To study the genetic association and epistatic interaction of the interleukin (IL)-10 and IL-10/STAT3 pathways in pediatric inflammatory bowel disease (IBD). METHODSA total of 159 pediatric inflammatory IBD patients (...To study the genetic association and epistatic interaction of the interleukin (IL)-10 and IL-10/STAT3 pathways in pediatric inflammatory bowel disease (IBD). METHODSA total of 159 pediatric inflammatory IBD patients (Crohn’s disease, n = 136; ulcerative colitis, n = 23) and 129 matched controls were studied for genetic association of selected single nucleotide polymorphisms (SNPs) of the IL-10 gene and the genes IL10RA, IL10RB, STAT3, and HO1, from the IL-10/STAT3 signaling pathway. As interactions between SNPs from different loci may significantly affect the associated risk for disease, additive (a) and dominant (d) modeling of SNP interactions was also performed to examine high-order epistasis between combinations of the individual SNPs. RESULTSThe results showed that IL-10 rs304496 was associated with pediatric IBD (P = 0.022), but no association was found for two other IL-10 SNPs, rs1800872 and rs2034498, or for SNPs in genes IL10RA, IL10RB, STAT3, and HO1. However, analysis of epistatic interaction among these genes showed significant interactions: (1) between two IL-10 SNPs rs1800872 and rs3024496 (additive-additive P = 0.00015, Bonferroni P value (Bp) = 0.003); (2) between IL-10RB rs2834167 and HO1 rs2071746 (dominant-additive, P = 0.0018, Bp = 0.039); and (3) among IL-10 rs1800872, IL10RB rs2834167, and HO1 rs2071746 (additive-dominant-additive, P = 0.00015, Bp = 0.005), as well as weak interactions among IL-10 rs1800872, IL-10 rs3024496, and IL-10RA (additive-additive-additive, P = 0.003; Bp = 0.099), and among IL10RA, IL10RB, and HO1 genes (additive-dominant-additive, P = 0.008, Bp = 0.287). CONCLUSIONThese results indicate that both the IL-10 gene itself, and through epistatic interaction with genes within the IL-10/STAT3 signaling pathway, contribute to the risk of pediatric IBD.展开更多
目的观测黏附分子CD49b和负性调节分子淋巴细胞活化基因3(LAG-3)在反复自发性流产(RSA)患者CD14+细胞上的表达。方法收集7例正常对照者和12例RSA患者外周血5 m L,分离外周血单个核细胞(PBMC)和血浆,流式细胞术检测PBMC中CD14+细胞表面CD...目的观测黏附分子CD49b和负性调节分子淋巴细胞活化基因3(LAG-3)在反复自发性流产(RSA)患者CD14+细胞上的表达。方法收集7例正常对照者和12例RSA患者外周血5 m L,分离外周血单个核细胞(PBMC)和血浆,流式细胞术检测PBMC中CD14+细胞表面CD49b和LAG-3的表达;ELISA检测血浆中细胞因子白细胞介素10(IL-10)和转化生长因子β(TGF-β)的水平。结果 RSA患者外周血中,单核细胞的比例与正常对照组相比无显著性差异;CD14+CD49b+、CD14+LAG-3+、CD14+CD49b+LAG-3+细胞的百分比均低于正常对照组。血浆中,TGF-β的水平低于正常对照组;IL-10的水平无显著差异。结论 RSA患者外周血CD14+细胞表面CD49b和LAG-3的表达和血浆中TGF-β的水平均显著降低。展开更多
基金Supported by a Children Miracle Network Research Grant,No.132698 to Lin Z(P.I.)and Thomas NJ(Co-P.I.)(2011-2013)and Floros J(P.I.)(2013-2014)
文摘To study the genetic association and epistatic interaction of the interleukin (IL)-10 and IL-10/STAT3 pathways in pediatric inflammatory bowel disease (IBD). METHODSA total of 159 pediatric inflammatory IBD patients (Crohn’s disease, n = 136; ulcerative colitis, n = 23) and 129 matched controls were studied for genetic association of selected single nucleotide polymorphisms (SNPs) of the IL-10 gene and the genes IL10RA, IL10RB, STAT3, and HO1, from the IL-10/STAT3 signaling pathway. As interactions between SNPs from different loci may significantly affect the associated risk for disease, additive (a) and dominant (d) modeling of SNP interactions was also performed to examine high-order epistasis between combinations of the individual SNPs. RESULTSThe results showed that IL-10 rs304496 was associated with pediatric IBD (P = 0.022), but no association was found for two other IL-10 SNPs, rs1800872 and rs2034498, or for SNPs in genes IL10RA, IL10RB, STAT3, and HO1. However, analysis of epistatic interaction among these genes showed significant interactions: (1) between two IL-10 SNPs rs1800872 and rs3024496 (additive-additive P = 0.00015, Bonferroni P value (Bp) = 0.003); (2) between IL-10RB rs2834167 and HO1 rs2071746 (dominant-additive, P = 0.0018, Bp = 0.039); and (3) among IL-10 rs1800872, IL10RB rs2834167, and HO1 rs2071746 (additive-dominant-additive, P = 0.00015, Bp = 0.005), as well as weak interactions among IL-10 rs1800872, IL-10 rs3024496, and IL-10RA (additive-additive-additive, P = 0.003; Bp = 0.099), and among IL10RA, IL10RB, and HO1 genes (additive-dominant-additive, P = 0.008, Bp = 0.287). CONCLUSIONThese results indicate that both the IL-10 gene itself, and through epistatic interaction with genes within the IL-10/STAT3 signaling pathway, contribute to the risk of pediatric IBD.
文摘目的观测黏附分子CD49b和负性调节分子淋巴细胞活化基因3(LAG-3)在反复自发性流产(RSA)患者CD14+细胞上的表达。方法收集7例正常对照者和12例RSA患者外周血5 m L,分离外周血单个核细胞(PBMC)和血浆,流式细胞术检测PBMC中CD14+细胞表面CD49b和LAG-3的表达;ELISA检测血浆中细胞因子白细胞介素10(IL-10)和转化生长因子β(TGF-β)的水平。结果 RSA患者外周血中,单核细胞的比例与正常对照组相比无显著性差异;CD14+CD49b+、CD14+LAG-3+、CD14+CD49b+LAG-3+细胞的百分比均低于正常对照组。血浆中,TGF-β的水平低于正常对照组;IL-10的水平无显著差异。结论 RSA患者外周血CD14+细胞表面CD49b和LAG-3的表达和血浆中TGF-β的水平均显著降低。
