There is another way for new species to invade former settlers＇ habitats and successfully settle there; it is demonstrated that the su- per-population, which plays a key role in changing the world-wide environment, c...There is another way for new species to invade former settlers＇ habitats and successfully settle there; it is demonstrated that the su- per-population, which plays a key role in changing the world-wide environment, can create many new microhabitats in the old habitat, it is these new microhabitats that make new species easily come into the old habitat and settle there without fierce competition with former settlers. In other words, the super-population lead to the differentiation of the worldwide environment, lead to the environmental diversity in the biosphere. Through the differentiation of the environment the super-population produces many new microhabitats for new species, the appearance of many new microhabitats make it possible for new species to coexist with former settlers in the biosphere. The cqexistence of new species with former settlers or with new species＇ ＂ancestors＂ results in the increaseing in the biodiversity of the biosphere. The super-population is the founder of many new environments on the earth, it bridges the habitat diversity and the biodiversity. Now It is easy to explain the phenomenon that new species sometimes coexist with former settlers and even depend on former settlers in the biosphere rather than fierce competition between them.展开更多
In order to understand the large-scale spatial distribution characteristics of picoplankton,nanophytoplankton and virio-plankton and their relationship with environmental variables in coastal and offshore waters,flow ...In order to understand the large-scale spatial distribution characteristics of picoplankton,nanophytoplankton and virio-plankton and their relationship with environmental variables in coastal and offshore waters,flow cytometry(FCM) was used to ana-lyze microbial abundance of samples collected in summer from four depths at 36 stations in the North Yellow Sea(NYS).The data revealed spatial heterogeneity in microbial populations in the offshore and near-shore waters of the NYS during the summer.For the surface layer,picoeukaryotes were abundant in the near-shore waters,Synechococcus was abundant in the offshore areas,and bacte-rial and viral abundances were high in the near-shore waters around the Liaodong peninsula.In the near-shore waters,no significant vertical variation of picophytoplankton(0.2-2μm) abundance was found.However,the nanophytoplankton abundance was higher in the upper layers(from the surface to 10 m depth) than in the bottom layer.For the offshore waters,both pico-and nanophytoplankton(2-20μm) abundance decreased sharply with depth in the North Yellow Sea Cold Water Mass(NYSCWM).But,for the vertical dis-tribution of virus and bacteria abundance,no significant variation was observed in both near-shore and offshore waters.Autotrophic microbes were more sensitive to environmental change than heterotrophic microbes and viruses.Viruses showed a positive correla-tion with bacterial abundance,suggesting that the bacteriophage might be prominent for virioplankton(about 0.45μm) in summer in the NYS and that viral abundance might play an important role in microbial loop functions.展开更多
The effects of slope aspects on soil biogeochemical properties and plant communities in forested environments have been studied extensively; however, slope aspect influence on soil microbial communities remains largel...The effects of slope aspects on soil biogeochemical properties and plant communities in forested environments have been studied extensively; however, slope aspect influence on soil microbial communities remains largely unexamined, despite the central role of soil biota in ecosystem functioning. In this study, the communities of both soil bacteria and arbuscular mycorrhizal fungi （AMF） were investigated using tagged pyrosequencing for three types of slope aspects （south-facing aspect, north-facing aspect and flat area） in a boreal forest of the Greater Khingan Mountains, China. The bacterial and AMF community composition differed with slope aspects. Bacterial diversity was the lowest on the north-facing aspect, and AMF diversity was the lowest on the flat area. Aspects also had a significant impact on soil pH and available phosphorus （P） and shrubby biomass. Soil pH and understory shrub biomass were significantly correlated with bacterial communities, and soil available P and shrub biomass showed significant correlations with AMF communities. Our results suggested that slope aspects affected bacterial and AMF communities, mediated by aspect-induced changes in plant community and soil chemical properties （e.g., pH and available P）, which improved the knowledge on the effects of forest slope aspects on aboveground and belowground communities.展开更多
Using high-throughput sequencing on metagenome to analyze marine microbial community, it is one of current main issues in the field of environmental microbe research. In this paper, we conducted the functional analysi...Using high-throughput sequencing on metagenome to analyze marine microbial community, it is one of current main issues in the field of environmental microbe research. In this paper, we conducted the functional analysis on seven samples of metagenomic data from different depth seawater in Hawaii. The results of gene prediction and function annotation indicate that there are large amounts of potential novel genes of which functions remain unknown at present. Based on the gene annotation, codon usage bias is studied on ribosomal protein-related genes and shows an evident influence by the marine extreme environment. Furthermore, focusing on the marine environmental differences such as light intensity, dissolved oxygen, temperature and pressure among various depths, comparative analysis is carried out on related genes and metabolic pathways. Thus, the understanding as well as new insights into the correlation between marine environment and microbes are proposed at molecular level. Therefore, the studies herein afford a clue to reveal the special living strategies of microbial community from sea surface to deep sea.展开更多
基金Supported by Science Foundation of Chuxiong Normal University(06YJRC19)National Natural Science Foundation of China(30760040)Key Subject Construction of Chuxiong Normal University(05YJJSXK03)~~
文摘There is another way for new species to invade former settlers＇ habitats and successfully settle there; it is demonstrated that the su- per-population, which plays a key role in changing the world-wide environment, can create many new microhabitats in the old habitat, it is these new microhabitats that make new species easily come into the old habitat and settle there without fierce competition with former settlers. In other words, the super-population lead to the differentiation of the worldwide environment, lead to the environmental diversity in the biosphere. Through the differentiation of the environment the super-population produces many new microhabitats for new species, the appearance of many new microhabitats make it possible for new species to coexist with former settlers in the biosphere. The cqexistence of new species with former settlers or with new species＇ ＂ancestors＂ results in the increaseing in the biodiversity of the biosphere. The super-population is the founder of many new environments on the earth, it bridges the habitat diversity and the biodiversity. Now It is easy to explain the phenomenon that new species sometimes coexist with former settlers and even depend on former settlers in the biosphere rather than fierce competition between them.
基金supported by the General Oceano-graphic Survey Project(908 Project)the Special Fund forPublic Welfare Industry(Oceanography)(Grant No.20080511)the CAS Hundred Talents Project‘The response mechanism of the typical gulf ecosystem to the environmental changes’
文摘In order to understand the large-scale spatial distribution characteristics of picoplankton,nanophytoplankton and virio-plankton and their relationship with environmental variables in coastal and offshore waters,flow cytometry(FCM) was used to ana-lyze microbial abundance of samples collected in summer from four depths at 36 stations in the North Yellow Sea(NYS).The data revealed spatial heterogeneity in microbial populations in the offshore and near-shore waters of the NYS during the summer.For the surface layer,picoeukaryotes were abundant in the near-shore waters,Synechococcus was abundant in the offshore areas,and bacte-rial and viral abundances were high in the near-shore waters around the Liaodong peninsula.In the near-shore waters,no significant vertical variation of picophytoplankton(0.2-2μm) abundance was found.However,the nanophytoplankton abundance was higher in the upper layers(from the surface to 10 m depth) than in the bottom layer.For the offshore waters,both pico-and nanophytoplankton(2-20μm) abundance decreased sharply with depth in the North Yellow Sea Cold Water Mass(NYSCWM).But,for the vertical dis-tribution of virus and bacteria abundance,no significant variation was observed in both near-shore and offshore waters.Autotrophic microbes were more sensitive to environmental change than heterotrophic microbes and viruses.Viruses showed a positive correla-tion with bacterial abundance,suggesting that the bacteriophage might be prominent for virioplankton(about 0.45μm) in summer in the NYS and that viral abundance might play an important role in microbial loop functions.
基金We thank Ms. LIU Weili, Dr. CAI Wenhua, Mr. LIU Bo, and Dr. FANG Lei from the Institute of Ap- plied Ecology, Chinese Academy of Sciences for assis- tance in sampling and Dr. XIONG Jingbo from the Ningbo University of China for assistance in bioinfor- matic analysis. This research was supported by the Strategic Priority Research Program of Chinese Aca- demy of Sciences （No. XDB15010101）, the National Basic Research Program （973 Program） of China （No. 2014CB954002）, and the National Natural Science Foundation of China （No. 41371254）.
文摘The effects of slope aspects on soil biogeochemical properties and plant communities in forested environments have been studied extensively; however, slope aspect influence on soil microbial communities remains largely unexamined, despite the central role of soil biota in ecosystem functioning. In this study, the communities of both soil bacteria and arbuscular mycorrhizal fungi （AMF） were investigated using tagged pyrosequencing for three types of slope aspects （south-facing aspect, north-facing aspect and flat area） in a boreal forest of the Greater Khingan Mountains, China. The bacterial and AMF community composition differed with slope aspects. Bacterial diversity was the lowest on the north-facing aspect, and AMF diversity was the lowest on the flat area. Aspects also had a significant impact on soil pH and available phosphorus （P） and shrubby biomass. Soil pH and understory shrub biomass were significantly correlated with bacterial communities, and soil available P and shrub biomass showed significant correlations with AMF communities. Our results suggested that slope aspects affected bacterial and AMF communities, mediated by aspect-induced changes in plant community and soil chemical properties （e.g., pH and available P）, which improved the knowledge on the effects of forest slope aspects on aboveground and belowground communities.
基金supported by the National ‘‘Twelfth Five-Year’’ Plan for Science and Technology of China(2012BAI06B02)the National Natural Science Foundation of China(91231119, 30970667 and 11021463)the National Basic Research Program of China (2011CB707500)
文摘Using high-throughput sequencing on metagenome to analyze marine microbial community, it is one of current main issues in the field of environmental microbe research. In this paper, we conducted the functional analysis on seven samples of metagenomic data from different depth seawater in Hawaii. The results of gene prediction and function annotation indicate that there are large amounts of potential novel genes of which functions remain unknown at present. Based on the gene annotation, codon usage bias is studied on ribosomal protein-related genes and shows an evident influence by the marine extreme environment. Furthermore, focusing on the marine environmental differences such as light intensity, dissolved oxygen, temperature and pressure among various depths, comparative analysis is carried out on related genes and metabolic pathways. Thus, the understanding as well as new insights into the correlation between marine environment and microbes are proposed at molecular level. Therefore, the studies herein afford a clue to reveal the special living strategies of microbial community from sea surface to deep sea.
