Multidrug-resistant(MDR)Enterobacteriaceae critically threaten duck farming and public health.The phenotypes,genotypes,and associated mobile genetic elements(MGEs)of MDR Enterobacteriaceae isolated from 6 duck farms i...Multidrug-resistant(MDR)Enterobacteriaceae critically threaten duck farming and public health.The phenotypes,genotypes,and associated mobile genetic elements(MGEs)of MDR Enterobacteriaceae isolated from 6 duck farms in Zhejiang Province,China,were investigated.A total of 215 isolates were identified as Escherichia coli(64.65%),Klebsiella pneumoniae(12.09%),Proteus mirabilis(10.23%),Salmonella(8.84%),and Enterobacter cloacae(4.19%).Meanwhile,all isolates were resistant to at least two antibiotics.Most isolates carried tet(A)(85.12%),blaTEM(78.60%)and sul1(67.44%)resistance genes.Gene co-occurrence analysis showed that the resistance genes were associated with IS26 and integrons.A conjugative IncFII plasmid pSDM004 containing all the above MGEs was detected in Proteus mirabilis isolate SDM004.This isolate was resistant to 18 antibiotics and carried the blaNDM-5 gene.MGEs,especially plasmids,are the primary antibiotic resistance gene transmission route in duck farms.These findings provide a theoretical basis for the rational use of antibiotics in farms which are substantial for evaluating public health and food safety.展开更多
This study explored the combined effects of Bacillus subtilis inoculation with biochar on the evolution of bacterial communities,antibiotic resistance genes(ARGs),and mobile genetic elements(MGEs)during the composting...This study explored the combined effects of Bacillus subtilis inoculation with biochar on the evolution of bacterial communities,antibiotic resistance genes(ARGs),and mobile genetic elements(MGEs)during the composting of chicken manure.The results showed that B.subtilis inoculation combined with biochar increased bacterial abundance and diversity as well as prolonged the compost thermophilic period.Promoted organic matter biodegradation and facilitated the organic waste compost humification process,reduced the proliferation of ARGs by altering the bacterial composition.Firmicutes and Actinobacteriota were the main resistant bacteria related to ARGs and MGEs.The decrease in ARGs and MGEs was associated with the reduction in the abundance of related host bacteria.Compost inoculation with B.subtilis and the addition of biochar could promote nutrient transformation,reduce the increase in ARGs and MGEs,and increase the abundance of beneficial soil taxa.展开更多
The accessibility of tetracycline resistance gene (tetG) into the pores of activated carbon (AC), as well as the impact of the pore size distribution (PSD) of AC on the uptake capacity of tetG, were investigated using...The accessibility of tetracycline resistance gene (tetG) into the pores of activated carbon (AC), as well as the impact of the pore size distribution (PSD) of AC on the uptake capacity of tetG, were investigated using eight types of AC (four coal-based and four wood-based). AC showed the capability to admit tetG and the average reduction of tetG for coal-based and wood-based ACs at the AC dose of 1 g·L<sup>-1</sup> was 3.12 log and 3.65 log, respectively. The uptake kinetic analysis showed that the uptake of the gene followed the pseudo-second-order kinetics reaction, and the uptake rate constant for the coal-based and wood-based ACs was in the range of 5.97 × 10<sup>-12</sup> - 4.64 × 10<sup>-9</sup> and 7.02 × 10<sup>-11</sup> - 1.59 × 10<sup>-8</sup> copies·mg<sup>-1</sup>·min<sup>-1</sup>, respectively. The uptake capacity analysis by fitting the obtained experiment data with the Freundlich isotherm model indicated that the uptake constant (K<sub>F</sub>) values were 1.71 × 10<sup>3</sup> - 8.00 × 10<sup>9</sup> (copies·g<sup>-1</sup>)<sup>1-1/n</sup> for coal-based ACs and 7.00 × 10<sup>8</sup> - 3.00 × 10<sup>10</sup> (copies·g<sup>-1</sup>)<sup>1-1/n</sup> for wood-based ones. In addition, the correlation analysis between K<sub>F</sub> values and pore volume as well as pore surface at different pore size regions of ACs showed that relatively higher positive correlation was found for pores of 50 - 100 Å, suggesting ACs with more pores in this size region can uptake more tetG. The findings of this study are valuable as reference for optimizing the adsorption process regarding antibiotic resistance-related concerns in drinking water treatment.展开更多
Comprehensive studies of the effects of various physical and chemical variables(including heavymetals),antibiotics,and microorganisms in the environment on antibiotic resistance genes are rare.We collected sediment sa...Comprehensive studies of the effects of various physical and chemical variables(including heavymetals),antibiotics,and microorganisms in the environment on antibiotic resistance genes are rare.We collected sediment samples from the Shatian Lake aquaculture area and surrounding lakes and rivers located in Shanghai,China.The spatial distribution of sediment ARGs was assessed by metagenomic analysis that revealed 26 ARG types(510 subtypes),dominated by Multidrug,β-lactam,Aminoglycoside,Glycopeptides,Fluoroquinolone,and Tetracyline.Redundancy discriminant analysis indicated that antibiotics(SAs and MLs)in the aqueous environment and sediment along with water TN and TP were the key variables affecting the abundance distribution of total ARGs.However,the main environmental drivers and key influences differed among the different ARGs.For total ARGs,the environmental subtypes affecting their structural composition and distribution characteristics were mainly antibiotic residues.Procrustes analysis showed a significant correlation between ARGs and microbial communities in the sediment in the survey area.Network analysis revealed that most of the target ARGs were significantly and positively correlated with microorganisms,and a small number of ARGs(e.g.,rpoB,mdtC,and efpA)were highly significantly and positively correlated with microorganisms(e.g.,Knoellia,Tetrasphaera,and Gem-matirosa).Potential hosts for the major ARGs included Actinobacteria,Proteobacteria,and Gemmatimonadetes.Our study provides new insight and a comprehensive assessment of the distribution and abundance of ARGs and the drivers of ARG occurrence and transmission.展开更多
As a new type of environmental pollutant,antibiotic resistance genes(ARGs)pose a huge challenge to global health.Horizontal gene transfer(HGT)represents an important route for the spread of ARGs.The widespread use of ...As a new type of environmental pollutant,antibiotic resistance genes(ARGs)pose a huge challenge to global health.Horizontal gene transfer(HGT)represents an important route for the spread of ARGs.The widespread use of sulfamethazine(SM2)as a broad-spectrum bacteriostatic agent leads to high residual levels in the environment,thereby increasing the spread of ARGs.Therefore,we chose to study the effect of SM2 on the HGT of ARGs mediated by plasmid RP4 from Escherichia coli(E.coli)HB101 to E.coli NK5449 as well as its mechanism of action.The results showed that compared with the control group,SM2 at concentrations of 10 mg/L and 200 mg/L promoted the HGT of ARGs,but transfer frequency decreased at concentrations of 100 mg/L and 500 mg/L.The transfer frequency at 200 mg/L was 3.04×10^(−5),which was 1.34-fold of the control group.The mechanism of SM2 improving conjugation transfer is via enhancement of the mRNA expression of conjugation genes(trbBP,trfAP)and oxidative stress genes,inhibition of the mRNA expression of vertical transfer genes,up regulation of the outer membrane protein genes(ompC,ompA),promotion of the formation of cell pores,and improvement of the permeability of cell membrane to promote the conjugation transfer of plasmid RP4.The results of this study provide theoretical support for studying the spread of ARGs in the environment.展开更多
Wastewater treatment plants(WWTPs)with additional tertiary ultrafiltration membranes and ozonation treatment can improve water quality in receiving rivers.However,the impacts of WWTP upgrade(WWTP-UP)on pathogens carry...Wastewater treatment plants(WWTPs)with additional tertiary ultrafiltration membranes and ozonation treatment can improve water quality in receiving rivers.However,the impacts of WWTP upgrade(WWTP-UP)on pathogens carrying antibiotic resistance genes(ARGs)and virulence factors(VFs)in rivers remain poorly understood.In this study,ARGs,VFs,and their pathogenic hosts were investigated in three rivers impacted by large-scale WWTP-UP.A five-year sampling campaign covered the periods before and after WWTP-UP.Results showed that the abundance of total metagenome-assembled genomes(MAGs)containing both ARGs and VFs in receiving rivers did not decrease substantially after WWTP-UP,but the abundance of MAGs belonging to pathogenic genera that contain both ARGs and VFs(abbreviated as PAVs)declined markedly.'Genome-resolved metagenomics further revealed that WWTP-UP not only reduced most types of VFs and ARGs in PAVs,but also effectively eliminated efflux pump and nutritional VFs carried by PAVs in receiving rivers.WWTP-UP narrowed the pathogenic host ranges of ARGs and VFs and mitigated the cooccurrence of ARGs and VFs in receiving rivers.These findings underline the importance of WWTPUP for the alleviation of pathogens containing both ARGs and VFs in receiving rivers。展开更多
The UV irradiation is used for removing Antibiotic Resistant Bacteria(ARB)and Antibiotic Resistance Genes(ARG)from wastewater treatment.Bacteriophages are viruses that infect within bacteria,are recognized for bacteri...The UV irradiation is used for removing Antibiotic Resistant Bacteria(ARB)and Antibiotic Resistance Genes(ARG)from wastewater treatment.Bacteriophages are viruses that infect within bacteria,are recognized for bacterial control.The influence of some parameters in quantification and performance influencing of pathogen demobilization could be considered in disinfection of wastewater.The comparison of Polyvalent phage(NE1)versus Coliphage(NE4)in suppressing a bacterium Escherichia coli(NDM-1:b-lactam-resistant)with UV irradiation was observed the efficacy in reduction of cells in the disinfection and parameter process.The results with the effect of UV-C irradiation on NDM-1 infected with 1%of NE4 showed a decrease of cells from 8×10^(6)to 2×10^(5)in 60 min with UV-C dose.The NDM1(E.coli)was infected with 1%of NE4(Polyvalent Phage)under magnetic stirring for 1 h,the cells count was 8×10^(6).After 1 h in UV-C e×posure,the cells number reached 3×10^(5).The NDM1 that was e×posed in 1 h of UV-C irradiation and then was infected with 1%of NE4.Cells counting were done 24 h after this procedure.These cells were e×posed in UV-C and showed a reduction in the number of cells from 1×10^(8)to 4×10^(5)after 60 min.The results indicate that bacteriophages can mitigate bacteria species,and combined the conventional water disinfection technologies that can support the microbial safety control strategies.展开更多
Despite coastal mudflats serving as essential ecological zones interconnecting terrestrial/freshwater and marine systems,little is known about the profiles of antibiotic resistance genes(ARGs)in this area.In this stud...Despite coastal mudflats serving as essential ecological zones interconnecting terrestrial/freshwater and marine systems,little is known about the profiles of antibiotic resistance genes(ARGs)in this area.In this study,characteristics of typical ARGs,involving both intracellular(iARGs)and extracellular ARGs(eARGs)at different physical states,were explored in over 1000 km of coastal mudflats in Eastern China.Results indicated the presence of iARGs and eARGs at states of both freely present or attached by particles.The abundance of eARGs was significantly higher than that of iARGs(87.3%vs 12.7%),and their dominance was more significant than those in other habitats(52.7%-76.3%).ARG abundance,especially for eARGs,showed an increasing trend(p<0.05)from southern(Nantong)to northern(Lianyungang)coastalmudflats.Higher salinity facilitated the transformation from iARGs to eARGs,and smaller soil particle size was conducive to the persistence of eARGs in northern coastal mudflats.This study addresses the neglected function of coastal mudflats as eARGs reservoirs.展开更多
Coastal lagoons provide many important services to human society,but their year-round use for aquaculture introduces large amounts of sewage.The contamination of antibiotic resistance genes(ARGs)is therefore of great ...Coastal lagoons provide many important services to human society,but their year-round use for aquaculture introduces large amounts of sewage.The contamination of antibiotic resistance genes(ARGs)is therefore of great concern.In this study,50 ARGs subtypes,two integrase genes(intl1,intl2),and 16S rRNA genes were detected by high-throughput quantitative PCR,and standard curves of all target genes were prepared for quantification.The occurrence and distribution of ARGs in a typical coastal lagoon(XinCun lagoon,China)were comprehensively explored.We detected 44 and 38 subtypes of ARGs in the water and sediment,respectively,and discuss the various factors influencing the fate of ARGs in the coastal lagoon.Macrolides-lincosamides-streptogramins B was the primary ARG type,and macB was the predominant subtype.Antibiotic efflux and antibiotic inactivation were the main ARG resistance mechanisms.The XinCun lagoon was divided into eight functional zones.The ARGs showed a distinct spatial distribution owing to the influence of microbial biomass and anthropogenic activity in different functional zones.Fishing rafts,abandoned fish ponds,the town sewage zone,and mangrove wetlands provided a large quantity of ARGs to the XinCun lagoon.Nutrients and heavy metals also significantly correlated with the fate of the ARGs,especially NO_(2)^(−)-N and Cu,which cannot be ignored.It is noteworthy that lagoon-barrier systems coupled with persistent pollutant inputs result in coastal lagoons acting as a“buffer pool”for ARGs,which can then accumulate and threaten the offshore environment.展开更多
The occurrence of antibiotic resistance genes(ARGs)in various environments has drawn worldwide attention due to their potential risks.Previous studies have reported that a variety of substances can enhance the occurre...The occurrence of antibiotic resistance genes(ARGs)in various environments has drawn worldwide attention due to their potential risks.Previous studies have reported that a variety of substances can enhance the occurrence and dissemination of ARGs.However,few studies have compared the response of ARGs under the stress of different organicmatters in biologicalwastewater treatment systems.In this study,seven organic pollutantswere added into wastewater treatment bioreactors to investigate their impacts on the ARG occurrence in activated sludge.Based on high-throughput sequencing,it was found that the microbial communities and ARG patterns were significantly changed in the activated sludge exposed to these organic pollutants.Compared with the non-antibiotic refractory organic matters,antibiotics not only increased the abundance of ARGs but also significantly changed the ARG compositions.The increase of Gram-negative bacteria(e.g.,Archangium,Prosthecobacter and Dokdonella)carrying ARGs could be the main cause of ARG proliferation.In addition,significant co-occurrence relationships between ARGs and mobile genetic elements were also observed in the sludge samples,which may also affect the ARG diversity and abundance during the organic matter treatment in the bioreactors.Overall,these findings provide new information for better understanding the ARG occurrence and dissemination caused by organic pollutants in wastewater treatment systems.展开更多
The effect of combined antibiotics exposure on nitrogen removal,microbial community assembly and proliferation of antibiotics resistance genes(ARGs)is a hotspot in activated sludge system.However,it is unclear that ho...The effect of combined antibiotics exposure on nitrogen removal,microbial community assembly and proliferation of antibiotics resistance genes(ARGs)is a hotspot in activated sludge system.However,it is unclear that how the historical antibiotic stress affects the subsequent responses of microbes and ARGs to combined antibiotics.In this study,the effects of combined sulfamethoxazole(SMX)and trimethoprim(TMP)pollution on activated sludge under legacy of SMX or TMP stress with different doses(0.005-30 mg/L)were investigated to clarify antibiotic legacy effects.Nitrification activity was inhibited under higher level of combined exposure but a high total nitrogen removal(∼70%)occurred.Based on the full-scale classification,the legacy effect of past antibiotic stress had a marked effect on community composition of conditionally abundant taxa(CAT)and conditionally rare or abundant taxa(CRAT).Rare taxa(RT)were the keystone taxa in the microbial network,and the responses of hub genera were also affected by the legacy of antibiotic stress.Nitrifying bacteria and genes were inhibited by the antibiotics and aerobic denitrifying bacteria(Pseudomonas,Thaurea and Hydrogenophaga)were enriched under legacy of high dose,as were the key denitrifying genes(napA,nirK and norB).Furthermore,the occurrences and co-selection relationship of 94 ARGs were affected by legacy effect.While,some shared hosts(eg.,Citrobacter)and hub ARGs(eg.,mdtD,mdtE and acrD)were identified.Overall,antibiotic legacy could affect responses of activated sludge to combined antibiotic and the legacy effect was stronger at higher exposure levels.展开更多
The global increased antibiotic resistance level in pathogenic microbes has posed a significant threat to human health.Fresh vegetables have been recognized to be an important vehicle of antibiotic resistance genes(AR...The global increased antibiotic resistance level in pathogenic microbes has posed a significant threat to human health.Fresh vegetables have been recognized to be an important vehicle of antibiotic resistance genes(ARGs)from environments to human beings.Phyllosphere ARGs have been indicated to be changed with plant species,yet the influence of plant cultivar on the phyllospheric resistome is still unclear.Here,we detected the ARGs and bacterial communities in the phyllosphere of two cultivars of cilantros and their corresponding soils using high-throughput quantitative PCR technique and bacterial 16S rRNA gene-based high-throughput sequencing,respectively.We further identified the potential bacterial pathogens and analyzed the effects of plant cultivar on ARGs,mobile genetic elements(MGEs),microbiome and potential bacterial pathogens.The results showed that the cultivars did not affect the ARG abundance and composition,but significantly shaped the abundance of MGEs and the composition structure of bacteria in the phyllosphere.The relative abundance of potential bacterial pathogenswas significantly higher in the phyllosphere than that in soils.Mantel test showed that the ARG patterns were significantly correlated to the patterns of potential bacterial pathogens.Our results suggested that the horizontal gene transfer of ARGs in the phyllosphere might be different between the two cultivars of cilantro and highlighted the higher risk of phyllospheric microorganisms compared with those in soils.These findings extend our knowledge on the vegetable microbiomes,ARGs,and potential pathogens,suggesting more agricultural and hygiene protocols are needed to control the risk of foodborne ARGs.展开更多
Food waste(FW)has been recognized as essential reservoir for resource recovery via anaerobic fermentation,which could also bring the potential risk of antibiotic resistance genes(ARGs)dissemination.Although the struct...Food waste(FW)has been recognized as essential reservoir for resource recovery via anaerobic fermentation,which could also bring the potential risk of antibiotic resistance genes(ARGs)dissemination.Although the structural deficiency of FW could be stimulated by enzymatic pretreatment to enhance fermentation efficiency,the influences of enzymatic pretreatment on ARGs fate and microbial metabolic pathways involved in ARGs dissemination have rarely been reported.This work proved that enzymatic pretreatment could effectively decrease the total abundance of ARGs(reduced by 13.8%-24.5%)during long-term FW fermentation.It was found that enzymatic pretreatment significantly reduced the ARGs belonging to the efflux pump,which might be ascribed to its ability to increase membrane permeability.Furthermore,enzymatic pretreatment was in favor of reducing microbial diversity and various potential ARGs host(e.g.,Methanosarcina,Clostridium,Prevotella,Parabacteroides).Also,this pretreatment remarkably up-regulated the genetic expressions involved in ABC transporter(e.g.,eryF and mntA)and down-regulated the genetic expressions that participated in DNA replication,two-component systems(e.g.,uphA and cckA),and quorum sensing(e.g.,rpfF and lsrG),thereby decreasing ARGs transmission.This study would expand the insight of the influences of pretreatment method on ARGs fate during FW fermentation,and offer practical guidance on the sustainable management of FW.展开更多
Trifunctional Cu-mesh/Cu_(2)O@FeO nanoarrays heterostructure is designed and fabricated by integrating CuCu_(2)O@FeO nanoarrays onto Cu-mesh(CM)via an in situ growth and phase transformation process.It is successfully...Trifunctional Cu-mesh/Cu_(2)O@FeO nanoarrays heterostructure is designed and fabricated by integrating CuCu_(2)O@FeO nanoarrays onto Cu-mesh(CM)via an in situ growth and phase transformation process.It is successfully applied to efficiently mitigate the antibiotic pollution,including degradation of antibiotics,inactivation of antibiotic-resistant bacteria(ARB),and damage of antibiotics resistance genes(ARGs).Under visible-light irradiation,CM/CuCu_(2)O@FeO nanoarrays exhibit a superior degradation efficiency on antibiotics(e.g.,up to 99%in 25 min for tetracycline hydrochloride,TC),due to the generated reactive oxygen species(ROS),especially the dominant·O^(2−).It can fully inactivate E.coli(HB101)with initial number of~108 CFU mL^(−1) in 10 min,which is mainly attributed to the synergistic effects of 1D nanostructure,dissolved metal ions,and generated ROS.Meanwhile,it is able to damage ARGs after 180 min of photodegradation,including tetA(vs TC)of 3.3 log 10,aphA(vs kanamycin sulfate,KAN)of 3.4 log 10,and tnpA(vs ampicillin,AMP)of 4.4 log 10,respectively.This work explores a green way for treating antibiotic pollution under visible light.展开更多
Solid-phase denitrification(SPD)has been used in wastewater treatment plant effluent to enhance nitrate removal,and antibiotics co-existing in the effluent is a common environmental problem.In this study,it was system...Solid-phase denitrification(SPD)has been used in wastewater treatment plant effluent to enhance nitrate removal,and antibiotics co-existing in the effluent is a common environmental problem.In this study,it was systematically investigated the effect of single trace sulfamethoxazole(SMX)/trimethoprim(TMP)and theirmixture on microbial denitrification performance,the antibiotics removal,and antibiotics resistance genes(ARGs)in corncob supported SPD system.The average denitrification rate was improved by 46.90%or 61.09%with single 50μg/L SMX or TMP,while there was no significant inhibition with mixed SMX and TMP.The abundance of dominant denitrifiers(Comamonadaceae family and Azospia)and fermentation bacteria(Ancalomicrobium)were consistent with the denitrification performance of different antibiotics groups.Single SMX and TMP achieved relatively higher denitrification gene and enzyme abundance.Mixed SMX and TMP improved the denitrification gene copies,but they reduced the key denitrification enzymes except for EC 1.7.7.2.Additionally,the removal efficiency of TMP(56.70%±3.18%)was higher than that of SMX(25.44%±2.62%)in single antibiotic group,and the existence of other antibiotics(i.e.SMX or TMP)had no significant impact on the TMP or SMX removal performance.Biodegradation was the main removal mechanism of SMX and TMP,while sludge and corncob adsorption contributed a little to their removal.SMX had the risk of sulfanilamide resistance genes(SRGs)dissemination.Furthermore,network analysis indicated that Niveibacterium and Bradyrhizobium were the potential hosts of SRGs,which promoted the horizontal transmission of ARGs.展开更多
Phyllosphere is an important reservoir of antibiotic resistance genes(ARGs),but the transfer mechanism of ARGs from soil and air to phyllosphere remains unclear.This study demonstrated that soil-air-phyllosphere was t...Phyllosphere is an important reservoir of antibiotic resistance genes(ARGs),but the transfer mechanism of ARGs from soil and air to phyllosphere remains unclear.This study demonstrated that soil-air-phyllosphere was the dominant ARG transfer pathway,and blocking it by film mulching can reduce typical phyllosphere ARGs in lettuce by 80.7%-98.7%(89.5%on average).To further eliminate phyllosphere ARGs in lettuce grown with film mulching,the internal soil-endosphere-phyllosphere transfer pathway deserves more attention.We analyzed the ARG hosts and the resistome in lettuce rhizosphere and phyllosphere with film mulching via hybrid Illumina-Nanopore sequencing.Pseudomonas sp.7SR1 was more abundant than other ARG hosts,accounting for 1.0%and 47.1%of the total bacteria in rhizosphere and phyllosphere,respectively.The species has flagella that can promote mobility and can excrete extracellular polymeric substances and/or surfactant-like microbial products,which benefits its colonization in the phyllosphere.Impeding the migration of Pseudomonas sp.7SR1 via the soil-endosphere-phyllosphere pathway would be effective to further reduce ARGs in phyllosphere.Multidrug resistant genes were predominant in phyllosphere(40.3%of the total),and 87.6%of the phyllosphere ARGs were located on chromosomes,indicating relatively low horizontal gene transfer(HGT)potentials.This study provides insights into the transfer mechanism,hosts,and control strategies of phyllosphere ARGs in typical plants.展开更多
This study aimed to reveal how amoxicillin(AMX) affected the microbial community and the spread mechanism of antibiotic resistance genes(ARGs) in the AMX manufacture wastewater treatment system. For this purpose, a 1....This study aimed to reveal how amoxicillin(AMX) affected the microbial community and the spread mechanism of antibiotic resistance genes(ARGs) in the AMX manufacture wastewater treatment system. For this purpose, a 1.47 L expanded granular sludge bed(EGSB) reactor was designed and run for 241 days treating artificial AMX manufacture wastewater. 454 pyrosequencing was applied to analyze functional microorganisms in the system. The antibiotic genes OXA_(-1), OXA_(-2), OXA_(-10), TEM_(-1), CTX-M_(-1), class I integrons(intI1) and 16 SrRNA genes were also examined in sludge samples. The results showed that the genera Ignavibacterium, Phocoenobacter,Spirochaeta, Aminobacterium and Cloacibacillus contributed to the degradation of different organic compounds(such as various sugars and amines). And the relative quantification of eachβ-lactam resistance gene in the study was changed with the increasing of AMX concentration.Furthermore the vertical gene transfer was the main driver for the spread of ARGs rather than horizontal transfer pathways in the system.展开更多
Elimination of antibiotic resistance genes(ARGs)in animal manure from concentrated animal feeding operations by thermophilic composting has drawn increasing attention.This study investigated the effects of sawdust bio...Elimination of antibiotic resistance genes(ARGs)in animal manure from concentrated animal feeding operations by thermophilic composting has drawn increasing attention.This study investigated the effects of sawdust biochar,corn stover biochar and peanut hull biochar with three spiked levels on ARGs in swine manure during thermophilic composting.Thirteen ARGs corresponding to four classes of antibiotics(tetracyclines,sulfonamides,macrolides and quinolones)were determined in the composting piles.Results indicated that the ten tested composting groups became fully mature after 30-day thermophilic composting process.tetM,tetO and ermB were reduced in all tested groups;tetC and tetG,tetX,sul1,sul2,ermF,qnrD and aac(6’)-Ib were mostly reduced under low level biochar addition but increased under higher level biochar addition;gyrA increased under medium biochar addition and reduced in other groups;oqxB remained comparatively stable throughout the composting process.The addition levels of spiked biochar are more important than types of spiked biochar on the removal of ARGs in the composting pile.The average removal rates of ARGs in the control group,low,medium and high level biochar addition groups were 0.24 logs,0.52-0.72 logs,-0.52-0.18 logs and-0.19-0.21 logs,respectively.In summary,low level biochar addition could enhance the elimination of studied ARGs in swine manure during the composting process,while medium level biochar addition to the composting piles would increase the risk of ARGs’propagation.展开更多
The large-scale development in livestock feed industry has increased the chances of antibiotics and heavy metals contamination in the soil.The fate of antibiotic resistance genes(ARGs)and microbial community in heavy ...The large-scale development in livestock feed industry has increased the chances of antibiotics and heavy metals contamination in the soil.The fate of antibiotic resistance genes(ARGs)and microbial community in heavy metals and antibiotic contaminated soil is still unclear.In this study,we investigated the effect of cadmium(Cd)addition on the transport of ARGs,microbial community and human pathogenic bacteria in oxytetracycline(OTC)contaminated soil.Results showed that the addition of OTC significantly increased the abundance of ARGs and intI1 in the soil and lettuce tissues.The addition of Cd to OTC treated soil further increased the abundance and translocation of ARGs and intI1.Moreover,Cd promoted the transfer of potential human pathogenic bacteria(HPB)into lettuce tissues.Compared with O10 treatment,the addition of Cd decreased the concentration of OTC in soil and lettuce tissue,but slightly increased the fresh weight of lettuce tissues.Redundancy analysis indicated that bacterial community succession is a major factor in ARGs variation.Network analysis indicated that the main host bacteria of ARGs were mainly derived from Proteobacteria.Correlation analysis showed that intI1 was significantly correlated with tetG,tetC,sul1,sul2,erm X,and ermQ.Meanwhile,potential HPB(Clostridium,and Burkholderia)was significantly correlated with intI1 and eight ARGs(tetG,tetC,tetW,tetX,sul1,sul2,ermX,and ermQ.).The findings of this study suggest that the addition of heavy metals to agricultural fields must be considered in order to reduce the transfer of ARGs in the soil and crops.展开更多
Antibiotic resistance genes(ARGs) as emergence contaminations have spread widely in the water environment. Wild fish may be recipients and communicators of ARGs in the water environment, however, the distribution and ...Antibiotic resistance genes(ARGs) as emergence contaminations have spread widely in the water environment. Wild fish may be recipients and communicators of ARGs in the water environment, however, the distribution and transmission of ARGs in the wild fish and relevant water environment were rarely reported. Here, we have profiled ARGs and bacterial communities in wild freshwater fish and relevant water in a peri-urban river using highthroughput qPCR and 16 S rRNA gene sequence. A total of 80 and 220 unique ARG subtypes were identified in fish and water samples. Fish and water both showed significant ARG seasonal variations( P < 0.05). The highest absolute abundance of ARGs in fish and water occurred in summer(1.32 × 10^(9) copies per g, on average) and autumn(9.04 × 10^(6) copies per mL), respectively. In addition, the bipartite network analysis showed that 9 ARGs and 1 mobile genetic element continuously shared in fish and water. Furthermore, bacteria shared in fish and water were found to significantly correlate with shard ARGs. The findings demonstrate that bacteria and ARGs in fish and water could interconnect and ARGs might transfer between fish and water using bacteria as a spreading medium.展开更多
基金supported by the National Natural Science Foundation of China(32172188)Science and Technology Cooperation Project of ZheJiang Province(2023SNJF058-3)。
文摘Multidrug-resistant(MDR)Enterobacteriaceae critically threaten duck farming and public health.The phenotypes,genotypes,and associated mobile genetic elements(MGEs)of MDR Enterobacteriaceae isolated from 6 duck farms in Zhejiang Province,China,were investigated.A total of 215 isolates were identified as Escherichia coli(64.65%),Klebsiella pneumoniae(12.09%),Proteus mirabilis(10.23%),Salmonella(8.84%),and Enterobacter cloacae(4.19%).Meanwhile,all isolates were resistant to at least two antibiotics.Most isolates carried tet(A)(85.12%),blaTEM(78.60%)and sul1(67.44%)resistance genes.Gene co-occurrence analysis showed that the resistance genes were associated with IS26 and integrons.A conjugative IncFII plasmid pSDM004 containing all the above MGEs was detected in Proteus mirabilis isolate SDM004.This isolate was resistant to 18 antibiotics and carried the blaNDM-5 gene.MGEs,especially plasmids,are the primary antibiotic resistance gene transmission route in duck farms.These findings provide a theoretical basis for the rational use of antibiotics in farms which are substantial for evaluating public health and food safety.
基金supported by the Science and Technology Innovation Special Fund Project of Fujian Agriculture and Forestry University (No.CXZX2020073A)Project of Fujian Provincial Department of Science and Technology,China (No.2022N5007)。
文摘This study explored the combined effects of Bacillus subtilis inoculation with biochar on the evolution of bacterial communities,antibiotic resistance genes(ARGs),and mobile genetic elements(MGEs)during the composting of chicken manure.The results showed that B.subtilis inoculation combined with biochar increased bacterial abundance and diversity as well as prolonged the compost thermophilic period.Promoted organic matter biodegradation and facilitated the organic waste compost humification process,reduced the proliferation of ARGs by altering the bacterial composition.Firmicutes and Actinobacteriota were the main resistant bacteria related to ARGs and MGEs.The decrease in ARGs and MGEs was associated with the reduction in the abundance of related host bacteria.Compost inoculation with B.subtilis and the addition of biochar could promote nutrient transformation,reduce the increase in ARGs and MGEs,and increase the abundance of beneficial soil taxa.
文摘The accessibility of tetracycline resistance gene (tetG) into the pores of activated carbon (AC), as well as the impact of the pore size distribution (PSD) of AC on the uptake capacity of tetG, were investigated using eight types of AC (four coal-based and four wood-based). AC showed the capability to admit tetG and the average reduction of tetG for coal-based and wood-based ACs at the AC dose of 1 g·L<sup>-1</sup> was 3.12 log and 3.65 log, respectively. The uptake kinetic analysis showed that the uptake of the gene followed the pseudo-second-order kinetics reaction, and the uptake rate constant for the coal-based and wood-based ACs was in the range of 5.97 × 10<sup>-12</sup> - 4.64 × 10<sup>-9</sup> and 7.02 × 10<sup>-11</sup> - 1.59 × 10<sup>-8</sup> copies·mg<sup>-1</sup>·min<sup>-1</sup>, respectively. The uptake capacity analysis by fitting the obtained experiment data with the Freundlich isotherm model indicated that the uptake constant (K<sub>F</sub>) values were 1.71 × 10<sup>3</sup> - 8.00 × 10<sup>9</sup> (copies·g<sup>-1</sup>)<sup>1-1/n</sup> for coal-based ACs and 7.00 × 10<sup>8</sup> - 3.00 × 10<sup>10</sup> (copies·g<sup>-1</sup>)<sup>1-1/n</sup> for wood-based ones. In addition, the correlation analysis between K<sub>F</sub> values and pore volume as well as pore surface at different pore size regions of ACs showed that relatively higher positive correlation was found for pores of 50 - 100 Å, suggesting ACs with more pores in this size region can uptake more tetG. The findings of this study are valuable as reference for optimizing the adsorption process regarding antibiotic resistance-related concerns in drinking water treatment.
基金This work was supported by the Chinese Major Science and Technology Program for Water Pollution Control and Treatment(No.2017ZX07207002-03)the Science and Technology Commission of Shanghai Municipality(Nos.19050501900 and 19DZ1204504)EJ was supported by TüBITAK program BIDEB2232(No.118C250).We would also like to express our deep thanks to Anne Mette Poulsen from Aarhus University for her English assistance.
文摘Comprehensive studies of the effects of various physical and chemical variables(including heavymetals),antibiotics,and microorganisms in the environment on antibiotic resistance genes are rare.We collected sediment samples from the Shatian Lake aquaculture area and surrounding lakes and rivers located in Shanghai,China.The spatial distribution of sediment ARGs was assessed by metagenomic analysis that revealed 26 ARG types(510 subtypes),dominated by Multidrug,β-lactam,Aminoglycoside,Glycopeptides,Fluoroquinolone,and Tetracyline.Redundancy discriminant analysis indicated that antibiotics(SAs and MLs)in the aqueous environment and sediment along with water TN and TP were the key variables affecting the abundance distribution of total ARGs.However,the main environmental drivers and key influences differed among the different ARGs.For total ARGs,the environmental subtypes affecting their structural composition and distribution characteristics were mainly antibiotic residues.Procrustes analysis showed a significant correlation between ARGs and microbial communities in the sediment in the survey area.Network analysis revealed that most of the target ARGs were significantly and positively correlated with microorganisms,and a small number of ARGs(e.g.,rpoB,mdtC,and efpA)were highly significantly and positively correlated with microorganisms(e.g.,Knoellia,Tetrasphaera,and Gem-matirosa).Potential hosts for the major ARGs included Actinobacteria,Proteobacteria,and Gemmatimonadetes.Our study provides new insight and a comprehensive assessment of the distribution and abundance of ARGs and the drivers of ARG occurrence and transmission.
基金supported by the National Natural Science Foundation of China(No.41671320)the Natural Science Foundation of Shandong Province,China(No.ZR2016JL029)and the Special Funds of Taishan Scholar of Shandong Province,China.
文摘As a new type of environmental pollutant,antibiotic resistance genes(ARGs)pose a huge challenge to global health.Horizontal gene transfer(HGT)represents an important route for the spread of ARGs.The widespread use of sulfamethazine(SM2)as a broad-spectrum bacteriostatic agent leads to high residual levels in the environment,thereby increasing the spread of ARGs.Therefore,we chose to study the effect of SM2 on the HGT of ARGs mediated by plasmid RP4 from Escherichia coli(E.coli)HB101 to E.coli NK5449 as well as its mechanism of action.The results showed that compared with the control group,SM2 at concentrations of 10 mg/L and 200 mg/L promoted the HGT of ARGs,but transfer frequency decreased at concentrations of 100 mg/L and 500 mg/L.The transfer frequency at 200 mg/L was 3.04×10^(−5),which was 1.34-fold of the control group.The mechanism of SM2 improving conjugation transfer is via enhancement of the mRNA expression of conjugation genes(trbBP,trfAP)and oxidative stress genes,inhibition of the mRNA expression of vertical transfer genes,up regulation of the outer membrane protein genes(ompC,ompA),promotion of the formation of cell pores,and improvement of the permeability of cell membrane to promote the conjugation transfer of plasmid RP4.The results of this study provide theoretical support for studying the spread of ARGs in the environment.
基金the National Natural Science Foundation of China(42101128,51578537,and 51778603)Chinese Academy of Sciences(QYZDY-SSW-DQC004).
文摘Wastewater treatment plants(WWTPs)with additional tertiary ultrafiltration membranes and ozonation treatment can improve water quality in receiving rivers.However,the impacts of WWTP upgrade(WWTP-UP)on pathogens carrying antibiotic resistance genes(ARGs)and virulence factors(VFs)in rivers remain poorly understood.In this study,ARGs,VFs,and their pathogenic hosts were investigated in three rivers impacted by large-scale WWTP-UP.A five-year sampling campaign covered the periods before and after WWTP-UP.Results showed that the abundance of total metagenome-assembled genomes(MAGs)containing both ARGs and VFs in receiving rivers did not decrease substantially after WWTP-UP,but the abundance of MAGs belonging to pathogenic genera that contain both ARGs and VFs(abbreviated as PAVs)declined markedly.'Genome-resolved metagenomics further revealed that WWTP-UP not only reduced most types of VFs and ARGs in PAVs,but also effectively eliminated efflux pump and nutritional VFs carried by PAVs in receiving rivers.WWTP-UP narrowed the pathogenic host ranges of ARGs and VFs and mitigated the cooccurrence of ARGs and VFs in receiving rivers.These findings underline the importance of WWTPUP for the alleviation of pathogens containing both ARGs and VFs in receiving rivers。
基金Fundação de Amparo a Pesquisa do Estado de São Paulo(FAPESP)and the Conselho Nacional de Desenvolvimento Científico e Tecnológico(CNPq),São Paulo,Brazil for PhD scholarship(Process N°.141086/2015-7)financial support(Process No.870243/1997-7).
文摘The UV irradiation is used for removing Antibiotic Resistant Bacteria(ARB)and Antibiotic Resistance Genes(ARG)from wastewater treatment.Bacteriophages are viruses that infect within bacteria,are recognized for bacterial control.The influence of some parameters in quantification and performance influencing of pathogen demobilization could be considered in disinfection of wastewater.The comparison of Polyvalent phage(NE1)versus Coliphage(NE4)in suppressing a bacterium Escherichia coli(NDM-1:b-lactam-resistant)with UV irradiation was observed the efficacy in reduction of cells in the disinfection and parameter process.The results with the effect of UV-C irradiation on NDM-1 infected with 1%of NE4 showed a decrease of cells from 8×10^(6)to 2×10^(5)in 60 min with UV-C dose.The NDM1(E.coli)was infected with 1%of NE4(Polyvalent Phage)under magnetic stirring for 1 h,the cells count was 8×10^(6).After 1 h in UV-C e×posure,the cells number reached 3×10^(5).The NDM1 that was e×posed in 1 h of UV-C irradiation and then was infected with 1%of NE4.Cells counting were done 24 h after this procedure.These cells were e×posed in UV-C and showed a reduction in the number of cells from 1×10^(8)to 4×10^(5)after 60 min.The results indicate that bacteriophages can mitigate bacteria species,and combined the conventional water disinfection technologies that can support the microbial safety control strategies.
基金This study was supported by the National Natural Science Foundation of China(No.42177348)the Natural Science Foundation of Jiangsu Province(No.BK20201367)China Postdoctoral Science Foundation(No.2021M701663).
文摘Despite coastal mudflats serving as essential ecological zones interconnecting terrestrial/freshwater and marine systems,little is known about the profiles of antibiotic resistance genes(ARGs)in this area.In this study,characteristics of typical ARGs,involving both intracellular(iARGs)and extracellular ARGs(eARGs)at different physical states,were explored in over 1000 km of coastal mudflats in Eastern China.Results indicated the presence of iARGs and eARGs at states of both freely present or attached by particles.The abundance of eARGs was significantly higher than that of iARGs(87.3%vs 12.7%),and their dominance was more significant than those in other habitats(52.7%-76.3%).ARG abundance,especially for eARGs,showed an increasing trend(p<0.05)from southern(Nantong)to northern(Lianyungang)coastalmudflats.Higher salinity facilitated the transformation from iARGs to eARGs,and smaller soil particle size was conducive to the persistence of eARGs in northern coastal mudflats.This study addresses the neglected function of coastal mudflats as eARGs reservoirs.
基金The research was supported by the Hainan Provincial Joint Project of Sanya Yazhou Bay Science and Technology City(No.2021CXLH0009)the National Natural Science Foundation of China(Nos.41976222 and 42006195)+4 种基金the Scientific Research Foundation of Hainan Tropical Ocean University(No.RHDRC202201)the Science and Technology Project of Yazhou Bay Innovation Institute of Hainan Tropical Ocean University(No.2022CXYZD002)the National Key Research and Development Program of China(No.2019YFD0901104)the Open Fund for the Key Laboratory of Global Change and Marine-Atmospheric Chemistry(No.GCMAC 2010)the Open Fund of State Key Laboratory of Environmental Chemistry and Ecotoxicology(No.KF2018-05).
文摘Coastal lagoons provide many important services to human society,but their year-round use for aquaculture introduces large amounts of sewage.The contamination of antibiotic resistance genes(ARGs)is therefore of great concern.In this study,50 ARGs subtypes,two integrase genes(intl1,intl2),and 16S rRNA genes were detected by high-throughput quantitative PCR,and standard curves of all target genes were prepared for quantification.The occurrence and distribution of ARGs in a typical coastal lagoon(XinCun lagoon,China)were comprehensively explored.We detected 44 and 38 subtypes of ARGs in the water and sediment,respectively,and discuss the various factors influencing the fate of ARGs in the coastal lagoon.Macrolides-lincosamides-streptogramins B was the primary ARG type,and macB was the predominant subtype.Antibiotic efflux and antibiotic inactivation were the main ARG resistance mechanisms.The XinCun lagoon was divided into eight functional zones.The ARGs showed a distinct spatial distribution owing to the influence of microbial biomass and anthropogenic activity in different functional zones.Fishing rafts,abandoned fish ponds,the town sewage zone,and mangrove wetlands provided a large quantity of ARGs to the XinCun lagoon.Nutrients and heavy metals also significantly correlated with the fate of the ARGs,especially NO_(2)^(−)-N and Cu,which cannot be ignored.It is noteworthy that lagoon-barrier systems coupled with persistent pollutant inputs result in coastal lagoons acting as a“buffer pool”for ARGs,which can then accumulate and threaten the offshore environment.
基金supported by the National Natural Science Foundation of China(No.51878333)the Natural Science Foundation of Jiangsu Province(No.BK20201260).
文摘The occurrence of antibiotic resistance genes(ARGs)in various environments has drawn worldwide attention due to their potential risks.Previous studies have reported that a variety of substances can enhance the occurrence and dissemination of ARGs.However,few studies have compared the response of ARGs under the stress of different organicmatters in biologicalwastewater treatment systems.In this study,seven organic pollutantswere added into wastewater treatment bioreactors to investigate their impacts on the ARG occurrence in activated sludge.Based on high-throughput sequencing,it was found that the microbial communities and ARG patterns were significantly changed in the activated sludge exposed to these organic pollutants.Compared with the non-antibiotic refractory organic matters,antibiotics not only increased the abundance of ARGs but also significantly changed the ARG compositions.The increase of Gram-negative bacteria(e.g.,Archangium,Prosthecobacter and Dokdonella)carrying ARGs could be the main cause of ARG proliferation.In addition,significant co-occurrence relationships between ARGs and mobile genetic elements were also observed in the sludge samples,which may also affect the ARG diversity and abundance during the organic matter treatment in the bioreactors.Overall,these findings provide new information for better understanding the ARG occurrence and dissemination caused by organic pollutants in wastewater treatment systems.
基金supported by the National Natural Science Foundation of China(No.51808013)Connotation Development Quota Project of High-top Talent of BJUT(No.YS20-1006757-056).
文摘The effect of combined antibiotics exposure on nitrogen removal,microbial community assembly and proliferation of antibiotics resistance genes(ARGs)is a hotspot in activated sludge system.However,it is unclear that how the historical antibiotic stress affects the subsequent responses of microbes and ARGs to combined antibiotics.In this study,the effects of combined sulfamethoxazole(SMX)and trimethoprim(TMP)pollution on activated sludge under legacy of SMX or TMP stress with different doses(0.005-30 mg/L)were investigated to clarify antibiotic legacy effects.Nitrification activity was inhibited under higher level of combined exposure but a high total nitrogen removal(∼70%)occurred.Based on the full-scale classification,the legacy effect of past antibiotic stress had a marked effect on community composition of conditionally abundant taxa(CAT)and conditionally rare or abundant taxa(CRAT).Rare taxa(RT)were the keystone taxa in the microbial network,and the responses of hub genera were also affected by the legacy of antibiotic stress.Nitrifying bacteria and genes were inhibited by the antibiotics and aerobic denitrifying bacteria(Pseudomonas,Thaurea and Hydrogenophaga)were enriched under legacy of high dose,as were the key denitrifying genes(napA,nirK and norB).Furthermore,the occurrences and co-selection relationship of 94 ARGs were affected by legacy effect.While,some shared hosts(eg.,Citrobacter)and hub ARGs(eg.,mdtD,mdtE and acrD)were identified.Overall,antibiotic legacy could affect responses of activated sludge to combined antibiotic and the legacy effect was stronger at higher exposure levels.
基金supported by the National Key Research and Development Plan from Ministry of Science and Technology of the People’s Republic of China(No.2020YFC1806902)the Alliance of International Science Organizations(No.ANSO-PA-2020-18).
文摘The global increased antibiotic resistance level in pathogenic microbes has posed a significant threat to human health.Fresh vegetables have been recognized to be an important vehicle of antibiotic resistance genes(ARGs)from environments to human beings.Phyllosphere ARGs have been indicated to be changed with plant species,yet the influence of plant cultivar on the phyllospheric resistome is still unclear.Here,we detected the ARGs and bacterial communities in the phyllosphere of two cultivars of cilantros and their corresponding soils using high-throughput quantitative PCR technique and bacterial 16S rRNA gene-based high-throughput sequencing,respectively.We further identified the potential bacterial pathogens and analyzed the effects of plant cultivar on ARGs,mobile genetic elements(MGEs),microbiome and potential bacterial pathogens.The results showed that the cultivars did not affect the ARG abundance and composition,but significantly shaped the abundance of MGEs and the composition structure of bacteria in the phyllosphere.The relative abundance of potential bacterial pathogenswas significantly higher in the phyllosphere than that in soils.Mantel test showed that the ARG patterns were significantly correlated to the patterns of potential bacterial pathogens.Our results suggested that the horizontal gene transfer of ARGs in the phyllosphere might be different between the two cultivars of cilantro and highlighted the higher risk of phyllospheric microorganisms compared with those in soils.These findings extend our knowledge on the vegetable microbiomes,ARGs,and potential pathogens,suggesting more agricultural and hygiene protocols are needed to control the risk of foodborne ARGs.
基金This work was financially supported by the National Key Research and Development Program of China(No.2019YFC1906302)the Shanghai Natural Science Foundation(No.22ZR1466900)the China Postdoctoral Science Foundation(No.2021M692423).
文摘Food waste(FW)has been recognized as essential reservoir for resource recovery via anaerobic fermentation,which could also bring the potential risk of antibiotic resistance genes(ARGs)dissemination.Although the structural deficiency of FW could be stimulated by enzymatic pretreatment to enhance fermentation efficiency,the influences of enzymatic pretreatment on ARGs fate and microbial metabolic pathways involved in ARGs dissemination have rarely been reported.This work proved that enzymatic pretreatment could effectively decrease the total abundance of ARGs(reduced by 13.8%-24.5%)during long-term FW fermentation.It was found that enzymatic pretreatment significantly reduced the ARGs belonging to the efflux pump,which might be ascribed to its ability to increase membrane permeability.Furthermore,enzymatic pretreatment was in favor of reducing microbial diversity and various potential ARGs host(e.g.,Methanosarcina,Clostridium,Prevotella,Parabacteroides).Also,this pretreatment remarkably up-regulated the genetic expressions involved in ABC transporter(e.g.,eryF and mntA)and down-regulated the genetic expressions that participated in DNA replication,two-component systems(e.g.,uphA and cckA),and quorum sensing(e.g.,rpfF and lsrG),thereby decreasing ARGs transmission.This study would expand the insight of the influences of pretreatment method on ARGs fate during FW fermentation,and offer practical guidance on the sustainable management of FW.
基金This work was financially sup-ported by the National Natural Science Foundation of China(NSFC Nos:22171212,21771140,51771138,51979194)International Corporation Project of Shanghai Committee of Science and Technology by China(No.21160710300)International Exchange Grant(IEC/NSFC/201078)through Royal Society UK and NSFC.
文摘Trifunctional Cu-mesh/Cu_(2)O@FeO nanoarrays heterostructure is designed and fabricated by integrating CuCu_(2)O@FeO nanoarrays onto Cu-mesh(CM)via an in situ growth and phase transformation process.It is successfully applied to efficiently mitigate the antibiotic pollution,including degradation of antibiotics,inactivation of antibiotic-resistant bacteria(ARB),and damage of antibiotics resistance genes(ARGs).Under visible-light irradiation,CM/CuCu_(2)O@FeO nanoarrays exhibit a superior degradation efficiency on antibiotics(e.g.,up to 99%in 25 min for tetracycline hydrochloride,TC),due to the generated reactive oxygen species(ROS),especially the dominant·O^(2−).It can fully inactivate E.coli(HB101)with initial number of~108 CFU mL^(−1) in 10 min,which is mainly attributed to the synergistic effects of 1D nanostructure,dissolved metal ions,and generated ROS.Meanwhile,it is able to damage ARGs after 180 min of photodegradation,including tetA(vs TC)of 3.3 log 10,aphA(vs kanamycin sulfate,KAN)of 3.4 log 10,and tnpA(vs ampicillin,AMP)of 4.4 log 10,respectively.This work explores a green way for treating antibiotic pollution under visible light.
基金supported by the Special Funds for the Balance of the Central Financial and Technology Plan(No.2021-JY-33)National Basic Research Program of China(No.2019YFC0408602).
文摘Solid-phase denitrification(SPD)has been used in wastewater treatment plant effluent to enhance nitrate removal,and antibiotics co-existing in the effluent is a common environmental problem.In this study,it was systematically investigated the effect of single trace sulfamethoxazole(SMX)/trimethoprim(TMP)and theirmixture on microbial denitrification performance,the antibiotics removal,and antibiotics resistance genes(ARGs)in corncob supported SPD system.The average denitrification rate was improved by 46.90%or 61.09%with single 50μg/L SMX or TMP,while there was no significant inhibition with mixed SMX and TMP.The abundance of dominant denitrifiers(Comamonadaceae family and Azospia)and fermentation bacteria(Ancalomicrobium)were consistent with the denitrification performance of different antibiotics groups.Single SMX and TMP achieved relatively higher denitrification gene and enzyme abundance.Mixed SMX and TMP improved the denitrification gene copies,but they reduced the key denitrification enzymes except for EC 1.7.7.2.Additionally,the removal efficiency of TMP(56.70%±3.18%)was higher than that of SMX(25.44%±2.62%)in single antibiotic group,and the existence of other antibiotics(i.e.SMX or TMP)had no significant impact on the TMP or SMX removal performance.Biodegradation was the main removal mechanism of SMX and TMP,while sludge and corncob adsorption contributed a little to their removal.SMX had the risk of sulfanilamide resistance genes(SRGs)dissemination.Furthermore,network analysis indicated that Niveibacterium and Bradyrhizobium were the potential hosts of SRGs,which promoted the horizontal transmission of ARGs.
基金supported by the National Natural Science Foundation of China(Nos.21836003 and 21621005)the National Key Research and Development Program of China(No.2020YFC1806903)。
文摘Phyllosphere is an important reservoir of antibiotic resistance genes(ARGs),but the transfer mechanism of ARGs from soil and air to phyllosphere remains unclear.This study demonstrated that soil-air-phyllosphere was the dominant ARG transfer pathway,and blocking it by film mulching can reduce typical phyllosphere ARGs in lettuce by 80.7%-98.7%(89.5%on average).To further eliminate phyllosphere ARGs in lettuce grown with film mulching,the internal soil-endosphere-phyllosphere transfer pathway deserves more attention.We analyzed the ARG hosts and the resistome in lettuce rhizosphere and phyllosphere with film mulching via hybrid Illumina-Nanopore sequencing.Pseudomonas sp.7SR1 was more abundant than other ARG hosts,accounting for 1.0%and 47.1%of the total bacteria in rhizosphere and phyllosphere,respectively.The species has flagella that can promote mobility and can excrete extracellular polymeric substances and/or surfactant-like microbial products,which benefits its colonization in the phyllosphere.Impeding the migration of Pseudomonas sp.7SR1 via the soil-endosphere-phyllosphere pathway would be effective to further reduce ARGs in phyllosphere.Multidrug resistant genes were predominant in phyllosphere(40.3%of the total),and 87.6%of the phyllosphere ARGs were located on chromosomes,indicating relatively low horizontal gene transfer(HGT)potentials.This study provides insights into the transfer mechanism,hosts,and control strategies of phyllosphere ARGs in typical plants.
基金supported by the National Natural Science Foundation of China (No.51478138)the State Key Lab of Urban Water Resource and Environment (No.HIT ES200902)
文摘This study aimed to reveal how amoxicillin(AMX) affected the microbial community and the spread mechanism of antibiotic resistance genes(ARGs) in the AMX manufacture wastewater treatment system. For this purpose, a 1.47 L expanded granular sludge bed(EGSB) reactor was designed and run for 241 days treating artificial AMX manufacture wastewater. 454 pyrosequencing was applied to analyze functional microorganisms in the system. The antibiotic genes OXA_(-1), OXA_(-2), OXA_(-10), TEM_(-1), CTX-M_(-1), class I integrons(intI1) and 16 SrRNA genes were also examined in sludge samples. The results showed that the genera Ignavibacterium, Phocoenobacter,Spirochaeta, Aminobacterium and Cloacibacillus contributed to the degradation of different organic compounds(such as various sugars and amines). And the relative quantification of eachβ-lactam resistance gene in the study was changed with the increasing of AMX concentration.Furthermore the vertical gene transfer was the main driver for the spread of ARGs rather than horizontal transfer pathways in the system.
基金The project was financially supported by the National Key R&D Program of China(2017YFD0800800).
文摘Elimination of antibiotic resistance genes(ARGs)in animal manure from concentrated animal feeding operations by thermophilic composting has drawn increasing attention.This study investigated the effects of sawdust biochar,corn stover biochar and peanut hull biochar with three spiked levels on ARGs in swine manure during thermophilic composting.Thirteen ARGs corresponding to four classes of antibiotics(tetracyclines,sulfonamides,macrolides and quinolones)were determined in the composting piles.Results indicated that the ten tested composting groups became fully mature after 30-day thermophilic composting process.tetM,tetO and ermB were reduced in all tested groups;tetC and tetG,tetX,sul1,sul2,ermF,qnrD and aac(6’)-Ib were mostly reduced under low level biochar addition but increased under higher level biochar addition;gyrA increased under medium biochar addition and reduced in other groups;oqxB remained comparatively stable throughout the composting process.The addition levels of spiked biochar are more important than types of spiked biochar on the removal of ARGs in the composting pile.The average removal rates of ARGs in the control group,low,medium and high level biochar addition groups were 0.24 logs,0.52-0.72 logs,-0.52-0.18 logs and-0.19-0.21 logs,respectively.In summary,low level biochar addition could enhance the elimination of studied ARGs in swine manure during the composting process,while medium level biochar addition to the composting piles would increase the risk of ARGs’propagation.
基金the Ministry of Science and Technology of China(No.2017YFD0200200)the Science and Technology Co-ordination Innovation Project of Shaanxi Province(No.2016KTZDNY03-01)the Water Science and Technology Project of Shaanxi Province(No.2016slkj-15)。
文摘The large-scale development in livestock feed industry has increased the chances of antibiotics and heavy metals contamination in the soil.The fate of antibiotic resistance genes(ARGs)and microbial community in heavy metals and antibiotic contaminated soil is still unclear.In this study,we investigated the effect of cadmium(Cd)addition on the transport of ARGs,microbial community and human pathogenic bacteria in oxytetracycline(OTC)contaminated soil.Results showed that the addition of OTC significantly increased the abundance of ARGs and intI1 in the soil and lettuce tissues.The addition of Cd to OTC treated soil further increased the abundance and translocation of ARGs and intI1.Moreover,Cd promoted the transfer of potential human pathogenic bacteria(HPB)into lettuce tissues.Compared with O10 treatment,the addition of Cd decreased the concentration of OTC in soil and lettuce tissue,but slightly increased the fresh weight of lettuce tissues.Redundancy analysis indicated that bacterial community succession is a major factor in ARGs variation.Network analysis indicated that the main host bacteria of ARGs were mainly derived from Proteobacteria.Correlation analysis showed that intI1 was significantly correlated with tetG,tetC,sul1,sul2,erm X,and ermQ.Meanwhile,potential HPB(Clostridium,and Burkholderia)was significantly correlated with intI1 and eight ARGs(tetG,tetC,tetW,tetX,sul1,sul2,ermX,and ermQ.).The findings of this study suggest that the addition of heavy metals to agricultural fields must be considered in order to reduce the transfer of ARGs in the soil and crops.
基金supported by the Natural Science Foundation of China (Nos. 21876147 and 21677121)。
文摘Antibiotic resistance genes(ARGs) as emergence contaminations have spread widely in the water environment. Wild fish may be recipients and communicators of ARGs in the water environment, however, the distribution and transmission of ARGs in the wild fish and relevant water environment were rarely reported. Here, we have profiled ARGs and bacterial communities in wild freshwater fish and relevant water in a peri-urban river using highthroughput qPCR and 16 S rRNA gene sequence. A total of 80 and 220 unique ARG subtypes were identified in fish and water samples. Fish and water both showed significant ARG seasonal variations( P < 0.05). The highest absolute abundance of ARGs in fish and water occurred in summer(1.32 × 10^(9) copies per g, on average) and autumn(9.04 × 10^(6) copies per mL), respectively. In addition, the bipartite network analysis showed that 9 ARGs and 1 mobile genetic element continuously shared in fish and water. Furthermore, bacteria shared in fish and water were found to significantly correlate with shard ARGs. The findings demonstrate that bacteria and ARGs in fish and water could interconnect and ARGs might transfer between fish and water using bacteria as a spreading medium.
