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Quantitative hepatitis B core antibody and quantitative hepatitis B surface antigen:Novel viral biomarkers for chronic hepatitis B management
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作者 Wattana Leowattana Pathomthep Leowattana Tawithep Leowattana 《World Journal of Hepatology》 2024年第4期550-565,共16页
The management of hepatitis B virus(HBV)infection now involves regular and appropriate monitoring of viral activity,disease progression,and treatment response.Traditional HBV infection biomarkers are limited in their ... The management of hepatitis B virus(HBV)infection now involves regular and appropriate monitoring of viral activity,disease progression,and treatment response.Traditional HBV infection biomarkers are limited in their ability to predict clinical outcomes or therapeutic effectiveness.Quantitation of HBV core antibodies(qAnti-HBc)is a novel non-invasive biomarker that may help with a variety of diagnostic issues.It was shown to correlate strongly with infection stages,hepatic inflammation and fibrosis,chronic infection exacerbations,and the presence of occult infection.Furthermore,qAnti-HBc levels were shown to be predictive of spontaneous or treatment-induced HBeAg and HBsAg seroclearance,relapse after medication termination,re-infection following liver transplantation,and viral reactivation in the presence of immunosuppression.qAnti-HBc,on the other hand,cannot be relied on as a single diagnostic test to address all problems,and its diagnostic and prognostic potential may be greatly increased when paired with qHBsAg.Commercial qAnti-HBc diagnostic kits are currently not widely available.Because many methodologies are only semi-quantitative,comparing data from various studies and defining universal cut-off values remains difficult.This review focuses on the clinical utility of qAnti-HBc and qHBsAg in chronic hepatitis B management. 展开更多
关键词 quantitative hepatitis B core antibody quantitative hepatitis B surface antigen Chronic hepatitis B management Novels viral biomarkers
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Simplified quantitative analysis method and its application in the insitu synthesized copper-based azide chips
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作者 Jie Ren Yunfeng Li +3 位作者 Mingyu Li Xingyu Wu Jiabao Wang Qingxuan Zeng 《Defence Technology(防务技术)》 SCIE EI CAS CSCD 2024年第2期309-316,共8页
Copper-based azide(Cu(N_(3))2 or CuN_(3),CA)chips synthesized by in-situ azide reaction and utilized in miniaturized explosive systems has become a hot research topic in recent years.However,the advantages of in-situ ... Copper-based azide(Cu(N_(3))2 or CuN_(3),CA)chips synthesized by in-situ azide reaction and utilized in miniaturized explosive systems has become a hot research topic in recent years.However,the advantages of in-situ synthesis method,including small size and low dosage,bring about difficulties in quantitative analysis and differences in ignition capabilities of CA chips.The aim of present work is to develop a simplified quantitative analysis method for accurate and safe analysis of components in CA chips to evaluate and investigate the corresponding ignition ability.In this work,Cu(N_(3))2 and CuN_(3)components in CA chips were separated through dissolution and distillation by utilizing the difference in solubility and corresponding content was obtained by measuring N_(3)-concentration through spectrophotometry.The spectrophotometry method was optimized by studying influencing factors and the recovery rate of different separation methods was studied,ensuring the accuracy and reproducibility of test results.The optimized method is linear in range from 1.0-25.0 mg/L,with a correlation coefficient R^(2)=0.9998,which meets the requirements of CA chips with a milligram-level content test.Compared with the existing ICP method,component analysis results of CA chips obtained by spectrophotometry are closer to real component content in samples and have satisfactory accuracy.Moreover,as its application in miniaturized explosive systems,the ignition ability of CA chips with different component contents for direct ink writing CL-20 and the corresponding mechanism was studied.This study provided a basis and idea for the design and performance evaluation of CA chips in miniaturized explosive systems. 展开更多
关键词 Copper-based azide chips SPECTROPHOTOMETRY Separation method quantitative analysis Ignition ability
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Artificial Immune Detection for Network Intrusion Data Based on Quantitative Matching Method
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作者 CaiMing Liu Yan Zhang +1 位作者 Zhihui Hu Chunming Xie 《Computers, Materials & Continua》 SCIE EI 2024年第2期2361-2389,共29页
Artificial immune detection can be used to detect network intrusions in an adaptive approach and proper matching methods can improve the accuracy of immune detection methods.This paper proposes an artificial immune de... Artificial immune detection can be used to detect network intrusions in an adaptive approach and proper matching methods can improve the accuracy of immune detection methods.This paper proposes an artificial immune detection model for network intrusion data based on a quantitative matching method.The proposed model defines the detection process by using network data and decimal values to express features and artificial immune mechanisms are simulated to define immune elements.Then,to improve the accuracy of similarity calculation,a quantitative matching method is proposed.The model uses mathematical methods to train and evolve immune elements,increasing the diversity of immune recognition and allowing for the successful detection of unknown intrusions.The proposed model’s objective is to accurately identify known intrusions and expand the identification of unknown intrusions through signature detection and immune detection,overcoming the disadvantages of traditional methods.The experiment results show that the proposed model can detect intrusions effectively.It has a detection rate of more than 99.6%on average and a false alarm rate of 0.0264%.It outperforms existing immune intrusion detection methods in terms of comprehensive detection performance. 展开更多
关键词 Immune detection network intrusion network data signature detection quantitative matching method
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Determination of Consistency between Quantitative Evaluation and Non-quantitative Evaluation
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作者 史倩 刘国华 《Journal of Donghua University(English Edition)》 CAS 2023年第3期334-342,共9页
The combination of quantitative evaluation(QE)and non-quantitative evaluation(NQE)is an important evaluation tool in the fields of academic level evaluation(e.g.,EasyChair,Academic paper review form)and internet commo... The combination of quantitative evaluation(QE)and non-quantitative evaluation(NQE)is an important evaluation tool in the fields of academic level evaluation(e.g.,EasyChair,Academic paper review form)and internet commodity evaluation(e.g.,Amazon’s review,Feedback).But the inconsistency between QE and NQE greatly reduces the correctness and usability of the evaluation.Therefore,it is a necessary task to judge whether QE is consistent with NQE.In this paper,the predicate formula satisfiability problem is firstly reduced in polynomial time to the consistency problem of QE and NQE,and the uncertainty of the consistency problem is proved.Then the approximate solution to the problem is investigated by using a natural language processing method,which performs sentiment analysis on NQE and finally invokes a database query statement to determine whether QE is consistent with NQE.The results shed light on the feasibility of using the natural language processing method to solve undecidable problems. 展开更多
关键词 quantitative evaluation(QE) non-quantitative evaluation(NQE) satisfiability problem natural language processing sentiment analysis
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Radar Quantitative Precipitation Estimation Based on the Gated Recurrent Unit Neural Network and Echo-Top Data 被引量:2
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作者 Haibo ZOU Shanshan WU Miaoxia TIAN 《Advances in Atmospheric Sciences》 SCIE CAS CSCD 2023年第6期1043-1057,共15页
The Gated Recurrent Unit(GRU) neural network has great potential in estimating and predicting a variable. In addition to radar reflectivity(Z), radar echo-top height(ET) is also a good indicator of rainfall rate(R). I... The Gated Recurrent Unit(GRU) neural network has great potential in estimating and predicting a variable. In addition to radar reflectivity(Z), radar echo-top height(ET) is also a good indicator of rainfall rate(R). In this study, we propose a new method, GRU_Z-ET, by introducing Z and ET as two independent variables into the GRU neural network to conduct the quantitative single-polarization radar precipitation estimation. The performance of GRU_Z-ET is compared with that of the other three methods in three heavy rainfall cases in China during 2018, namely, the traditional Z-R relationship(Z=300R1.4), the optimal Z-R relationship(Z=79R1.68) and the GRU neural network with only Z as the independent input variable(GRU_Z). The results indicate that the GRU_Z-ET performs the best, while the traditional Z-R relationship performs the worst. The performances of the rest two methods are similar.To further evaluate the performance of the GRU_Z-ET, 200 rainfall events with 21882 total samples during May–July of 2018 are used for statistical analysis. Results demonstrate that the spatial correlation coefficients, threat scores and probability of detection between the observed and estimated precipitation are the largest for the GRU_Z-ET and the smallest for the traditional Z-R relationship, and the root mean square error is just the opposite. In addition, these statistics of GRU_Z are similar to those of optimal Z-R relationship. Thus, it can be concluded that the performance of the GRU_ZET is the best in the four methods for the quantitative precipitation estimation. 展开更多
关键词 quantitative precipitation estimation Gated Recurrent Unit neural network Z-R relationship echo-top height
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Application of X-band Polarimetric Phased-array Radars in Quantitative Precipitation Estimation 被引量:1
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作者 张羽 刘显通 +3 位作者 陈炳洪 冯嘉宝 曾琳 田聪聪 《Journal of Tropical Meteorology》 SCIE 2023年第1期142-152,共11页
The performance of different quantitative precipitation estimation(QPE) relationships is examined using the polarimetric variables from the X-band polarimetric phased-array radars in Guangzhou,China.Three QPE approach... The performance of different quantitative precipitation estimation(QPE) relationships is examined using the polarimetric variables from the X-band polarimetric phased-array radars in Guangzhou,China.Three QPE approaches,namely,R(ZH),R(ZH,ZDR) and R(KDP),are developed for horizontal reflectivity,differential reflectivity and specific phase shift rate,respectively.The estimation parameters are determined by fitting the relationships to the observed radar variables using the T-matrix method.The QPE relationships were examined using the data of four heavy precipitation events in southern China.The examination shows that the R(ZH) approach performs better for the precipitation rate less than 5 mm h-1, and R(KDP) is better for the rate higher than 5 mm h-1, while R(ZH,ZDR) has the worst performance.An adaptive approach is developed by taking the advantages of both R(ZH) and R(KDP) approaches to improve the QPE accuracy. 展开更多
关键词 X-band polarimetric phased-array radar raindrop spectrum quantitative precipitation estimation
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Deep learning assisted variational Hilbert quantitative phase imaging 被引量:1
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作者 Zhuoshi Li Jiasong Sun +7 位作者 Yao Fan Yanbo Jin Qian Shen Maciej Trusiak Maria Cywińska Peng Gao Qian Chen Chao Zuo 《Opto-Electronic Science》 2023年第4期1-11,共11页
We propose a high-accuracy artifacts-free single-frame digital holographic phase demodulation scheme for relatively lowcarrier frequency holograms-deep learning assisted variational Hilbert quantitative phase imaging(... We propose a high-accuracy artifacts-free single-frame digital holographic phase demodulation scheme for relatively lowcarrier frequency holograms-deep learning assisted variational Hilbert quantitative phase imaging(DL-VHQPI).The method,incorporating a conventional deep neural network into a complete physical model utilizing the idea of residual compensation,reliably and robustly recovers the quantitative phase information of the test objects.It can significantly alleviate spectrum-overlapping-caused phase artifacts under the slightly off-axis digital holographic system.Compared to the conventional end-to-end networks(without a physical model),the proposed method can reduce the dataset size dramatically while maintaining the imaging quality and model generalization.The DL-VHQPI is quantitatively studied by numerical simulation.The live-cell experiment is designed to demonstrate the method's practicality in biological research.The proposed idea of the deep learning-assisted physical model might be extended to diverse computational imaging techniques. 展开更多
关键词 quantitative phase imaging digital holography deep learning high-throughput imaging
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Solubility study of hydrogen in direct coal liquefaction solvent based on quantitative structure–property relationships model
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作者 Xiao-Bin Zhang A.Rajendran +1 位作者 Xing-Bao Wang Wen-Ying Li 《Chinese Journal of Chemical Engineering》 SCIE EI CAS CSCD 2023年第12期250-258,共9页
Direct coal liquefaction(DCL)is an important and effective method of converting coal into high-valueadded chemicals and fuel oil.In DCL,heating the direct coal liquefaction solvent(DCLS)from low to high temperature an... Direct coal liquefaction(DCL)is an important and effective method of converting coal into high-valueadded chemicals and fuel oil.In DCL,heating the direct coal liquefaction solvent(DCLS)from low to high temperature and pre-hydrogenation of the DCLS are critical steps.Therefore,studying the dissolution of hydrogen in DCLS under liquefaction conditions gains importance.However,it is difficult to precisely determine hydrogen solubility only by experiments,especially under the actual DCL conditions.To address this issue,we developed a prediction model of hydrogen solubility in a single solvent based on the machine-learning quantitative structure–property relationship(ML-QSPR)methods.The results showed that the squared correlation coefficient R^(2)=0.92 and root mean square error RMSE=0.095,indicating the model’s good statistical performance.The external validation of the model also reveals excellent accuracy and predictive ability.Molecular polarization(a)is the main factor affecting the dissolution of hydrogen in DCLS.The hydrogen solubility in acyclic alkanes increases with increasing carbon number.Whereas in polycyclic aromatics,it decreases with increasing ring number,and in hydrogenated aromatics,it increases with hydrogenation degree.This work provides a new reference for the selection and proportioning of DCLS,i.e.,a solvent with higher hydrogen solubility can be added to provide active hydrogen for the reaction and thus reduce the hydrogen pressure.Besides,it brings important insight into the theoretical significance and practical value of the DCL. 展开更多
关键词 Hydrogen solubility Liquefied solvents Predictive model Density generalized function theory quantitative structure-property relationship
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A methodological framework of landslide quantitative risk assessment in areas with incomplete historical landslide information
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作者 LI Xia CHENG Jiu-Long YU De-Hao 《Journal of Mountain Science》 SCIE CSCD 2023年第9期2665-2679,共15页
Landslide risk assessment(LRA)is of great significance to hazard prevention and mitigation.However,the historical landslide information is incomplete in most areas,which makes the landslide quantitative risk assessmen... Landslide risk assessment(LRA)is of great significance to hazard prevention and mitigation.However,the historical landslide information is incomplete in most areas,which makes the landslide quantitative risk assessment(LQRA)extremely difficult.This research proposed a set of frameworks for LQRA,so as to achieve LQRA in areas with incomplete historical landslide information.Firstly,we constructed the convolutional neural network(CNN)model suitable for landslide susceptibility assessment(LSA)by studying the structure and hyperparameters optimization of CNN.Secondly,we proposed a method to calculate the temporal probability by using the Poisson model based on the time range of historical landslides occurrence,and then conducted landslide hazard assessment(LHA).Then,we established a mathematical model for landslide intensity of shallow landslide based on landslide area and slope,aiming at solving the problem that it is difficult to calculate landslide intensity due to the lack of landslide volume and velocity.Based on the landslide intensity and the hazard-resistant capacity of the element at risk,we assessed the landslide vulnerability.Finally,population risk map and economic risk map are obtained based on the landslide hazard,vulnerability,and estimated value of the elements at risk.The proposed LQRA framework was applied to Tumen City,China for testing and field validation.From the results,the CNN model built can help improve the accuracy of LSA.The proposed temporal probability calculation method is conducive to the completion of LHA in areas with incomplete historical landslide information.The established landslide intensity mathematical model has certain credibility.Since the landslide risk map is obtained through appropriate simplification and substitution estimation,its final value cannot be used as an accurate prediction of future losses,but it can be used as a reference for the extent of potential losses,so as to determine the areas where hazard prevention and mitigation measures need to be taken. 展开更多
关键词 LANDSLIDE quantitative risk assessment Convolutional neural network Hazard assessment VULNERABILITY
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Quantitative morphometric analysis of a deep-water channel in the Taranaki Basin, New Zealand
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作者 Wei Wu Guangxu Wang +4 位作者 Changsong Lin Weiqing Liu Quan Li Zhendong Feng Shuyuan Ning 《Acta Oceanologica Sinica》 SCIE CAS CSCD 2023年第5期42-56,共15页
The morphological changes of deep-water channels have an important influence on the distributions of channel sand reservoirs,so it is important to explore the morphological change process of deep-water channel for the... The morphological changes of deep-water channels have an important influence on the distributions of channel sand reservoirs,so it is important to explore the morphological change process of deep-water channel for the exploration and development of deep-water oil and gas.Based on a typical sinuous Quaternary channel(Channel I)in the Taranaki Basin,New Zealand,a variety of seismic interpretation techniques were applied to quantitatively characterize the morphological characteristics of the Channel I,and the relationships between the quantitative parameters and the morphological changes of the Channel I,as well as the controlling factors affecting those morphological changes,were discussed.The results are as follows:(1)in the quantitative analysis,six parameters were selected:the channel depth,width,sinuosity,and aspect ratio(width/depth),the channel swing amplitude(λ)and the channel bend frequency(ω);(2)according to the quantitative morphological parameters of the channel(mainly including three parameters such as channel sinuosity,ωandλ),the Channel I was divided into three types:the low-sinuous channel(LSC),the high-sinuous channel(HSC),the moderate-sinuous channel(MSC).U-shaped channel cross-sections developed in the LSC,V-shaped channel cross-sections developed in the HSC,including inclined-V and symmetric-V cross-sections,and dish-shaped channel cross-sections developed in the MSC;(3)the morphological characteristics of the LSC and MSC were related to their widths and depths,while the morphology of the HSC was greatly affected by the channel width,a change in depth did not affect the HSC morphology;(4)the morphological changes of the Channel I were controlled mainly by the slope gradient,the restricted capacity of the channel and the differential in fluid properties. 展开更多
关键词 QUATERNARY deep-water channel geometrical morphology quantitative analysis Taranaki Basin New Zealand
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Evaluation of Reference Genes for Quantitative Real-Time PCR Analysis in Manila Clam Ruditapes philippinarum Under Hypoxic Stress
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作者 JING Hao ZHOU Liqing +4 位作者 GONG Miao TU Kang LIU Zhihong WU Biao SUN Xiujun 《Journal of Ocean University of China》 SCIE CAS CSCD 2023年第4期1059-1067,共9页
Quantitative real-time PCR(qRT-PCR)has been widely used for gene expression analysis,and selection of reference genes is a key point to obtain accurate results.To find out optimal reference genes for qRT-PCR in Manila... Quantitative real-time PCR(qRT-PCR)has been widely used for gene expression analysis,and selection of reference genes is a key point to obtain accurate results.To find out optimal reference genes for qRT-PCR in Manila clam Ruditapes philippinarum in response to hypoxia,different tissues were used and compared to evaluate the stability of candidate reference genes under low oxygen stress(DO 0.5mgL^(−1) and DO 2.0mgL^(−1))and normal condition(DO 7.5mgL^(−1)).Seven candidate reference genes were selected to evaluate the stability of their expression levels.The reference genes were evaluated by Delta Ct,BestKeeper,NormFinder and geNorm,and then screened by RefFinder calculation.Under hypoxic stress of 0.5mgL^(−1),the most suitable reference gene for gill and hepatopancreas was RPL31,and the optimal reference genes for axe foot and adductor muscle were TUB and HIS,respectively.For hypoxic stress of 2.0mgL^(−1),the most stable reference gene for gill and hepatopancreas was RPL31,and the optimal reference genes for axe foot and adductor muscle were RPS23 and EF1A,respectively.At the normal condition,HIS and EF1A were identified as the optimal internal reference genes in gill and hepatopancreas respectively,and GFRP2 was the best internal reference gene for axe foot and adductor muscle.The present findings will provide important basis for the selection of reference genes for qRT-PCR analysis of gene expression level in bivalves under hypoxic stress,which might be helpful for the analysis of other molluscs too. 展开更多
关键词 CLAM reference gene HYPOXIA quantitative real-time PCR
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Quantitative characterization of tight gas sandstone reservoirs using seismic data via an integrated rock-physics-based framework
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作者 Zhi-Qi Guo Xiao-Ying Qin Cai Liu 《Petroleum Science》 SCIE EI CAS CSCD 2023年第6期3428-3440,共13页
Seismic characterizing of tight gas sandstone (TGS) reservoirs is essential for identifying promising gas-bearing regions. However, exploring the petrophysical significance of seismic-inverted elastic properties is ch... Seismic characterizing of tight gas sandstone (TGS) reservoirs is essential for identifying promising gas-bearing regions. However, exploring the petrophysical significance of seismic-inverted elastic properties is challenging due to the complex microstructures in TGSs. Meanwhile, interbedded structures of sandstone and mudstone intensify the difficulty in accurately extracting the crucial tight sandstone properties. An integrated rock-physics-based framework is proposed to estimate the reservoir quality of TGSs from seismic data. TGSs with complex pore structures are modeled using the double-porosity model, providing a practical tool to compute rock physics templates for reservoir parameter estimation. The VP/VS ratio is utilized to predict the cumulative thickness of the TGS reservoirs within the target range via the threshold value evaluated from wireline logs for lithology discrimination. This approach also facilitates better capturing the elastic properties of the TGSs for quantitative seismic interpretation. Total porosity is estimated from P-wave impedance using the correlation obtained based on wireline log analysis. After that, the three-dimensional rock-physics templates integrated with the estimated total porosity are constructed to interpret microfracture porosity and gas saturation from velocity ratio and bulk modulus. The integrated framework can optimally estimate the parameters dominating the reservoir quality. The results of the indicator proposed based on the obtained parameters are in good agreement with the gas productions and can be utilized to predict promising TGS reservoirs. Moreover, the results suggest that considering microfracture porosity allows a more accurate prediction of high-quality reservoirs, further validating the applicability of the proposed method in the studied region. 展开更多
关键词 Tight gas sandstone reservoirs quantitative reservoir characterization Rock-physics-based framework Microfracture porosity Rock physics template
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Spectra-assisted laser focusing in quantitative analysis of laser-induced breakdown spectroscopy for copper alloys
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作者 李守杰 郑荣儿 +5 位作者 出口祥啓 叶旺全 田野 郭金家 李颖 卢渊 《Plasma Science and Technology》 SCIE EI CAS CSCD 2023年第4期204-209,共6页
Laser-induced breakdown spectroscopy(LIBS)is a capable technique for elementary analysis,while LIBS quantitation is still under development.In quantitation,precise laser focusing plays an important role because it ens... Laser-induced breakdown spectroscopy(LIBS)is a capable technique for elementary analysis,while LIBS quantitation is still under development.In quantitation,precise laser focusing plays an important role because it ensures the distance between the laser and samples.In the present work,we employed spectral intensity as a direct way to assist laser focusing in LIBS quantitation for copper alloys.It is found that both the air emission and the copper line could be used to determine the position of the sample surface by referencing the intensity maximum.Nevertheless,the fine quantitation was only realized at the position where the air emission(e.g.O(I)777.4 nm)reached intensity maximum,and also in this way,a repeatable quantitation was successfully achieved even after 120 days.The results suggested that the LIBS quantitation was highly dependent on the focusing position of the laser,and spectra-assisted focusing could be a simple way to find the identical condition for different samples’detection.In the future,this method might be applicable in field measurements for LIBS analysis of solids. 展开更多
关键词 LIBS laser focusing spectra assistance quantitative analysis copper alloys
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Source Quantitative Identification by Reference-Based Cubic Blind Deconvolution Algorithm
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作者 Xin Luo Zhousuo Zhang +1 位作者 Teng Gong Yongjie Li 《Chinese Journal of Mechanical Engineering》 SCIE EI CAS CSCD 2023年第4期180-195,共16页
The semi-blind deconvolution algorithm improves the separation accuracy by introducing reference information.However,the separation performance depends largely on the construction of reference signals.To improve the r... The semi-blind deconvolution algorithm improves the separation accuracy by introducing reference information.However,the separation performance depends largely on the construction of reference signals.To improve the robustness of the semi-blind deconvolution algorithm to the reference signals and the convergence speed,the reference-based cubic blind deconvolution algorithm is proposed in this paper.The proposed algorithm can be combined with the contribution evaluation to provide trustworthy guidance for suppressing satellite micro-vibration.The normalized reference-based cubic contrast function is proposed and the validity of the new contrast function is theoretically proved.By deriving the optimal step size of gradient iteration under the new contrast function,we propose an efficient adaptive step optimization method.Furthermore,the contribution evaluation method based on vector projection is presented to implement the source contribution evaluation.Numerical simulation analysis is carried out to validate the availability and superiority of this method.Further tests given by the simulated satellite experiment and satellite ground experiment also confirm the effectiveness.The signals of control moment gyroscope and flywheel were extracted,respectively,and the contribution evaluation of vibration sources to the sensitive load area was realized.This research proposes a more accurate and robust algorithm for the source separation and provides an effective tool for the quantitative identification of the mechanical vibration sources. 展开更多
关键词 quantitative identification Reference-based cubic contrast function Semi-blind deconvolution Satellite micro-vibration Adaptive step size
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Analyses and identifications of quantitative trait loci and candidate genes controlling mesocotyl elongation in rice
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作者 ZHANG Xi-juan LAI Yong-cai +11 位作者 MENG Ying TANG Ao DONG Wen-jun LIU You-hong LIU Kai WANG Li-zhi YANG Xian-li WANG Wen-long DING Guo-hua JIANG Hui REN Yang JIANG Shu-kun 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2023年第2期325-340,共16页
Rice direct seeding has the significant potential to save labor and water,conserve environmental resources,and reduce greenhouse gas emissions tremendously.Therefore,rice direct seeding is becoming the major cultivati... Rice direct seeding has the significant potential to save labor and water,conserve environmental resources,and reduce greenhouse gas emissions tremendously.Therefore,rice direct seeding is becoming the major cultivation technology applied to rice production in many countries.Identifying and utilizing genes controlling mesocotyl elongation is an effective approach to accelerate breeding procedures and meet the requirements for direct-seeded rice(DSR) production.This study used a permanent mapping population with 144 recombinant inbred lines(RILs) and 2 828 bin-markers to detect quantitative trait loci(QTLs) associated with mesocotyl length in 2019 and 2020.The mesocotyl lengths of the rice RILs and their parents,Lijiangxintuanheigu(LTH) and Shennong 265(SN265),were measured in a growth chamber at 30°C in a dark environment.A total of 16 QTLs for mesocotyl length were identified on chromosomes 1(2),2(4),3(2),4,5,6,7,9,11(2),and 12.Seven of these QTLs,including qML1a,qML1b,qML2d,qML3a,qML3b,qML5,and qML11b,were reproducibly detected in both years via the interval mapping method.The major QTL,qML3a,was reidentified in two years via the composite interval mapping method.A total of 10 to 413 annotated genes for each QTL were identified in their smallest genetic intervals of 37.69 kb to 2.78 Mb,respectively.Thirteen predicted genes within a relatively small genetic interval(88.18 kb) of the major mesocotyl elongation QTL,qML3a,were more thoroughly analyzed.Finally,the coding DNA sequence variations among SN265,LTH,and Nipponbare indicated that the LOC_Os03g50550 gene was the strongest candidate gene for the qML3a QTL controlling the mesocotyl elongation.This LOC_Os03g50550 gene encodes a mitogen-activated protein kinase.Relative gene expression analysis using qRT-RCR further revealed that the expression levels of the LOC_Os03g50550 gene in the mesocotyl of LTH were significantly lower than in the mesocotyl of SN265.In conclusion,these results further strengthen our knowledge about rice’s genetic mechanisms of mesocotyl elongation.This investigation’s discoveries will help to accelerate breeding programs for new DSR variety development. 展开更多
关键词 japonica rice direct-seeded rice(DSR) mesocotyl elongation quantitative trait loci candidate gene
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Quantitative estimation of bubble volume fraction of submarine seep plumes by modeling seismic oceanography data
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作者 Tonggang HAN Jiangxin CHEN +3 位作者 Leonardo AZEVEDO Bingshou HE Huaning XU Rui YANG 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2023年第2期673-686,共14页
Submarine seep plumes are a natural phenomenon in which different types of gases migrate through deep or shallow subsurface sediments and leak into seawater in pressure gradient.When detected using acoustic data,the l... Submarine seep plumes are a natural phenomenon in which different types of gases migrate through deep or shallow subsurface sediments and leak into seawater in pressure gradient.When detected using acoustic data,the leaked gases frequently exhibit a flame-like structure.We numerically modelled the relationship between the seismic response characteristic and bubble volume fraction to establish the bubble volume fraction in the submarine seep plume.Results show that our models are able to invert and predict the bubble volume fraction from field seismic oceanography data,by which synthetic seismic sections in different dominant frequencies could be numerically simulated,seismic attribute sections(e.g.,instantaneous amplitude,instantaneous frequency,and instantaneous phase)extracted,and the correlation between the seismic attributes and bubble volume fraction be quantitatively determined with functional equations.The instantaneous amplitude is positively correlated with bubble volume fraction,while the instantaneous frequency and bubble volume fraction are negatively correlated.In addition,information entropy is introduced as a proxy to quantify the relationship between the instantaneous phase and bubble volume fraction.As the bubble volume fraction increases,the information entropy of the instantaneous phase increases rapidly at the beginning,followed by a slight upward trend,and finally stabilizes.Therefore,under optimal noise conditions,the bubble volume fraction of submarine seep plumes can be inverted and predicted based on seismic response characteristics in terms of seismic attributes. 展开更多
关键词 seismic oceanography submarine seep plumes bubble volume fraction seismic response characteristics seismic attribute analysis quantitative analysis
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Quantitative characterization of vertical zonation of Mesozoic granite weathering reservoirs in the coastal area of eastern Fujian Province,China
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作者 Jing-Song Hu Yi-Ming Jiang +3 位作者 Hua-Feng Tang Wen-Rui Ma Peng Tao Ning-Yuan Sun 《Petroleum Science》 SCIE EI CSCD 2023年第5期2664-2682,共19页
Weathering crust reservoirs have obvious vertical zonation,which is the focus of weathering crust reservoir research,but there is a lack of quantitative characterization indexes.To achieve the quantitative characteriz... Weathering crust reservoirs have obvious vertical zonation,which is the focus of weathering crust reservoir research,but there is a lack of quantitative characterization indexes.To achieve the quantitative characterization of granite weathering crust reservoir and provide the basis for oil exploration of granite weathering crust buried hill reservoir,in this paper,the vertical zonation of granite weathering crust reservoir is quantitatively divided by testing and analyzing the uniaxial compressive strength(UCS),magnetic susceptibility(MS),permeability,and chemical index of alteration(CIA)of the Mesozoic granite weathering crust in the coastal area of eastern Fujian.The results show that the granite weathering crust reservoir can be divided into four zones vertically:a soil zone(SZ),weathered and dissolved zone(WDZ),fracture zone(FZ),and bedrock zone(BZ).A cataclastic area is developed in the FZ and BZ,in which structural fractures are well-developed,the fracture surface density is usually greater than 200 m/m^(2),and the contribution to the fractures in the rock mass is up to about 50%,making this the sweet spot of the reservoir.In the SZ,the rocks are loose,and the pores are well-developed.The UCS is less than 10 MPa,and the average rate of change of the UCS(Δ_(σ))is 0.90.The average permeability is 2823.00 mD,and the average rate of change of the permeability(Δ_(κ))is 5.13.The average CIA is 74.9%.The average clay mineral content is 7%.The rocks in the WDZ have been significantly weathered by physical and chemical processes,and the weathering fractures and dissolution pores are well-developed.The average UCS is 18.2 MPa,and the averageΔ_(σ)is 0.70.The average permeability is 143.80 mD,and averageΔ_(κ)is 4.17.The average CIA is 65.3%.The average clay mineral content is 4%.Under the influence of tectonic movement and physical weathering,the rocks in the FZ have developed structural fractures and a few weathered fractures.The average UCS is 57.9 MPa,and the averageΔ_(σ)is 0.18.The average permeability is 5.50 mD,and the averageΔ_(κ)is 2.55.The average CIA is 61.6%.The average clay mineral content is 2%.In the BZ,the rocks are intact and hard.The average UCS is 69.9 MPa,and the average Ds is 0.13.The average permeability is 1.46 mD,and the averageΔ_(κ)is 1.43.The average CIA is 57.8%.The average clay mineral content is less than 1%.The multi-parameter combination of the UCS,Δ_(σ),permeability,Δ_(κ),CIA,and clay mineral content achieved good results in the division of the zones of the weathering crust.The UCS increases gradually from top to bottom,while Ds,permeability,Δ_(κ),CIA,and clay mineral content all decrease gradually.In addition,based on the petrophysical parameters of the rocks,including the density,resistivity,and acoustic velocity,a good division effect was also achieved,which can provide a basis for the vertical zonation of the granite buried-hill weathering crust reservoir. 展开更多
关键词 Granite weathering crust Vertical zonation of reservoir quantitative characterization Eastern Fujian Mesozoic granite
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Quantitative Parameters Analysis for Prenatally Echocardiographic Diagnosis of Atrioventricular Septal Defects
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作者 Xiaoxue Zhou Tingyang Yang +8 位作者 Ye Zhang Yanping Ruan Jiancheng Han Xiaowei Liu Ying Zhao Xiaoyan Gu Tingting Liu Hairui Wang Yihua He 《Congenital Heart Disease》 SCIE 2023年第3期387-397,共11页
Background:Atrioventricular septal defects(AVSDs)are screened and diagnosed usually rely on the imaging characteristics of fetal echocardiography(FE).However,diagnosis on images is heavily depended on sonographers’ex... Background:Atrioventricular septal defects(AVSDs)are screened and diagnosed usually rely on the imaging characteristics of fetal echocardiography(FE).However,diagnosis on images is heavily depended on sonographers’experience and the quantitative data are rarely studied.Objective:This study aimed to realize the prenatal diagnosis of AVSDs by analyzing the quantitative data on FE.Methods:One hundred and thirteen cardiac quantitative data was analyzed in 370 normal and 49 AVSDs fetuses retrospectively.The top six with the highest diagnostic accuracy rate were acquired according to the area under the curve(AUC),and the diagnostic value of six variables was analyzed.Results:Six parameters obtained on the four-chamber view(4CHV),including the atrial to ventricular length ratio in end-diastole(AVLR-ED),AVLR-ED combined with the atrial to ventricular length ratio in end-systole(AVLR-ES),quantile score(Q score)of AVLR-ED,Q score of AVLR-ES,Q score of ventricle length in end-diastole(VL-ED),and AVLR-ES,were the top six with the highest diagnostic value,and the AUC was 0.99(95%CI 0.99–1.00),0.99(95%CI 0.99–1.00),0.99(95%CI 0.98–1.00),0.95(95%CI 0.91–0.99),0.93(95%CI 0.87–0.99),and 0.91(95%CI 0.83–1.00),respectively.And within the 20%false positive rate,the diagnostic sensitivity was greater than 100%,100%,100%,90%,90%,and 88%,respectively.Conclusions:Six variables could be used for prenatal diagnosis of AVSDs.Among them,AVLR-ED and Q score of AVLR-ED,obtained on the 4CHV,were more convenient to acquire and had higher diagnostic accuracy. 展开更多
关键词 AVSDs FETUS ECHOCARDIOGRAPHY Q score quantitative
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Establishment and Modification of Ninety-seven Pneumococcal Serotyping Assays Based on Quantitative Real-time Polymerase Chain Reaction
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作者 CHE Jie CHEN Bo Han +5 位作者 XU Li GAO Yuan YUE Meng Meng CHEN Zi Man ZHANG Mao Jun SHAO Zhu Jun 《Biomedical and Environmental Sciences》 SCIE CAS CSCD 2023年第9期787-799,共13页
Objective To establish and modify quantitative real-time polymerase chain reaction(qPCR)-based serotyping assays to distinguish 97 pneumococcal serotypes.Methods A database of capsular polysaccharide(cps)loci sequence... Objective To establish and modify quantitative real-time polymerase chain reaction(qPCR)-based serotyping assays to distinguish 97 pneumococcal serotypes.Methods A database of capsular polysaccharide(cps)loci sequences was generated,covering 97 pneumococcal serotypes.Bioinformatics analyses were performed to identify the cps loci structure and target genes related to different pneumococcal serotypes with specific SNPs.A total of 27 novel qPCR serotyping assay primers and probes were established based on qPCR,while 27 recombinant plasmids containing serotype-specific DNA sequence fragments were constructed as reference target sequences to examine the specificity and sensitivity of the qPCR assay.A panel of pneumococcal reference strains was employed to evaluate the capability of pneumococcal serotyping.Results A total of 97 pneumococcal serotyping assays based on qPCR were established and modified,which included 64 serotypes previously reported as well as an additional 33 serotypes.Twenty-seven novel qPCR serotyping target sequences were implemented in the pneumococcal qPCR serotyping system.A total of 97 pneumococcal serotypes,which included 52 individual serotypes and 45 serotypes belonging to 20 serogroups,could not be identified as individual serotypes.The sensitivity of qPCR assays based on 27 target sequences was 1–100 copies/μL.The specificity of the qPCR assays was 100%,which were tested by a panel of 90 serotypes of the pneumococcal reference strains.Conclusion A total of 27 novel qPCR assays were established and modified to analyze 97pneumococcal serotypes. 展开更多
关键词 Streptococcus pneumoniae SEROTYPING cps loci quantitative real-time PCR(qPCR)
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