Rivers link terrestrial ecosystems and marine ecosystems, and they transport large amounts of substances into oceans each year, including several forms of silicon(Si), carbon(C), and other nutrients. However, river da...Rivers link terrestrial ecosystems and marine ecosystems, and they transport large amounts of substances into oceans each year, including several forms of silicon(Si), carbon(C), and other nutrients. However, river damming affects the water flow and biogeochemical cycles of Si, C, and other nutrients through biogeochemical interacting processes. In this review, we first summarize the current understanding of the effects of river damming on the processes of biogeochemical Si cycle, especially the source, composition, and recycling process of biogenic silica(BSi). Then, we introduce dam impacts on the cycles of C and some other nutrients. Dissolved silicon in rivers is mainly released from phytolith dissolution and silicate weathering. BSi in suspended matter or sediments in most rivers mainly consists of phytoliths and mainly originates from soil erosion. However, diatom growth and deposition in many reservoirs formed by river interception may significantly increase the contribution of diatom Si to total BSi, and thus significantly influence the biogeochemical Si,C, and nutrient cycles. Yet the turnover of phytoliths and diatoms in different rivers formed by river damming is still poorly quantified. Thus, they should be further investigated to enhance our understanding about the effects of river damming on global biogeochemical Si, C and nutrient cycles.展开更多
The interactions and mechanisms between sulfur and heavy metals are a growing focus of biogeochemical studies in coastal wetlands.These issues underline the fate of heavy metals bound in sediments or released into the...The interactions and mechanisms between sulfur and heavy metals are a growing focus of biogeochemical studies in coastal wetlands.These issues underline the fate of heavy metals bound in sediments or released into the system through sediments.Despite the fact that numerous published studies have suggested sulfur has a significant impact on the bioavailability of heavy metals accumulated in coastal wetlands,to date,no review article has systematically summarized those studies,particularly from the perspective of the three major components of wetland ecosystems(sediments,rhizosphere,and vegetation).The present review summarizes the studies published in the past four decades and highlights the major achievements in this field.Research and studies available thus far indicate that under anaerobic conditions,most of the potentially bioavailable heavy metals in coastal wetland sediments are fixed as precipitates,such as metal sulfides.However,fluctuations in physicochemical conditions may affect sulfur cycling,and hence,directly or indirectly lead to the conversion and migration of heavy metals.In the rhizosphere,root activities and microbes together affect the speciation and transformation of sulfur which in turn mediate the migration of heavy metals.As for plant tissues,tolerance to heavy metals is enhanced by sulfur-containing compounds via promoting a series of chelation and detoxification processes.Finally,to further understand the interactions between sulfur and heavy metals in coastal wetlands,some major future research directions are proposed.展开更多
Among the impacts of climate change,there is the intensification of phenomena such as the El Niño South-ern Oscillation(ENSO)responsible for El Niño and La Niña.However,understanding their effects on th...Among the impacts of climate change,there is the intensification of phenomena such as the El Niño South-ern Oscillation(ENSO)responsible for El Niño and La Niña.However,understanding their effects on the functional pro-cesses of forests is limited.Therefore,this study evaluated the effects of ENSO on litter stock and water holding capac-ity(WHC)in a successional forest in eastern Amazonia.Evaluations occurred in periods with the most rainfall in El Niño(2019)and least in La Niña(2021)years.Twelve permanent plots were used to sample litter.ENSO effects were evident for WHC,higher during El Niño.However,this influence was not clear for litter,as only in the rainy season effects were found.There was a positive correlation of WHC with precipitation and humidity,while litter stocks were negatively correlated with temperature and wind speed.Although the subject of this study requires long-term assessments,preliminary results suggests that,depending on the intensity of ENSO,forest functional processes can be strongly impacted and altered.The conclusion reinforces warnings by the scientific community about the impacts of climate change on the maintenance of litter stocks,decomposition and,consequently,the biogeochemical cycle and essential ecosystem services for the maintenance of Amazonia biodiversity.The need to develop long-term research to understand the effects of climatic change on litter stocks and water holding capacity is highlighted,especially in Amazonia.展开更多
Biochar offers several benefits as a soil amendment, including increased soil fertility, carbon sequestration, and water-holding capacity in nutrient-poor soils. Here, we performed a series of enzyme assays on pine bi...Biochar offers several benefits as a soil amendment, including increased soil fertility, carbon sequestration, and water-holding capacity in nutrient-poor soils. Here, we performed a series of enzyme assays on pine biochar-amended soils, comparing multiple enzyme activities (EAs) simultaneously determined in the same soil sample vs. the sum of individual EAs involved in the C, N, S, and P cycles to provide information of the impacts of biochar on biogeochemical cycling. The combination of these four EAs has been considered an indicator of soil health due to their role in the reactions that release bioavailable nutrients in the cycling of C (β-glucosidase), N and C (β-glucosaminidase), P (acid phosphomonoesterase), and S (aryl-sulfatase) in soils. Comparisons of the theoretical EAs and the CNPS activity assay approaches in the biochar-modified soil revealed similar activity trends with the different concentrations of added biochar. Two years after adding biochar, study results showed the amended soils did not retain more pNP substrate than the un-amended control soils in three different pH buffers (5.5, 5.8, and 6.5) commonly used in EA reactions. Finally, we performed a third experiment to determine if the biochar previously added to the EAs interfered with the reactions’ enzyme or substrate. The results indicated that greater activity was measured using the combined assay, which suggests the CNPS activity method was less affected by biochar than the individual EAs. Our findings indicate that the potential soil biochemical-health index, CNPS activity (combination of four enzymes) assay is more robust than the individual EAs and can be used as an alternative tool to monitor soil functioning.展开更多
Despite a large variety of processes that can control Mo and its potential to become an environmental tracer of euxinic environment, this element is not often studied in lakes. The aim of this paper is to identify mai...Despite a large variety of processes that can control Mo and its potential to become an environmental tracer of euxinic environment, this element is not often studied in lakes. The aim of this paper is to identify main seasonal biogeochemical processes that involve Mo in a well constrained freshwater system (Lake Pavin water-column) in order to evaluate their respective importance. In Lake Pavin, 4 main processes have been identified: 1) the transitional process represented by Mo assimilation of by phytoplankton in the epilimnion (nitrogen biological fixation and nitrate assimilation);2) transient process represented by dissolved Mo adsorption onto Fe and Mn metal oxides at oxic/anoxic interface (depth 50 - 60 m);3) Mo precipitation where apparent sulfide production rate is maximum, and from 80 m depths;4) release of dissolved Mo due to Mo benthic flux or input from a deep source.展开更多
The contribution of phytoliths to total biogenic silica(BSi) volumes in rivers worldwide,and the associated implications for the biogeochemical cycle,require in-depth study.Based on samples from rivers in Peninsular M...The contribution of phytoliths to total biogenic silica(BSi) volumes in rivers worldwide,and the associated implications for the biogeochemical cycle,require in-depth study.Based on samples from rivers in Peninsular Malaysia,this project investigated the source and characteristics of B Si found in Asian tropical rivers,as well as the process of reverse weathering taking place in these fluvial systems.Results indicated that BSi samples collected in sediments consisted of phytolith,diatom and sponge spicules.Phytoliths,predominantly of the elongate form,comprised 92.8%-98.3% of BSi in the Pahang River.Diatom BSi in this river consisted mainly of pennatae diatoms,but represented a relatively small proportion of the total BSi volume.However,diatom BSi(predominantly of the Centricae form) was more prevalent in the Pontian and Endau Rivers with shares of 68.8% and 79.3% of the total BSi volumes,respectively,than Pahang River.Carbon contents of the BSi particulates ranged from 1.85% to 10.8% with an average of 4.79%.These values are higher than those recorded in other studies to date,and indicate that BSi plays a major role in controlling permanent carbon burial.This study suggests that phytoliths from terrestrial plants are the primary constituents of BSi in the rivers of Peninsular Malaysia,and therefore represent a significant proportion of the coastal silica budget.展开更多
The Baixada Santista coastal region is well known in the context of the high atmospheric, soil and aquatic pollution levels derived from port, industrial, domestic and urban activities existent there, mainly in functi...The Baixada Santista coastal region is well known in the context of the high atmospheric, soil and aquatic pollution levels derived from port, industrial, domestic and urban activities existent there, mainly in function of the Cubat<span style="white-space:nowrap;">ã</span>o industrial pole and port of Santos. The contamination by trace metals in this region is rarely measured in water column when compared with metal determinations in sediment studies. This study aims to evidence the levels of dissolved copper and total cadmium concentrations in estuarine and seawater waters using electrochemical analysis as a chronopotentiometric stripping polarography, which could improve the environmental monitoring program. The study was performed in the Bay of Santos reaching two estuarine channels (Santos and S<span style="white-space:nowrap;">ã</span>o Vicente Channels) in two tide periods in summer 2001. This region is influenced by terrestrial and anthropogenic inputs of trace metals to seawater. The results showed that dissolved copper and total cadmium in water presented the maxima concentrations of 45.4 nM and 2.6 nM respectively. They not reached the limits proposed by Brazilian Environmental Law (CONAMA), that indicate, as reference, a maximum of 123 nM and 350 nM for dissolved copper and total cadmium, respectively and, considering seawater coastal system (salinity > 30, class 2) and also brackish water (class 2). Although the values were under the maximum recommended for each metal, the concentrations were not negligible in relation to the other polluted areas in the world. The values distribution along the system showed a progressive increase in direction to the inner part of the system that naturally compromises the local biota whose is more exposed to the bioaccumulation processes, and this data corresponds to an important reference preterit value to the monitoring program. The trace metal bioaccumulation by mangrove vegetation and by the biota in the internal part of the estuarine channels increase the risk of the poorly population that living in the internal part of the estuary, used to the seafood consumption. The contribution of this study is important to guide the protective policies destined to recuperate the natural conditions of this system, mainly considering that in the decade 1980, there was a case of toxic contamination, causing hydrocephaly in newborns. It proves the existence of risks to the human health and to the balance of the ecosystem, even with the decrease of pollution after that, the environmental evaluation needs to know the background values to guide environmental protection.展开更多
Seasonal soil freeze-thaw events may enhance soil nitrogen transformation and thus stimulate nitrous oxide(N_2O)emissions in cold regions.However,the mechanisms of soil N_2O emission during the freeze-thaw cycling in ...Seasonal soil freeze-thaw events may enhance soil nitrogen transformation and thus stimulate nitrous oxide(N_2O)emissions in cold regions.However,the mechanisms of soil N_2O emission during the freeze-thaw cycling in the field remain unclear.We evaluated N_2O emissions and soil biotic and abiotic factors in maize and paddy fields over 20 months in Northeast China,and the structural equation model(SEM)was used to determine which factors affected N_2O production during non-growing season.Our results verified that the seasonal freeze-thaw cycles mitigated the available soil nitrogen and carbon limitation during spring thawing period,but simultaneously increased the gaseous N_2O-N losses at the annual time scale under field condition.The N_2O-N cumulative losses during the non-growing season amounted to 0.71 and 0.55 kg N ha^(–1) for the paddy and maize fields,respectively,and contributed to 66 and 18%of the annual total.The highest emission rates(199.2–257.4μg m^(–2) h^(–1))were observed during soil thawing for both fields,but we did not observe an emission peak during soil freezing in early winter.Although the pulses of N_2O emission in spring were short-lived(18 d),it resulted in approximately80%of the non-growing season N_2O-N loss.The N_2O burst during the spring thawing was triggered by the combined impact of high soil moisture,flush available nitrogen and carbon,and rapid recovery of microbial biomass.SEM analysis indicated that the soil moisture,available substrates including NH_4^+and dissolved organic carbon(DOC),and microbial biomass nitrogen(MBN)explained 32,36,16 and 51%of the N_2O flux variation,respectively,during the non-growing season.Our results suggested that N_2O emission during the spring thawing make a vital contribution of the annual nitrogen budget,and the vast seasonally frozen and snow-covered croplands will have high potential to exert a positive feedback on climate change considering the sensitive response of nitrogen biogeochemical cycling to the freeze-thaw disturbance.展开更多
Magnetotactic bacteria(MTB)are ubiquitous prokaryotes that orient along magnetic field lines due to magnetosomes’biomineralization within the cell.These structures are ferrimagnetic organelles that impart a magnetic ...Magnetotactic bacteria(MTB)are ubiquitous prokaryotes that orient along magnetic field lines due to magnetosomes’biomineralization within the cell.These structures are ferrimagnetic organelles that impart a magnetic moment to the cell.To succeed in producing magnetosomes,MTB accumulate iron in(i)cytoplasm;(ⅱ)magnetosomes;and(ⅲ)nearby the organelle.It has already been estimated that a single MTB has an iron content of 10 to 100-fold higher than Escherichia coli.Phages are the most abundant entity in oceans and are known for controlling nutrient flow such as carbon and nitrogen by viral shunt and pump.The current work addresses the putative role of phages that infect MTB on the iron biogeochemical cycle.Can phage infection in MTB hosts cause a biogenic iron fertilization-like event in localized microenvironments?Are phages critical players in driving magnetosome biomineralization genes(BGs)horizontal transfer?Further investigation of those events,including frequency of occurrence,is necessary to fully comprehend MTB’s effect on iron cycling in aqueous environments.展开更多
In Earth systems,thousands of terragrams(Tg)(1 Tg=10^(12) g)of mineral nanoparticles move around annually.Some mineral nanoparticles have exhibited unexpected intrinsic enzyme-like characteristics(so called“mineral n...In Earth systems,thousands of terragrams(Tg)(1 Tg=10^(12) g)of mineral nanoparticles move around annually.Some mineral nanoparticles have exhibited unexpected intrinsic enzyme-like characteristics(so called“mineral nanozymes”),and are ubiquitously distributed in natural ecosystems such as the atmosphere,oceans,waters,and soils.Compared with natural enzymes,these mineral nanozymes have several advantages such as tunable catalytic efficiency and robustness to harsh conditions,e.g.,heat,acid,and alkaline conditions.As mineral nanozymes are new products of multidisciplinary cross-cutting,they have been widely applied in various fields.This review,for the first time,systematically introduces the species and properties of mineral nanozymes in Earth systems,discusses the critical roles played by nanozymes in environmental biogeochemical cycles,compiles the interfacial processes and mechanisms of mineral nanozymes,and provides an overview of the future prospects of mineral nanozymes.展开更多
River damming is believed to largely intercept nutrients,particularly retain more phosphorus(P)than nitrogen(N),and thus harm primary productivity,fishery catches,and food security downstream,which seriously constrain...River damming is believed to largely intercept nutrients,particularly retain more phosphorus(P)than nitrogen(N),and thus harm primary productivity,fishery catches,and food security downstream,which seriously constrain global hydropower development and poverty relief in undeveloped regions and can drive geo-political disputes between nations along trans-boundary rivers.In this study,we investigated whether reservoirs can instead improve nutrient regimes downstream.We measured different species of N and P as well as microbial functions in water and sediment of cascade reservoirs in the upper Mekong River over 5 years and modelled the influx and outflux of N and P species in each reservoir.Despite partially retaining total N and total P,reservoirs increased the downstream flux of ammonium and soluble reactive phosphorus(SRP).The increase in ammonium and SRP between outflux and influx showed positive linear relationships with the hydraulic residence time of the cascade reservoirs;and the ratio of SRP to dissolved inorganic nitrogen increased along the reservoir cascade.The lentic environment of reservoirs stimulated algae-mediated conversion of nitrate into ammonium in surface water;the hypoxic condition and the priming effect of algae-induced organic matter enhanced release of ammonium from sediment;the synergy of microbial phosphorylation,reductive condition and sediment geochemical properties increased release of SRP.This study is the first to provide solid evidence that hydropower reservoirs improve downstream nutrient bioavailability and N-P balance through a process of retention-transformation-transport,which may benefit primary productivity.These findings could advance our understanding of the eco-environmental impacts of river damming.展开更多
Partial substitution of synthetic nitrogen(N)with organic fertilizers(PSOF)is of great significance in improving soil ecosystem functions in systems that have deteriorated due to the excessive application of chemical ...Partial substitution of synthetic nitrogen(N)with organic fertilizers(PSOF)is of great significance in improving soil ecosystem functions in systems that have deteriorated due to the excessive application of chemical N fertilizer.However,existing studies typically focus on individual soil functions,neglecting the fact that multiple functions occur simultaneously.It remains unclear how PSOF influences multiple soil functions and whether these impacts are related to soil microbial communities.Here,we examined the impacts of partial substitutions(25%–50%)of chemical N fertilizer with organic form(pig manure or municipal sludge)in a vegetable field on soil multifunctionality,by measuring a range of soil functions involving primary production(vegetable yield and quality),nutrient cycling(soil enzyme activities,ammonia volatilization,N leaching,and N runoff),and climate regulation(soil organic carbon sequestration and nitrous oxide emission).We observed that PSOF improved soil multifunctionality,with a 50%substitution of chemical N fertilizer with pig manure being the best management practice;the result was strongly related to the diversities and network complexities of bacteria and fungi.Random forest analysis further revealed that soil multifunctionality was best explained by the bacterial-fungal network complexity,followed by available phosphorus level and bacterial diversity.The PSOF also shifted the composition of bacterial and fungal communities,with increased relative abundances of dominant bacteria phyla,such as Bacteroidetes,Gemmatimonadetes,and Myxococcota,and fungal phyla,such as Basidiomycota and Olpidiomycota.The observed increases in soil multifunctionality were consistent with significant increases in the relative abundances of keystone taxa such as Blastocladiomycota,Chaetomiaceae,and Nocardiopsaceae.Together,these findings indicate that PSOF can enhance interactions within and among microbial communities and that such practices have the potential to improve soil ecosystem multifunctionality and contribute to the development of sustainable agriculture.展开更多
Comprehensive nitrogen biogeochemical cycle has been reconstructed for representative lacustrine organic-rich sedimentary rock in China,namely the Triassic Yanchang Formation(YF,199–230 Ma)in Ordos and the Cretaceous...Comprehensive nitrogen biogeochemical cycle has been reconstructed for representative lacustrine organic-rich sedimentary rock in China,namely the Triassic Yanchang Formation(YF,199–230 Ma)in Ordos and the Cretaceous Qingshankou Formation(QF,86–92 Ma)in Songliao basins,by evaluating the organic and inorganic nitrogen isotopic compositions rather than only organic or bulk nitrogen isotopic compositions.The results indicate that the nitrogen isotope values of bulk rock(δ^(15)N_(bulk))in the non-metamorphic stage are significantly different from that of kerogen,which challenge the conceptual framework of sedimentary nitrogen isotope interpretation.Theδ^(15)N_(bulk)from the YF and QF were lower than their respective the nitrogen isotope values of kerogen(δ^(15)N_(ker)),with offsets up to5.1‰,which have the inverse relationship for the metamorphosed rock.Thermal evolution did not significantly modify the d15N of bulk rock and kerogen.The d15N of sediments from the YF(δ^(15)N_(bulk),1.6‰–5.6‰)were lower than that of rock from the QF(δ^(15)N_(bulk),10.2‰–15.3‰).The nitrogen isotope values of silicate incorporated nitrogen(δ^(15)N_(sil))were slightly lower than those of the d15Nker in the YF and obviously lower for the QF.The fact that different nitrogen cycles occur in the YF and QF due to the different depositional redox conditions leads to different isotopic results.The YF water environment dominated by oxic conditions is not conducive to the occurrence of denitrification and anammox,and no abundant N2 loss leads to the relatively lightδ^(15)N_(bulk).In the stratified water for the QF,redox transition zone promotes denitrification and anammox,resulting in the heavyδ^(15)N_(bulk)of rock and promotes the DNRA,resulting in heavyδ^(15)N_(ker)and lowδ^(15)N_(sil).展开更多
Greenhouse gas(GHG)-induced climate change is among the most pressing sustainability challenges facing humanity today,posing serious risks for ecosystem health.Methane(CH_(4))and nitrous oxide(N_(2)O)are the two most ...Greenhouse gas(GHG)-induced climate change is among the most pressing sustainability challenges facing humanity today,posing serious risks for ecosystem health.Methane(CH_(4))and nitrous oxide(N_(2)O)are the two most important GHGs after carbon dioxide(CO_(2)),but their regional and global budgets are not well known.In this study,we applied a process-based coupled biogeochemical model to concurrently estimate the magnitude and spatial and temporal patterns of CH_(4)and N_(2)O fluxes as driven by multiple environmental changes,including climate variability,rising atmospheric CO_(2),increasing nitrogen deposition,tropospheric ozone pollution,land use change,and nitrogen fertilizer use.The estimated CH_(4)and N_(2)O emissions from global land ecosystems during 1981-2010 were 144.39±12.90 Tg C/yr(mean 62 SE;1 Tg=1012 g)and 12.52±0.74 Tg N/yr,respectively.Our simulations indicated a significant(P,0.01)annually increasing trend for CH_(4)(0.43±0.06 Tg C/yr)and N_(2)O(0.14±0.02 Tg N/yr)in the study period.CH_(4)and N_(2)O emissions increased significantly in most climatic zones and continents,especially in the tropical regions and Asia.The most rapid increase in CH_(4)emission was found in natural wetlands and rice fields due to increased rice cultivation area and climate warming.N_(2)O emission increased substantially in all the biome types and the largest increase occurred in upland crops due to increasing air temperature and nitrogen fertilizer use.Clearly,the three major GHGs(CH_(4),N_(2)O,and CO_(2))should be simultaneously considered when evaluating if a policy is effective to mitigate climate change.展开更多
Aquatic viruses are naturally present in the aquatic environment and the number of viruses is staggering.Various multicellular organisms in aquatic ecosystems may be infected,cross-species transmitted,manipulated,and ...Aquatic viruses are naturally present in the aquatic environment and the number of viruses is staggering.Various multicellular organisms in aquatic ecosystems may be infected,cross-species transmitted,manipulated,and killed by aquatic viruses,which can lead to cascading ecological effects.The viruses in unicellular aquatic organisms can alter interactions between host individuals,and are essential in effecting or maintaining the dynamics of aquatic microbial communities,horizontal gene transfer,biodiversity,and modulating ecological processes globally.Meanwhile,hosts also impact viral abundance and diversity.Microbial diversity drives multifunctionality in ecosystems,while viruses shape complex microbial communities and are crucial for ecosystem functioning.This review focuses on molecular,genetic,evolutionary,and ecosystemic advances related to emerging and reemerging aquatic viruses,presents the contexts,novel tools,and investigative approaches pertaining to the study of aquatic virology,and discusses the mechanisms by which viruses affect aquatic ecosystems.The paper provides an efficient and broadly-based blueprint for improving understanding of aquatic viruses.展开更多
Iron(Fe)is an important element for the terrestrial and marine ecosystems through its biogeochemical cycling on the Earth’s surface.China has a long rice cultivation history,with extensive rice distribution across ma...Iron(Fe)is an important element for the terrestrial and marine ecosystems through its biogeochemical cycling on the Earth’s surface.China has a long rice cultivation history,with extensive rice distribution across many types of paddy soils.Paddy soils are the largest anthropogenic wetlands on earth with critical roles in ecosystem functions.The periodic artificial submergence and drainage during paddy soil evolution result in significant changes in soil moisture regime and redox conditions from the natural soils,which facilitate the increase of Fe solubility and mobilization.However,there is a lack of systematic assessment on the magnitude of the migration and loss amount of Fe from paddy soils.In order to quantify the Fe loss and assess the dynamic evolution of Fe in the soils after rice cultivation,seven paddy soil chronosequences derived from different landscapes(bog,plain,terrace)and parent materials(acidic,neutral,calcareous)with cultivation history from 0 to 2,000 yr were studied.Results showed that the rates and trajectories of Fe evolution showed distinct patterns among the studied seven paddy soil chronosequences.However,net losses of Fe from 1 m soil depth occurred at all studied paddy soil chronosequences regardless of the original landscapes and parent materials.Fe in the paddy soils derived from the calcareous lacustrine sediments in the bog area showed a slight accumulation during the initial stage(50 yr)of paddy cultivation,with a loss rate of0.026 kg m^(-2)yr^(-1) during the 50-to 500-yr time period.For the paddy soils developed on the calcareous marine sediments in the plain area,Fe evolution was dominated by the internal movement in soil profiles through coupled reducing-eluviation reactions in the surface horizons and oxidation-illuviation in the subsurface horizons within 1,000 yr of paddy cultivation,with an averaged net loss rate of 0.029 kg m^(-2)yr^(-1) during the 1,000-to 2,000-yr time period of rice cultivation.In contrast,Fe in the paddy soils derived from the acidic and neutral parent materials in the plain and terraced upland areas was rapidly lost during the initial stage of paddy cultivation,with a maximum loss rate of 1.106 kg m^(-2)yr^(-1),while the Fe loss rate decreased gradually with increasing paddy cultivation age.Soil pH,CaCO_(3),and organic matter contents of the original soils,the length of time of paddy cultivation,landscape types and positions,and changes in soil moisture regime and redox condition induced by artificial submergence and drainage were the main factors controlling the rates and trajectories of Fe loss during paddy soils evolution.The amount of Fe loss caused by rice cultivation at the national scale was estimated based on the data collected from this study and the literature.The Fe loss fluxes of paddy soils in China were about 46.4–195.7 Tg yr^(-1),and the amounts of Fe losses from paddy fields nationwide were about 5,121.5–9,412.2 Tg.Quantifying Fe loss from paddy fields is important to scientifically assess the impact of paddy cultivation on the Fe biogeochemical cycle.展开更多
The magnitude of mass flux is closely associated with biogeochemical watershed processes,which can generate a considerable amount of pertinent information.Moreover,both the accuracy and precision of mass flux estimati...The magnitude of mass flux is closely associated with biogeochemical watershed processes,which can generate a considerable amount of pertinent information.Moreover,both the accuracy and precision of mass flux estimation results directly affects the perception of the ecological environmental status,which in turn affects both the formulation and implementation of river basin management planning.In practical applications,the true value of flux is unknown and can only be estimated.Flux results obtained using different monitoring and estimation methods also differ significantly.However,in existing studies on mass flux associated with biogeochemical watershed interfaces,the application of monitoring and estimation methods lacks uniform criteria or references.Accordingly,this study summarizes and deconstructs results from recent studies on biogeochemical watershed interface processes and compares the advantages,disadvantages and applicability of the monitoring and estimation methods used by these studies.This particular study is intended to be used as a reference for the selection of flux calculation methods.展开更多
Graphene-based nanomaterials(GBNs)are likely to be entering the soil environment in increasing amounts via consumer products.However,the disturbance of bacterial communities and their associated ecological functions b...Graphene-based nanomaterials(GBNs)are likely to be entering the soil environment in increasing amounts via consumer products.However,the disturbance of bacterial communities and their associated ecological functions by GBNs remains elusive.We performed a soil incubation experiment with the addition of graphene oxide(GO)and reduced graphene oxide(RGO).The Illumina sequencing technique was used to investigate changes in bacterial communities,and the functional groups of the communities were analyzed using the functional annotation of prokaryotic taxa database.After 90 days of exposure,RGO induced a lower bacterial richness than GO.However,GO induced larger changes in community composition and functions than RGO.After exposure to GBNs,some of the functional groups associated with organic matter degradation and biogeochemical cycling of nitrogen and sulfur decreased.However,the functional group associated with aromatic compound degradation increased,possibly because GBNs contain rich aromatic hydrocarbon structures,which are tolerated by this functional group.展开更多
With a rich variety of chemical energy sources and steep physical and chemical gradients,hydrothermal vent systems offer a range of habitats to support microbial life.Cultivation-dependent and independent studies have...With a rich variety of chemical energy sources and steep physical and chemical gradients,hydrothermal vent systems offer a range of habitats to support microbial life.Cultivation-dependent and independent studies have led to an emerging view that diverse microorganisms in deep-sea hydrothermal vents live their chemolithoautotrophic,heterotrophic,or mixotrophic life with versatile metabolic strategies.Biogeochemical processes are mediated by microorganisms,and notably,processes involving or coupling the carbon,sulfur,hydrogen,nitrogen,and metal cycles in these unique ecosystems.Here,we review the taxonomic and physiological diversity of microbial prokaryotic life from cosmopolitan to endemic taxa and emphasize their significant roles in the biogeochemical processes in deep-sea hydrothermal vents.According to the physiology of the targeted taxa and their needs inferred from meta-omics data,the media for selective cultivation can be designed with a wide range of physicochemical conditions such as temperature,pH,hydrostatic pressure,electron donors and acceptors,carbon sources,nitrogen sources,and growth factors.The application of novel cultivation techniques with real-time monitoring of microbial diversity and metabolic substrates and products are also recommended.展开更多
基金the support from the State's Key Project of Research and Development Plan of China (2016YFA0601002)the National Natural Science Foundation of China (41522207,41571130042)
文摘Rivers link terrestrial ecosystems and marine ecosystems, and they transport large amounts of substances into oceans each year, including several forms of silicon(Si), carbon(C), and other nutrients. However, river damming affects the water flow and biogeochemical cycles of Si, C, and other nutrients through biogeochemical interacting processes. In this review, we first summarize the current understanding of the effects of river damming on the processes of biogeochemical Si cycle, especially the source, composition, and recycling process of biogenic silica(BSi). Then, we introduce dam impacts on the cycles of C and some other nutrients. Dissolved silicon in rivers is mainly released from phytolith dissolution and silicate weathering. BSi in suspended matter or sediments in most rivers mainly consists of phytoliths and mainly originates from soil erosion. However, diatom growth and deposition in many reservoirs formed by river interception may significantly increase the contribution of diatom Si to total BSi, and thus significantly influence the biogeochemical Si,C, and nutrient cycles. Yet the turnover of phytoliths and diatoms in different rivers formed by river damming is still poorly quantified. Thus, they should be further investigated to enhance our understanding about the effects of river damming on global biogeochemical Si, C and nutrient cycles.
基金This work was supported by the National Natural Science Foundation of China(Grant Nos.32071521,31800429,and 42067012)the Natural Science Foundation of Jiangsu Province(Nos.BK20170540 and BK20210751)+2 种基金the Scientific Research Foundation for Senior Talent of Jiangsu University,China(No.20JDG067)the Science and Technology Program of Gansu Province of China(No.20JR5RA532)the MEL Visiting Fellowship of Xiamen University and Jiangsu Collaborative Innovation Center of Technology and Material of Water Treatment,China.
文摘The interactions and mechanisms between sulfur and heavy metals are a growing focus of biogeochemical studies in coastal wetlands.These issues underline the fate of heavy metals bound in sediments or released into the system through sediments.Despite the fact that numerous published studies have suggested sulfur has a significant impact on the bioavailability of heavy metals accumulated in coastal wetlands,to date,no review article has systematically summarized those studies,particularly from the perspective of the three major components of wetland ecosystems(sediments,rhizosphere,and vegetation).The present review summarizes the studies published in the past four decades and highlights the major achievements in this field.Research and studies available thus far indicate that under anaerobic conditions,most of the potentially bioavailable heavy metals in coastal wetland sediments are fixed as precipitates,such as metal sulfides.However,fluctuations in physicochemical conditions may affect sulfur cycling,and hence,directly or indirectly lead to the conversion and migration of heavy metals.In the rhizosphere,root activities and microbes together affect the speciation and transformation of sulfur which in turn mediate the migration of heavy metals.As for plant tissues,tolerance to heavy metals is enhanced by sulfur-containing compounds via promoting a series of chelation and detoxification processes.Finally,to further understand the interactions between sulfur and heavy metals in coastal wetlands,some major future research directions are proposed.
基金This study was funded in part by Coordenação de Aperfeiçoamento de Pessoal de Nível Superior Brazil(CAPES)Finance Code 001.A master’s scholarship was granted by CAPES to JIMR(Process 88887.716287/2022-00)a doctoral scholarship to VPO(Process 88887.644953/2021-00).
文摘Among the impacts of climate change,there is the intensification of phenomena such as the El Niño South-ern Oscillation(ENSO)responsible for El Niño and La Niña.However,understanding their effects on the functional pro-cesses of forests is limited.Therefore,this study evaluated the effects of ENSO on litter stock and water holding capac-ity(WHC)in a successional forest in eastern Amazonia.Evaluations occurred in periods with the most rainfall in El Niño(2019)and least in La Niña(2021)years.Twelve permanent plots were used to sample litter.ENSO effects were evident for WHC,higher during El Niño.However,this influence was not clear for litter,as only in the rainy season effects were found.There was a positive correlation of WHC with precipitation and humidity,while litter stocks were negatively correlated with temperature and wind speed.Although the subject of this study requires long-term assessments,preliminary results suggests that,depending on the intensity of ENSO,forest functional processes can be strongly impacted and altered.The conclusion reinforces warnings by the scientific community about the impacts of climate change on the maintenance of litter stocks,decomposition and,consequently,the biogeochemical cycle and essential ecosystem services for the maintenance of Amazonia biodiversity.The need to develop long-term research to understand the effects of climatic change on litter stocks and water holding capacity is highlighted,especially in Amazonia.
文摘Biochar offers several benefits as a soil amendment, including increased soil fertility, carbon sequestration, and water-holding capacity in nutrient-poor soils. Here, we performed a series of enzyme assays on pine biochar-amended soils, comparing multiple enzyme activities (EAs) simultaneously determined in the same soil sample vs. the sum of individual EAs involved in the C, N, S, and P cycles to provide information of the impacts of biochar on biogeochemical cycling. The combination of these four EAs has been considered an indicator of soil health due to their role in the reactions that release bioavailable nutrients in the cycling of C (β-glucosidase), N and C (β-glucosaminidase), P (acid phosphomonoesterase), and S (aryl-sulfatase) in soils. Comparisons of the theoretical EAs and the CNPS activity assay approaches in the biochar-modified soil revealed similar activity trends with the different concentrations of added biochar. Two years after adding biochar, study results showed the amended soils did not retain more pNP substrate than the un-amended control soils in three different pH buffers (5.5, 5.8, and 6.5) commonly used in EA reactions. Finally, we performed a third experiment to determine if the biochar previously added to the EAs interfered with the reactions’ enzyme or substrate. The results indicated that greater activity was measured using the combined assay, which suggests the CNPS activity method was less affected by biochar than the individual EAs. Our findings indicate that the potential soil biochemical-health index, CNPS activity (combination of four enzymes) assay is more robust than the individual EAs and can be used as an alternative tool to monitor soil functioning.
文摘Despite a large variety of processes that can control Mo and its potential to become an environmental tracer of euxinic environment, this element is not often studied in lakes. The aim of this paper is to identify main seasonal biogeochemical processes that involve Mo in a well constrained freshwater system (Lake Pavin water-column) in order to evaluate their respective importance. In Lake Pavin, 4 main processes have been identified: 1) the transitional process represented by Mo assimilation of by phytoplankton in the epilimnion (nitrogen biological fixation and nitrate assimilation);2) transient process represented by dissolved Mo adsorption onto Fe and Mn metal oxides at oxic/anoxic interface (depth 50 - 60 m);3) Mo precipitation where apparent sulfide production rate is maximum, and from 80 m depths;4) release of dissolved Mo due to Mo benthic flux or input from a deep source.
基金Supported by the National Natural Science Foundation of China(Nos.41106072,41376093)the International Collaboration Science Plan(No.GASI-01-02-01-04)
文摘The contribution of phytoliths to total biogenic silica(BSi) volumes in rivers worldwide,and the associated implications for the biogeochemical cycle,require in-depth study.Based on samples from rivers in Peninsular Malaysia,this project investigated the source and characteristics of B Si found in Asian tropical rivers,as well as the process of reverse weathering taking place in these fluvial systems.Results indicated that BSi samples collected in sediments consisted of phytolith,diatom and sponge spicules.Phytoliths,predominantly of the elongate form,comprised 92.8%-98.3% of BSi in the Pahang River.Diatom BSi in this river consisted mainly of pennatae diatoms,but represented a relatively small proportion of the total BSi volume.However,diatom BSi(predominantly of the Centricae form) was more prevalent in the Pontian and Endau Rivers with shares of 68.8% and 79.3% of the total BSi volumes,respectively,than Pahang River.Carbon contents of the BSi particulates ranged from 1.85% to 10.8% with an average of 4.79%.These values are higher than those recorded in other studies to date,and indicate that BSi plays a major role in controlling permanent carbon burial.This study suggests that phytoliths from terrestrial plants are the primary constituents of BSi in the rivers of Peninsular Malaysia,and therefore represent a significant proportion of the coastal silica budget.
文摘The Baixada Santista coastal region is well known in the context of the high atmospheric, soil and aquatic pollution levels derived from port, industrial, domestic and urban activities existent there, mainly in function of the Cubat<span style="white-space:nowrap;">ã</span>o industrial pole and port of Santos. The contamination by trace metals in this region is rarely measured in water column when compared with metal determinations in sediment studies. This study aims to evidence the levels of dissolved copper and total cadmium concentrations in estuarine and seawater waters using electrochemical analysis as a chronopotentiometric stripping polarography, which could improve the environmental monitoring program. The study was performed in the Bay of Santos reaching two estuarine channels (Santos and S<span style="white-space:nowrap;">ã</span>o Vicente Channels) in two tide periods in summer 2001. This region is influenced by terrestrial and anthropogenic inputs of trace metals to seawater. The results showed that dissolved copper and total cadmium in water presented the maxima concentrations of 45.4 nM and 2.6 nM respectively. They not reached the limits proposed by Brazilian Environmental Law (CONAMA), that indicate, as reference, a maximum of 123 nM and 350 nM for dissolved copper and total cadmium, respectively and, considering seawater coastal system (salinity > 30, class 2) and also brackish water (class 2). Although the values were under the maximum recommended for each metal, the concentrations were not negligible in relation to the other polluted areas in the world. The values distribution along the system showed a progressive increase in direction to the inner part of the system that naturally compromises the local biota whose is more exposed to the bioaccumulation processes, and this data corresponds to an important reference preterit value to the monitoring program. The trace metal bioaccumulation by mangrove vegetation and by the biota in the internal part of the estuarine channels increase the risk of the poorly population that living in the internal part of the estuary, used to the seafood consumption. The contribution of this study is important to guide the protective policies destined to recuperate the natural conditions of this system, mainly considering that in the decade 1980, there was a case of toxic contamination, causing hydrocephaly in newborns. It proves the existence of risks to the human health and to the balance of the ecosystem, even with the decrease of pollution after that, the environmental evaluation needs to know the background values to guide environmental protection.
基金supported by the National Science and Technology Major Project of China (2014ZX07201-009)
文摘Seasonal soil freeze-thaw events may enhance soil nitrogen transformation and thus stimulate nitrous oxide(N_2O)emissions in cold regions.However,the mechanisms of soil N_2O emission during the freeze-thaw cycling in the field remain unclear.We evaluated N_2O emissions and soil biotic and abiotic factors in maize and paddy fields over 20 months in Northeast China,and the structural equation model(SEM)was used to determine which factors affected N_2O production during non-growing season.Our results verified that the seasonal freeze-thaw cycles mitigated the available soil nitrogen and carbon limitation during spring thawing period,but simultaneously increased the gaseous N_2O-N losses at the annual time scale under field condition.The N_2O-N cumulative losses during the non-growing season amounted to 0.71 and 0.55 kg N ha^(–1) for the paddy and maize fields,respectively,and contributed to 66 and 18%of the annual total.The highest emission rates(199.2–257.4μg m^(–2) h^(–1))were observed during soil thawing for both fields,but we did not observe an emission peak during soil freezing in early winter.Although the pulses of N_2O emission in spring were short-lived(18 d),it resulted in approximately80%of the non-growing season N_2O-N loss.The N_2O burst during the spring thawing was triggered by the combined impact of high soil moisture,flush available nitrogen and carbon,and rapid recovery of microbial biomass.SEM analysis indicated that the soil moisture,available substrates including NH_4^+and dissolved organic carbon(DOC),and microbial biomass nitrogen(MBN)explained 32,36,16 and 51%of the N_2O flux variation,respectively,during the non-growing season.Our results suggested that N_2O emission during the spring thawing make a vital contribution of the annual nitrogen budget,and the vast seasonally frozen and snow-covered croplands will have high potential to exert a positive feedback on climate change considering the sensitive response of nitrogen biogeochemical cycling to the freeze-thaw disturbance.
文摘Magnetotactic bacteria(MTB)are ubiquitous prokaryotes that orient along magnetic field lines due to magnetosomes’biomineralization within the cell.These structures are ferrimagnetic organelles that impart a magnetic moment to the cell.To succeed in producing magnetosomes,MTB accumulate iron in(i)cytoplasm;(ⅱ)magnetosomes;and(ⅲ)nearby the organelle.It has already been estimated that a single MTB has an iron content of 10 to 100-fold higher than Escherichia coli.Phages are the most abundant entity in oceans and are known for controlling nutrient flow such as carbon and nitrogen by viral shunt and pump.The current work addresses the putative role of phages that infect MTB on the iron biogeochemical cycle.Can phage infection in MTB hosts cause a biogenic iron fertilization-like event in localized microenvironments?Are phages critical players in driving magnetosome biomineralization genes(BGs)horizontal transfer?Further investigation of those events,including frequency of occurrence,is necessary to fully comprehend MTB’s effect on iron cycling in aqueous environments.
基金supported by the National Natural Science Foundation of China(Grant No.41977271)the National Key Basic Research Program of China(Grant No.2020YFC1806803)。
文摘In Earth systems,thousands of terragrams(Tg)(1 Tg=10^(12) g)of mineral nanoparticles move around annually.Some mineral nanoparticles have exhibited unexpected intrinsic enzyme-like characteristics(so called“mineral nanozymes”),and are ubiquitously distributed in natural ecosystems such as the atmosphere,oceans,waters,and soils.Compared with natural enzymes,these mineral nanozymes have several advantages such as tunable catalytic efficiency and robustness to harsh conditions,e.g.,heat,acid,and alkaline conditions.As mineral nanozymes are new products of multidisciplinary cross-cutting,they have been widely applied in various fields.This review,for the first time,systematically introduces the species and properties of mineral nanozymes in Earth systems,discusses the critical roles played by nanozymes in environmental biogeochemical cycles,compiles the interfacial processes and mechanisms of mineral nanozymes,and provides an overview of the future prospects of mineral nanozymes.
基金supported by the National Key Program of Science and Technology(2022YFC3203900)the National Natural Science Foundation of China(52121006 and 92047303)supported by the Xplorer prize。
文摘River damming is believed to largely intercept nutrients,particularly retain more phosphorus(P)than nitrogen(N),and thus harm primary productivity,fishery catches,and food security downstream,which seriously constrain global hydropower development and poverty relief in undeveloped regions and can drive geo-political disputes between nations along trans-boundary rivers.In this study,we investigated whether reservoirs can instead improve nutrient regimes downstream.We measured different species of N and P as well as microbial functions in water and sediment of cascade reservoirs in the upper Mekong River over 5 years and modelled the influx and outflux of N and P species in each reservoir.Despite partially retaining total N and total P,reservoirs increased the downstream flux of ammonium and soluble reactive phosphorus(SRP).The increase in ammonium and SRP between outflux and influx showed positive linear relationships with the hydraulic residence time of the cascade reservoirs;and the ratio of SRP to dissolved inorganic nitrogen increased along the reservoir cascade.The lentic environment of reservoirs stimulated algae-mediated conversion of nitrate into ammonium in surface water;the hypoxic condition and the priming effect of algae-induced organic matter enhanced release of ammonium from sediment;the synergy of microbial phosphorylation,reductive condition and sediment geochemical properties increased release of SRP.This study is the first to provide solid evidence that hydropower reservoirs improve downstream nutrient bioavailability and N-P balance through a process of retention-transformation-transport,which may benefit primary productivity.These findings could advance our understanding of the eco-environmental impacts of river damming.
基金supported by the National Natural Science Foundation of China(Nos.41961124004,42207361,and42061124001)。
文摘Partial substitution of synthetic nitrogen(N)with organic fertilizers(PSOF)is of great significance in improving soil ecosystem functions in systems that have deteriorated due to the excessive application of chemical N fertilizer.However,existing studies typically focus on individual soil functions,neglecting the fact that multiple functions occur simultaneously.It remains unclear how PSOF influences multiple soil functions and whether these impacts are related to soil microbial communities.Here,we examined the impacts of partial substitutions(25%–50%)of chemical N fertilizer with organic form(pig manure or municipal sludge)in a vegetable field on soil multifunctionality,by measuring a range of soil functions involving primary production(vegetable yield and quality),nutrient cycling(soil enzyme activities,ammonia volatilization,N leaching,and N runoff),and climate regulation(soil organic carbon sequestration and nitrous oxide emission).We observed that PSOF improved soil multifunctionality,with a 50%substitution of chemical N fertilizer with pig manure being the best management practice;the result was strongly related to the diversities and network complexities of bacteria and fungi.Random forest analysis further revealed that soil multifunctionality was best explained by the bacterial-fungal network complexity,followed by available phosphorus level and bacterial diversity.The PSOF also shifted the composition of bacterial and fungal communities,with increased relative abundances of dominant bacteria phyla,such as Bacteroidetes,Gemmatimonadetes,and Myxococcota,and fungal phyla,such as Basidiomycota and Olpidiomycota.The observed increases in soil multifunctionality were consistent with significant increases in the relative abundances of keystone taxa such as Blastocladiomycota,Chaetomiaceae,and Nocardiopsaceae.Together,these findings indicate that PSOF can enhance interactions within and among microbial communities and that such practices have the potential to improve soil ecosystem multifunctionality and contribute to the development of sustainable agriculture.
基金supported by the National Natural Science Foundation of China(General Program,No.41972127)the National Key Research and Development Program of China(No.2021YFA0719000)。
文摘Comprehensive nitrogen biogeochemical cycle has been reconstructed for representative lacustrine organic-rich sedimentary rock in China,namely the Triassic Yanchang Formation(YF,199–230 Ma)in Ordos and the Cretaceous Qingshankou Formation(QF,86–92 Ma)in Songliao basins,by evaluating the organic and inorganic nitrogen isotopic compositions rather than only organic or bulk nitrogen isotopic compositions.The results indicate that the nitrogen isotope values of bulk rock(δ^(15)N_(bulk))in the non-metamorphic stage are significantly different from that of kerogen,which challenge the conceptual framework of sedimentary nitrogen isotope interpretation.Theδ^(15)N_(bulk)from the YF and QF were lower than their respective the nitrogen isotope values of kerogen(δ^(15)N_(ker)),with offsets up to5.1‰,which have the inverse relationship for the metamorphosed rock.Thermal evolution did not significantly modify the d15N of bulk rock and kerogen.The d15N of sediments from the YF(δ^(15)N_(bulk),1.6‰–5.6‰)were lower than that of rock from the QF(δ^(15)N_(bulk),10.2‰–15.3‰).The nitrogen isotope values of silicate incorporated nitrogen(δ^(15)N_(sil))were slightly lower than those of the d15Nker in the YF and obviously lower for the QF.The fact that different nitrogen cycles occur in the YF and QF due to the different depositional redox conditions leads to different isotopic results.The YF water environment dominated by oxic conditions is not conducive to the occurrence of denitrification and anammox,and no abundant N2 loss leads to the relatively lightδ^(15)N_(bulk).In the stratified water for the QF,redox transition zone promotes denitrification and anammox,resulting in the heavyδ^(15)N_(bulk)of rock and promotes the DNRA,resulting in heavyδ^(15)N_(ker)and lowδ^(15)N_(sil).
基金This study has been supported by NASA Carbon Monitoring System Program(NNX14AO73G)NASA IDS Program(NNX10AU06G,NNG04GM39C)U.S.National Science Foundation Grants(AGS-1243220,CNS-1059376).
文摘Greenhouse gas(GHG)-induced climate change is among the most pressing sustainability challenges facing humanity today,posing serious risks for ecosystem health.Methane(CH_(4))and nitrous oxide(N_(2)O)are the two most important GHGs after carbon dioxide(CO_(2)),but their regional and global budgets are not well known.In this study,we applied a process-based coupled biogeochemical model to concurrently estimate the magnitude and spatial and temporal patterns of CH_(4)and N_(2)O fluxes as driven by multiple environmental changes,including climate variability,rising atmospheric CO_(2),increasing nitrogen deposition,tropospheric ozone pollution,land use change,and nitrogen fertilizer use.The estimated CH_(4)and N_(2)O emissions from global land ecosystems during 1981-2010 were 144.39±12.90 Tg C/yr(mean 62 SE;1 Tg=1012 g)and 12.52±0.74 Tg N/yr,respectively.Our simulations indicated a significant(P,0.01)annually increasing trend for CH_(4)(0.43±0.06 Tg C/yr)and N_(2)O(0.14±0.02 Tg N/yr)in the study period.CH_(4)and N_(2)O emissions increased significantly in most climatic zones and continents,especially in the tropical regions and Asia.The most rapid increase in CH_(4)emission was found in natural wetlands and rice fields due to increased rice cultivation area and climate warming.N_(2)O emission increased substantially in all the biome types and the largest increase occurred in upland crops due to increasing air temperature and nitrogen fertilizer use.Clearly,the three major GHGs(CH_(4),N_(2)O,and CO_(2))should be simultaneously considered when evaluating if a policy is effective to mitigate climate change.
基金supported by the National Key R&D Plan of the Ministry of Science and Technology,China(2018YFA0903101,2018YFD0900302)the Key Program of Frontier Sciences of the Chinese Academy of Sciences(KJZD-SW-L11).
文摘Aquatic viruses are naturally present in the aquatic environment and the number of viruses is staggering.Various multicellular organisms in aquatic ecosystems may be infected,cross-species transmitted,manipulated,and killed by aquatic viruses,which can lead to cascading ecological effects.The viruses in unicellular aquatic organisms can alter interactions between host individuals,and are essential in effecting or maintaining the dynamics of aquatic microbial communities,horizontal gene transfer,biodiversity,and modulating ecological processes globally.Meanwhile,hosts also impact viral abundance and diversity.Microbial diversity drives multifunctionality in ecosystems,while viruses shape complex microbial communities and are crucial for ecosystem functioning.This review focuses on molecular,genetic,evolutionary,and ecosystemic advances related to emerging and reemerging aquatic viruses,presents the contexts,novel tools,and investigative approaches pertaining to the study of aquatic virology,and discusses the mechanisms by which viruses affect aquatic ecosystems.The paper provides an efficient and broadly-based blueprint for improving understanding of aquatic viruses.
基金supported by the National Natural Science Foundation of China(Grant Nos.41967001&41401238)State Key Laboratory of Soil and Sustainable Agriculture,Institute of Soil Science,Chinese Academy of Sciences(Grant No.Y20160001)Science and Technology Project of Guizhou Province(Grant No.Qian Ke He[2017]1209)。
文摘Iron(Fe)is an important element for the terrestrial and marine ecosystems through its biogeochemical cycling on the Earth’s surface.China has a long rice cultivation history,with extensive rice distribution across many types of paddy soils.Paddy soils are the largest anthropogenic wetlands on earth with critical roles in ecosystem functions.The periodic artificial submergence and drainage during paddy soil evolution result in significant changes in soil moisture regime and redox conditions from the natural soils,which facilitate the increase of Fe solubility and mobilization.However,there is a lack of systematic assessment on the magnitude of the migration and loss amount of Fe from paddy soils.In order to quantify the Fe loss and assess the dynamic evolution of Fe in the soils after rice cultivation,seven paddy soil chronosequences derived from different landscapes(bog,plain,terrace)and parent materials(acidic,neutral,calcareous)with cultivation history from 0 to 2,000 yr were studied.Results showed that the rates and trajectories of Fe evolution showed distinct patterns among the studied seven paddy soil chronosequences.However,net losses of Fe from 1 m soil depth occurred at all studied paddy soil chronosequences regardless of the original landscapes and parent materials.Fe in the paddy soils derived from the calcareous lacustrine sediments in the bog area showed a slight accumulation during the initial stage(50 yr)of paddy cultivation,with a loss rate of0.026 kg m^(-2)yr^(-1) during the 50-to 500-yr time period.For the paddy soils developed on the calcareous marine sediments in the plain area,Fe evolution was dominated by the internal movement in soil profiles through coupled reducing-eluviation reactions in the surface horizons and oxidation-illuviation in the subsurface horizons within 1,000 yr of paddy cultivation,with an averaged net loss rate of 0.029 kg m^(-2)yr^(-1) during the 1,000-to 2,000-yr time period of rice cultivation.In contrast,Fe in the paddy soils derived from the acidic and neutral parent materials in the plain and terraced upland areas was rapidly lost during the initial stage of paddy cultivation,with a maximum loss rate of 1.106 kg m^(-2)yr^(-1),while the Fe loss rate decreased gradually with increasing paddy cultivation age.Soil pH,CaCO_(3),and organic matter contents of the original soils,the length of time of paddy cultivation,landscape types and positions,and changes in soil moisture regime and redox condition induced by artificial submergence and drainage were the main factors controlling the rates and trajectories of Fe loss during paddy soils evolution.The amount of Fe loss caused by rice cultivation at the national scale was estimated based on the data collected from this study and the literature.The Fe loss fluxes of paddy soils in China were about 46.4–195.7 Tg yr^(-1),and the amounts of Fe losses from paddy fields nationwide were about 5,121.5–9,412.2 Tg.Quantifying Fe loss from paddy fields is important to scientifically assess the impact of paddy cultivation on the Fe biogeochemical cycle.
基金The Major Science and Technology Program for Water Pollution Control and Treatment,No.2017ZX07101-001National Natural Science Foundation of China,No.41922003,No.41871080。
文摘The magnitude of mass flux is closely associated with biogeochemical watershed processes,which can generate a considerable amount of pertinent information.Moreover,both the accuracy and precision of mass flux estimation results directly affects the perception of the ecological environmental status,which in turn affects both the formulation and implementation of river basin management planning.In practical applications,the true value of flux is unknown and can only be estimated.Flux results obtained using different monitoring and estimation methods also differ significantly.However,in existing studies on mass flux associated with biogeochemical watershed interfaces,the application of monitoring and estimation methods lacks uniform criteria or references.Accordingly,this study summarizes and deconstructs results from recent studies on biogeochemical watershed interface processes and compares the advantages,disadvantages and applicability of the monitoring and estimation methods used by these studies.This particular study is intended to be used as a reference for the selection of flux calculation methods.
基金financially supported by the National Natural Science Foundation of China(Grant No.31600411)High Quality Food Microbiology Curriculum of Shanxi Normal University(Grant No.2017YZKC-24).
文摘Graphene-based nanomaterials(GBNs)are likely to be entering the soil environment in increasing amounts via consumer products.However,the disturbance of bacterial communities and their associated ecological functions by GBNs remains elusive.We performed a soil incubation experiment with the addition of graphene oxide(GO)and reduced graphene oxide(RGO).The Illumina sequencing technique was used to investigate changes in bacterial communities,and the functional groups of the communities were analyzed using the functional annotation of prokaryotic taxa database.After 90 days of exposure,RGO induced a lower bacterial richness than GO.However,GO induced larger changes in community composition and functions than RGO.After exposure to GBNs,some of the functional groups associated with organic matter degradation and biogeochemical cycling of nitrogen and sulfur decreased.However,the functional group associated with aromatic compound degradation increased,possibly because GBNs contain rich aromatic hydrocarbon structures,which are tolerated by this functional group.
基金This work was supported by the National Key R&D Program of China(No.2018YFC0310701)the Chinese National Natural Science Foundation(No.91951201)+1 种基金the Scientific Research Foundation of Third Institute of Oceanography,MNR(No.2017003)the Sino-French LIA/IRP 1211 MicrobSea.
文摘With a rich variety of chemical energy sources and steep physical and chemical gradients,hydrothermal vent systems offer a range of habitats to support microbial life.Cultivation-dependent and independent studies have led to an emerging view that diverse microorganisms in deep-sea hydrothermal vents live their chemolithoautotrophic,heterotrophic,or mixotrophic life with versatile metabolic strategies.Biogeochemical processes are mediated by microorganisms,and notably,processes involving or coupling the carbon,sulfur,hydrogen,nitrogen,and metal cycles in these unique ecosystems.Here,we review the taxonomic and physiological diversity of microbial prokaryotic life from cosmopolitan to endemic taxa and emphasize their significant roles in the biogeochemical processes in deep-sea hydrothermal vents.According to the physiology of the targeted taxa and their needs inferred from meta-omics data,the media for selective cultivation can be designed with a wide range of physicochemical conditions such as temperature,pH,hydrostatic pressure,electron donors and acceptors,carbon sources,nitrogen sources,and growth factors.The application of novel cultivation techniques with real-time monitoring of microbial diversity and metabolic substrates and products are also recommended.
