Medusae in 116 samples collected from the coastal waters of the northern Beibu Gulf during four seasonal oceanographic cruises from October 2017 to August 2018 were analyzed.In total,34 species were identified.Two of ...Medusae in 116 samples collected from the coastal waters of the northern Beibu Gulf during four seasonal oceanographic cruises from October 2017 to August 2018 were analyzed.In total,34 species were identified.Two of the species are new to science,Proboscidactyla pentacanalis Xu,Chen&Yang sp.nov.and Helgicirrha apapillata Xu,Chen&Wang sp.nov.,and three species are newly recorded in the Beibu Gulf,i.e.,Hydractinia vacuolata Xu&Huang,2006,Proboscidactyla flavicirrata Brandnt,1834 and Phialella macrogona Xu,Huang&Wang,1985.Collections of the species were deposited at the Third Institute of Oceanography,Ministry of Natural Resources.展开更多
Proteoglycans and collagen molecules are interacting with each other thereby forming various connective tissues. The sulfation pattern of proteoglycans differs depending on the kind of tissue and/or the degree of matu...Proteoglycans and collagen molecules are interacting with each other thereby forming various connective tissues. The sulfation pattern of proteoglycans differs depending on the kind of tissue and/or the degree of maturation. Tissues from Cnidaria are suitable examples for exploration of the effects in relation to the presence and the absence of sulfate groups, when studying characteristic fragments of the long proteoglycan carbohydrate chains in silico. It has been described that a non-sulfated chondroitin appears as a scaffold in early morphogenesis of all nematocyst types in Hydra. On the other hand, sulfated glucosaminoglycans play an important role in various developmental processes of Cnidaria. In order to understand this biological phenomenon on a sub-molecular level we have analysed the structures of sulfated and non-sulfated proteoglycan carbohydrate chains as well as the structure of diverse collagen molecules with computational methods including quantum chemical calculations. The strong interactions between the sulfate groups of the carbohydrates moieties in proteoglycans and positively charged regions of collagen are essential in stabilizing various Cnidaria tissues but could hinder the nematocyst formation and its proper function. The results of our quantum chemical calculations show that the sulfation pattern has a significant effect on the conformation of chondroitin structures under study.展开更多
Five species, Lipopora lissa Jell and Jell, 1976, Lipopora daseia Jell and Jell, 1976, Tretocylichne perplexa Engelbretsen, 1993 from Australia, Cambroctoconus orientalis Park, Woo, Lee, Lee, Lee, Han and Chough, 2011...Five species, Lipopora lissa Jell and Jell, 1976, Lipopora daseia Jell and Jell, 1976, Tretocylichne perplexa Engelbretsen, 1993 from Australia, Cambroctoconus orientalis Park, Woo, Lee, Lee, Lee, Han and Chough, 2011 from China, and Cambroctoconus kyrgyzstanicus Peel, 2014 from Kyrgyzstan, belonging to the Cambrian stem-group cnidarians have been documented in the fossil record. Cambroctoconus coreaensis sp. nov., interpreted here as a stem-group cnidarian, from the Seokgaejae section in the Daegi Formation, Taebaek Group(Cambrian Series 3), Taebaeksan Basin, central-eastern Korean Peninsula, has a slender cup-shaped skeleton. A cladistic analysis produced 21 most parsimonious trees, which invariably placed the six stem-group cnidarians below the crown-group, but their relationships within the stem-group are unresolved. Nine out of the 21 trees suggest a monophyletic relationship for the Cambrian stem-group cnidarians, whereas in six other trees a monophyly of Cambroctoconus and Tretocylichne appeared as the sister-group to the crown-group cnidarians with Lipopora at the most basal branch. This result may reflect the fact that crown-group cnidarians evolved in the Precambrian, and suggests that the diversity of stem-group cnidarians was a result of an independent radiation in the Cambrian.展开更多
Mucin genes are the main component of mucus. The sea anemone species, Aulactinia veratra (Phylum Cnidaria) contains different types of mucin genes. In the intertidal zone, A. veratra is found to be exposed to air duri...Mucin genes are the main component of mucus. The sea anemone species, Aulactinia veratra (Phylum Cnidaria) contains different types of mucin genes. In the intertidal zone, A. veratra is found to be exposed to air during the low tide and produces large quantities of mucus as an external covering. The relation between low tide and mucus secretion is still unclear, and what is the role of mucin during arial exposure is not yet investigated. This study hypothesised that the mucin genes in A. veratra would have significantly high expression in response to aerial exposure. Therefore, the aim of current study was to examine and analyses the response of A. veratra mucins in response to an experiment involving three hours of aerial exposure. To achieve this, aim the RNA-sequencing and bioinformatics analyses were used to examine the expression profile of A. veratra mucin genes in response to aerial exposure. The generated results have shown that, Mucin4-like and mucin5B-like were up-regulated in response to the three hours of aerial exposure in A. veratra. This finding shows a significant role of mucin5B-like and mucin4-like genes in response to air stress at low tide. The data generated from this study could be used in conjunction with future mucin gene studies of sea anemones and other cnidarians to compare A. veratra mucin gene expression results across time, and to extend our understanding of mucin stress response in this phylum.展开更多
A new species of bubblegum coral,Paragorgia papillata sp.nov.,discovered from a seamount located on the Caroline Ridge at the water depth of 858 m,is studied using morphological and molecular approaches.The new gorgon...A new species of bubblegum coral,Paragorgia papillata sp.nov.,discovered from a seamount located on the Caroline Ridge at the water depth of 858 m,is studied using morphological and molecular approaches.The new gorgonian is white-colored,uniplanar with prominent autozooids,and measures about670-mm high and 690-mm wide.The genetic distance and phylogenetic analysis showed that P.papillata sp.nov.was closely related to P.coralloides Bayer,1993,but the former differs morphologically from the latter by its prominent calyces(diameter 2.0-4.0 mm and height 1.5-3.0 mm vs.both diameter and height about 1 mm),white cortex(vs.pink),regular 8-radiates in surface cortex(vs.mostly 8-radiate derived globular radiates)and highly ornate medullar spindles(length 185-400μm vs.no more than 150μm).P.papillata sp.nov.is the third known white-colored species of the genus,and the fifth species found in the tropical Western Pacific.展开更多
Quadrapyrgites is a microfossil reported with embryonic and post-embryonic stages from the lower Cambrian small shelly fauna of South China,and is closely related to Olivooides.Their development mode and systematic po...Quadrapyrgites is a microfossil reported with embryonic and post-embryonic stages from the lower Cambrian small shelly fauna of South China,and is closely related to Olivooides.Their development mode and systematic positions are hot topics in palaeoembryology and evolutionary biology in recent years,but are still under debate.Here,we present a description on the growth pattern and post-embryonic development of Quadrapyrgites quadratacris recovered from the lower Cambrian of South China.The growth zone of Q.quadratacris is situated at the oral end,and new terminal lobes are generated within the oral aperture.The terminal lobes are first in control of the opening and closure of the tubes,and later transferred to be crests,thus elongating the tubes.The post-embryonic development is characterized by a one-by-one addition of crests on the post-embryonic tissue,and an ontogenetic sequence with crest number from 1 to 17 is reconstructed.During the ontogeny,the embryonic tissue remains stable in size and morphology.The oral aperture is the only opening of the tubes,while a possible anus on the apical end does not occur.Quadrapyrgites was proposed to be the sister group of Olivooides,and now this is strengthened by the identical growth pattern and post-embryonic development.The comprehensive data from anatomy,growth pattern and post-embryonic development reject the stemlineage cycloneuralian affinity for Quadrapyrgites and Olivooides,and instead support a coronate scyphozoan hypothesis.展开更多
基金The National Natural Science Foundation of China under contract No.41406216the foundation of Third Institute of Oceanography under contract No.2013016the Global Climate Change and Ocean Atmosphere Interaction Research,Biological Classification System Research and the Marine Biological Sample Museum Upgrade and Expansion under contract No.GASI-01-02-04
文摘Medusae in 116 samples collected from the coastal waters of the northern Beibu Gulf during four seasonal oceanographic cruises from October 2017 to August 2018 were analyzed.In total,34 species were identified.Two of the species are new to science,Proboscidactyla pentacanalis Xu,Chen&Yang sp.nov.and Helgicirrha apapillata Xu,Chen&Wang sp.nov.,and three species are newly recorded in the Beibu Gulf,i.e.,Hydractinia vacuolata Xu&Huang,2006,Proboscidactyla flavicirrata Brandnt,1834 and Phialella macrogona Xu,Huang&Wang,1985.Collections of the species were deposited at the Third Institute of Oceanography,Ministry of Natural Resources.
基金Elements of the project are financed by the European Commission’s Framework Program 7(BIO-NMR-00007)-Bio-NMR grant:Jellyfish protein NMR(BIO-NMR-00007)-IEP.
文摘Proteoglycans and collagen molecules are interacting with each other thereby forming various connective tissues. The sulfation pattern of proteoglycans differs depending on the kind of tissue and/or the degree of maturation. Tissues from Cnidaria are suitable examples for exploration of the effects in relation to the presence and the absence of sulfate groups, when studying characteristic fragments of the long proteoglycan carbohydrate chains in silico. It has been described that a non-sulfated chondroitin appears as a scaffold in early morphogenesis of all nematocyst types in Hydra. On the other hand, sulfated glucosaminoglycans play an important role in various developmental processes of Cnidaria. In order to understand this biological phenomenon on a sub-molecular level we have analysed the structures of sulfated and non-sulfated proteoglycan carbohydrate chains as well as the structure of diverse collagen molecules with computational methods including quantum chemical calculations. The strong interactions between the sulfate groups of the carbohydrates moieties in proteoglycans and positively charged regions of collagen are essential in stabilizing various Cnidaria tissues but could hinder the nematocyst formation and its proper function. The results of our quantum chemical calculations show that the sulfation pattern has a significant effect on the conformation of chondroitin structures under study.
基金supported by the Basic Science Research Program through the National Research Foundation of Korea (NRF) funded by the Ministry of Education (#PN15090, KOPRI)supported by a grant from the National Research Foundation of Korea (NRF 2012-005612)IGCP Project 591: The Early to Middle Paleozoic Revolution
文摘Five species, Lipopora lissa Jell and Jell, 1976, Lipopora daseia Jell and Jell, 1976, Tretocylichne perplexa Engelbretsen, 1993 from Australia, Cambroctoconus orientalis Park, Woo, Lee, Lee, Lee, Han and Chough, 2011 from China, and Cambroctoconus kyrgyzstanicus Peel, 2014 from Kyrgyzstan, belonging to the Cambrian stem-group cnidarians have been documented in the fossil record. Cambroctoconus coreaensis sp. nov., interpreted here as a stem-group cnidarian, from the Seokgaejae section in the Daegi Formation, Taebaek Group(Cambrian Series 3), Taebaeksan Basin, central-eastern Korean Peninsula, has a slender cup-shaped skeleton. A cladistic analysis produced 21 most parsimonious trees, which invariably placed the six stem-group cnidarians below the crown-group, but their relationships within the stem-group are unresolved. Nine out of the 21 trees suggest a monophyletic relationship for the Cambrian stem-group cnidarians, whereas in six other trees a monophyly of Cambroctoconus and Tretocylichne appeared as the sister-group to the crown-group cnidarians with Lipopora at the most basal branch. This result may reflect the fact that crown-group cnidarians evolved in the Precambrian, and suggests that the diversity of stem-group cnidarians was a result of an independent radiation in the Cambrian.
文摘Mucin genes are the main component of mucus. The sea anemone species, Aulactinia veratra (Phylum Cnidaria) contains different types of mucin genes. In the intertidal zone, A. veratra is found to be exposed to air during the low tide and produces large quantities of mucus as an external covering. The relation between low tide and mucus secretion is still unclear, and what is the role of mucin during arial exposure is not yet investigated. This study hypothesised that the mucin genes in A. veratra would have significantly high expression in response to aerial exposure. Therefore, the aim of current study was to examine and analyses the response of A. veratra mucins in response to an experiment involving three hours of aerial exposure. To achieve this, aim the RNA-sequencing and bioinformatics analyses were used to examine the expression profile of A. veratra mucin genes in response to aerial exposure. The generated results have shown that, Mucin4-like and mucin5B-like were up-regulated in response to the three hours of aerial exposure in A. veratra. This finding shows a significant role of mucin5B-like and mucin4-like genes in response to air stress at low tide. The data generated from this study could be used in conjunction with future mucin gene studies of sea anemones and other cnidarians to compare A. veratra mucin gene expression results across time, and to extend our understanding of mucin stress response in this phylum.
基金This research was funded by a grant from collaboration program( No.NRIFS 8171-46-1) and Japan Society for the Promotion of Science(JSPS)(No.S-05251) .
基金the Science&Technology Basic Resources Investigation Program of China(No.2017FY100804)the National Natural Science Foundation of China(Nos.41930533,31970489)+1 种基金the Strategic Priority Research Program of the Chinese Academy of Sciences(No.XDB42000000)the Senior User Project of R/V Kexue(Nos.KEXUE2019GZ04,KEXUE2020G01)。
文摘A new species of bubblegum coral,Paragorgia papillata sp.nov.,discovered from a seamount located on the Caroline Ridge at the water depth of 858 m,is studied using morphological and molecular approaches.The new gorgonian is white-colored,uniplanar with prominent autozooids,and measures about670-mm high and 690-mm wide.The genetic distance and phylogenetic analysis showed that P.papillata sp.nov.was closely related to P.coralloides Bayer,1993,but the former differs morphologically from the latter by its prominent calyces(diameter 2.0-4.0 mm and height 1.5-3.0 mm vs.both diameter and height about 1 mm),white cortex(vs.pink),regular 8-radiates in surface cortex(vs.mostly 8-radiate derived globular radiates)and highly ornate medullar spindles(length 185-400μm vs.no more than 150μm).P.papillata sp.nov.is the third known white-colored species of the genus,and the fifth species found in the tropical Western Pacific.
基金supported by the National Basic Research Program of China (973 Project,2011CB403604)the Chinese Ministry of Agriculture under the Investigation of Fishery Stocks in China Seas Programthe State Oceanic Administration of China under the Integrated Survey and Assessment of Coastal China Seas
文摘材料系于2007年(1,4,7,10月)、2008年(1,7月)和2009年(1月)在北部湾水域采集的,调查海区共设52站,共采集364份样品。经分析鉴定出67种水母,其中有3新种和中国2新纪录,主辐特古水母Tregouboiva perradialis Xu,Huang et Du,sp. nov.,泡真囊水母Euphysora vacuola Xu,Huang et Guo,sp. nov.,波腺侧丝水母Helgicirrha sinuatus Xu,Huang et Du,sp. nov.,艾格帝纹水母Timoides agassizi Bigelow,1904和大腺美螅水母Clytia macrogonia Bouillon,1984。此外,还报道了20种水母为北部湾新纪录。模式标本保存在中国水产科学研究院南海水产研究所。主辐特古水母,新种Tregoubovia perradialis Xu,Huang et Du,sp. nov.鉴别特征伞近钟形,外伞有16条双层向心肋; 垂管很大,近方形,约为内伞腔深度4/5;口有4个延长成触手状的口唇,具环状刺胞,无末端刺胞球;隔膜短;4个大的椭圆形生殖腺,几乎覆盖整个垂管主辐位;伞缘无缘触手或缘基球;无眼点。正模(BG 001),北部湾S30站(17°30'N,107°30'E;水深70m),2008-07-06,梁新采(南海水产研究所)。词源:新种种名源自拉丁词perradialis,意为生殖腺位于垂管主辐位。泡真囊水母,新种Euphysora vacuola Xu,Huang et Guo,sp. nov.鉴别特征伞有钝圆形顶突;垂管长椭圆形,约有1/2长度超出缘膜口外,垂管基部很宽,覆盖着浓密泡状细胞组织;4条辐管上部与扩大的垂管基部连接;生殖腺围绕着垂管壁;主触手很长,触手基球很大,呈卵圆形至球形,触手上具30～40个成排的背轴刺胞球,无末端膨大刺胞球,另3个触手基球退化,很小,同样大小,无丝状触手,每个基球具外胚层背距。正模(BG 006),北部湾C15站(20°N,109°E;水深44m),2007-07-25,梁新采(南海水产研究所)。副模(TB001),台湾海峡102站(23°40'N,118°44'E;水深54m),1988-06-29,黄加祺采(厦门大学海洋学系)。词源:新种种名源自拉丁词vacuola,意为该种在垂管基部覆盖浓密泡状细胞组织。波腺侧丝水母,新种 Helgicirrha sinuatus Xu,Huang et Du,sp.nov.鉴别特征伞略扁于半球形;胃柄长,约有1/2超出缘膜口外,垂管短小,口有4个短的略为向上弯曲折叠的口唇;生殖腺深波形,位于辐管远端1/3处; 16 ～ 24 条缘触手,每条触手具2对侧丝,每2条触手间有3～5个缘疣,具1对侧丝和3～4个平衡囊,每个平衡囊有2～4个平衡石;所有触手和缘疣基部均有向轴排泄乳突。正模(BG 007),副模(BG 008-009),北部湾S18站( 18°45'N,106°45'E;水深53m),2007-04-15,梁新采(南海水产研究所)。词源:新种种名源自拉丁词sinuatus,意为该种生殖腺深波状。
基金supported by the National Natural Science Foundation of China(41072012 and 41102003)the State Key Laboratory of Palaeobiology and Stratigraphy,Nanjing Institute of Geology and Palaeontology,Chinese Academy of Sciences(113115and 20132107)+1 种基金the Key Project of Central University Fund(CHD2012ZD017)The Ninth‘‘Challenge Cup’’Competition of College Students’Extracurricular Academic and Technological Achievements,Chang’an University,College students’ innovative entrepreneurial training program(201410710144 and 201410710105)
文摘Quadrapyrgites is a microfossil reported with embryonic and post-embryonic stages from the lower Cambrian small shelly fauna of South China,and is closely related to Olivooides.Their development mode and systematic positions are hot topics in palaeoembryology and evolutionary biology in recent years,but are still under debate.Here,we present a description on the growth pattern and post-embryonic development of Quadrapyrgites quadratacris recovered from the lower Cambrian of South China.The growth zone of Q.quadratacris is situated at the oral end,and new terminal lobes are generated within the oral aperture.The terminal lobes are first in control of the opening and closure of the tubes,and later transferred to be crests,thus elongating the tubes.The post-embryonic development is characterized by a one-by-one addition of crests on the post-embryonic tissue,and an ontogenetic sequence with crest number from 1 to 17 is reconstructed.During the ontogeny,the embryonic tissue remains stable in size and morphology.The oral aperture is the only opening of the tubes,while a possible anus on the apical end does not occur.Quadrapyrgites was proposed to be the sister group of Olivooides,and now this is strengthened by the identical growth pattern and post-embryonic development.The comprehensive data from anatomy,growth pattern and post-embryonic development reject the stemlineage cycloneuralian affinity for Quadrapyrgites and Olivooides,and instead support a coronate scyphozoan hypothesis.
