TTM@程序分析了杀蚊苏云金芽孢杆菌毒素Cry4Ba的柔韧性。对模拟结果进行了主成分、B-因子、低频振动下的归一化原子平方位移和氨基酸残基运动相关性计算,并对Cry4Ba结构域Ⅰ的α... 采用整合正则模式分析(NMA)的Flexserv程序、WEBnm@程序和TTM@程序分析了杀蚊苏云金芽孢杆菌毒素Cry4Ba的柔韧性。对模拟结果进行了主成分、B-因子、低频振动下的归一化原子平方位移和氨基酸残基运动相关性计算,并对Cry4Ba结构域Ⅰ的α4和α5螺旋在细胞膜中的运动进行了模拟。结果表明,Cry4结构域Ⅰ和结构域Ⅱ表现较大柔韧性,其中N端结构域Ⅰ的螺旋α3、α4和α5柔性表现较大。α4和α5螺旋在细胞膜中的旋转运动、平动、滑动和倾斜运动具有相似的幅度和方向,α4和α5的运动具有较好的协同性。结构域Ⅱ的顶端3个突环都表现较大的柔韧性。各个结构域内部的氨基酸残基运动具有一定的相关性,而各结构域之间运动的相关性较小。研究结果支持Cry4Ba结构域Ⅰ在细胞膜上形成孔道的伞状模型机制并显示结构域Ⅱ顶端突环重要性。 展开更多
关键词 蚊虫 苏云金芽胞杆菌 Cry4Ba 正则模分析 柔韧性
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