Soil microorganisms play critical roles in ecosystem function.However,the relative impact of the potassium(K)fertilizer gradient on the microbial community in wheat-maize double-cropping systems remains unclear.In thi...Soil microorganisms play critical roles in ecosystem function.However,the relative impact of the potassium(K)fertilizer gradient on the microbial community in wheat-maize double-cropping systems remains unclear.In this long-term field experiment(2008-2019),we researched bacterial and fungal diversity,composition,and community assemblage in the soil along a K fertilizer gradient in the wheat season(K0,no K fertilizer;K1,45 kg ha^(-1) K_(2)O;K_(2),90 kg ha^(-1)K_(2)O;K3,135 kg ha^(-1)K_(2)O)and in the maize season(K0,no K fertilizer;K_(1),150 kg ha^(-1) K_(2)O;K_(2),300 kg ha^(-1)K_(2)O;K_(3),450 kg ha^(-1)K_(2)O)using bacterial 16S rRNA and fungal internally transcribed spacer(ITS)data.We observed that environmental variables,such as mean annual soil temperature(MAT)and precipitation,available K,ammonium,nitrate,and organic matter,impacted the soil bacterial and fungal communities,and their impacts varied with fertilizer treatments and crop species.Furthermore,the relative abundance of bacteria involved in soil nutrient transformation(phylum Actinobacteria and class Alphaproteobacteria)in the wheat season was significantly increased compared to the maize season,and the optimal K fertilizer dosage(K2 treatment)boosted the relative bacterial abundance of soil nutrient transformation(genus Lactobacillus)and soil denitrification(phylum Proteobacteria)bacteria in the wheat season.The abundance of the soil bacterial community promoting root growth and nutrient absorption(genus Herbaspirillum)in the maize season was improved compared to the wheat season,and the K2 treatment enhanced the bacterial abundance of soil nutrient transformation(genus MND1)and soil nitrogen cycling(genus Nitrospira)genera in the maize season.The results indicated that the bacterial and fungal communities in the double-cropping system exhibited variable sensitivities and assembly mechanisms along a K fertilizer gradient,and microhabitats explained the largest amount of the variation in crop yields,and improved wheat?maize yields by 11.2-22.6 and 9.2-23.8%with K addition,respectively.These modes are shaped contemporaneously by the different meteorological factors and soil nutrient changes in the K fertilizer gradients.展开更多
Soil soluble organic matter is an important component in the study of carbon and nitrogen cycling in terrestrial ecosystems. Soil microorganisms, as soil decomposers, participate in soil biogeochemical processes and p...Soil soluble organic matter is an important component in the study of carbon and nitrogen cycling in terrestrial ecosystems. Soil microorganisms, as soil decomposers, participate in soil biogeochemical processes and play an important role in maintaining the balance of soil ecosystems. As a typical subtropical regional unit, Queensland, Australia, is a relatively concentrated distribution area of forests in Australia. It is very sensitive to climate change and plays an important role in Australian climate and even global climate change. Its unique natural environment and ecosystem occupy a special position in the world. However, the knowledge of available carbon and nitrogen pool and microbial activity in forest soil is still very limited. Pinus elliottii, Araucaria cunninghamii and Agathis australis are the three most important forest types in southern Queensland, Australia. In our research, the function and structural diversity of soil microbial communities of these three forest types were studied using biochemical and molecular biological methods, and the effective carbon and nitrogen pools of soil of different forest types and related microbial processes were discussed, which has important theoretical guiding significance for further research on the structure and function of soil ecosystem. The number of PLFAs in the soil of P. elliottii was 45, the number of PLFAs in the soil of Araucaria cunninghamii and Agathis australis was 39 and 35, respectively. The number and content of PLFAs monomer in P. elliottii were higher than those in the other two kinds of forest soil.展开更多
The soybean rhizosphere has a specific microbial community,but the differences in microbial community structure between different soybean genotypes have not been explained.The present study analyzed the structure of t...The soybean rhizosphere has a specific microbial community,but the differences in microbial community structure between different soybean genotypes have not been explained.The present study analyzed the structure of the rhizosphere microbial community in three soybean genotypes.Differences in rhizosphere microbial communities between different soybean genotypes were verified using diversity testing and community composition,and each genotype had a specific rhizosphere microbial community composition.Co-occurrence network analysis found that different genotype plant hosts had different rhizosphere microbial networks.The relationship between rhizobia and rhizosphere microorganisms in the network also exhibited significant differences between different genotype plant hosts.The ecological function prediction found that different genotypes of soybean recruited the specific rhizosphere microbial community.These results demonstrated that soybean genotype regulated rhizosphere microbial community structure differences.The study provides a reference and theoretical support for developing soybean microbial inoculum in the future.展开更多
This study attempted to monitor the development of microbial communities and reveal the correlation between the soil microbial community and soil nutrient factors over different years following the replanting of peach...This study attempted to monitor the development of microbial communities and reveal the correlation between the soil microbial community and soil nutrient factors over different years following the replanting of peach trees.The replanted soil(RS)and nonreplanted soil(NRS)were collected from peach orchards with different growth years(1,3,5,7,9,11,and 13 years)in the same region.The soil bacterial and fungal community diversities were analyzed by high-throughput sequencing technology.Redundancy analysis(RDA)was used to show the correlation between the soil microbial community and environmental variables.The alpha diversities of the bacterial and fungal communities indicated that RS contained a higher abundance of bacterial and fungal operational taxonomic units(OTUs)than NRS.NMDS and ANOSIM analyses showed that the soil bacterial and fungal communities were significantly(P<0.01)affected by planting years,and that the main changes occurred in the first and ninth planting years.The presence of the bacterial orders Sphingobacteriales,Burkholderiales and Actinomycetales changed significantly after replanting.Some bacteria associated with bioremediation,such as Burkholderiales and Intrasporangiaceae,and some harmful pathogens,such as Penicillium and Ophiostomatales,significantly increased after replanting(LDA score>3.0).In addition,the soil nutrient contents were lower in RS than in NRS in the early stage(1–5 years),and the RDA showed that bacterial and fungal phyla are closely associated with environmental variables,including the potential of hydrogen(pH),ammonium nitrogen(AN),available phosphorus(AP)and available potassium(AK).These results lead to a deeper understanding of the microbial responses to replanting in peach orchards.展开更多
Microorganisms regulate the responses of terrestrial ecosystems to anthropogenic nutrient inputs.The escalation of anthropogenic activities has resulted in a rise in the primary terrestrial constraining elements,namel...Microorganisms regulate the responses of terrestrial ecosystems to anthropogenic nutrient inputs.The escalation of anthropogenic activities has resulted in a rise in the primary terrestrial constraining elements,namely nitrogen(N)and phosphorus(P).Nevertheless,the specific mechanisms governing the influence of soil microbial community structure and ecological processes in ecologically vulnerable and delicate semi-arid loess agroecosystems remain inadequately understood.Therefore,we explored the effects of different N and P additions on soil microbial community structure and its associated ecological processes in the farmland of Chinese Loess Plateau based on a 36-a long-term experiment.Nine fertilization treatments with complete interactions of high,medium,and low N and P gradients were set up.Soil physical and chemical properties,along with the microbial community structure were measured in this study.Additionally,relevant ecological processes such as microbial biomass,respiration,N mineralization,and enzyme activity were quantified.To elucidate the relationships between these variables,we examined correlation-mediated processes using statistical techniques,including redundancy analysis(RDA)and structural equation modeling(SEM).The results showed that the addition of N alone had a detrimental effect on soil microbial biomass,mineralized N accumulation,andβ-1,4-glucosidase activity.Conversely,the addition of P exhibited an opposing effect,leading to positive influences on these soil parameters.The interactive addition of N and P significantly changed the microbial community structure,increasing microbial activity(microbial biomass and soil respiration),but decreasing the accumulation of mineralized N.Among them,N24P12 treatment showed the greatest increase in the soil nutrient content and respiration.N12P12 treatment increased the overall enzyme activity and total phospholipid fatty acid(PLFA)content by 70.93%.N and P nutrient contents of the soil dominate the microbial community structure and the corresponding changes in hydrolytic enzymes.Soil microbial biomass,respiration,and overall enzyme activity are driven by mineralized N.Our study provides a theoretical basis for exploring energy conversion processes of soil microbial community and environmental sustainability under long-term N and P additions in semi-arid loess areas.展开更多
To evaluate soil environmental quality of introduced new crops and other traditional crops,and to understand the importance of response of soil microbial community to heavy metal stress,rhizosphere soil samples of dif...To evaluate soil environmental quality of introduced new crops and other traditional crops,and to understand the importance of response of soil microbial community to heavy metal stress,rhizosphere soil samples of different land use types(Sphagnum farming,rice field,grassland and bare land) in Dading Village,Duyun City,Guizhou Province of China were selected as research objects.The differences of soil chemical properties,heavy metal concentration and microbial community among different land use types were compared.The abundance and structural diversity of microbial communities in soil samples were analyzed by 16S rDNA sequencing,the relationship between soil pollution characteristics and microbial community in farmland was studied.The results showed that the different land use types planting different agricultural products under the same growing environment were subject to different heavy metal pollution.Soil chemical properties and heavy metals had significant effects on the soil microbial community.Proteobacteria,Actinobacteriota and Acidobacteriota were the most dominant groups of bacteria.The soil microorganisms responded more actively to the variability of pH,SOM and AK contents,although the variability was not high.With the increase of pH value,the abundance of the dominant species Proteobacteria also increased.Verrucomicrobiota had a better tolerance to the heavy metal Hg.Verrucomicrobiota and Firmicutes had strong resistance to the heavy metal Cd.These results deepen our understanding of the changes and aggregation of microorganisms under different land use patterns in heavy-metal contaminated farmland soils.展开更多
Chinese hickory(Carya cathayensis Sarg.)is an important economic forest in Southeastern China.A large amount of hickory husk waste is generated every year but with a low proportion of returning.Meanwhile,intensive man...Chinese hickory(Carya cathayensis Sarg.)is an important economic forest in Southeastern China.A large amount of hickory husk waste is generated every year but with a low proportion of returning.Meanwhile,intensive management has resulted in soil degradation of Chinese hickory plantations.This study aims to investigate the effects of three Chinese hickory husk returning modes on soil amendment,including soil acidity,soil nutrition,and microbial community.The field experiment carried out four treatments:control(CK),hickory husk mulching(HM),hickory husk biochar(BC),and hickory husk organic fertilizer(OF).The phospholipid fatty acid(PLFA)biomarker method was employed to determine the soil microbial community.After one year of treatment,the results showed that:(i)HM and BC significantly increased soil pH by 0.33 and 1.71 units,respectively;(ii)HM,BC and OF treatments significantly increased the soil organic carbon,alkaline nitrogen,available phosphorous,and available potassium.The OF treatment demonstrated the most significant improvement in the soil nutrient;(iii)The soil microbial biomass significantly increased in the HM,BC and OF treatments,and all microbial groups showed an increasing trend.HM treatment increased the fungal/bacterial ratio(F/B).The OF treatment significantly decreased the Shannon-Wiener diversity(H’)and evenness index(J)of the microbial community(P<0.05).Considering the treatments effects,costs,and ease of operation,our recommended returning modes of Chinese hickory husk are mulching and organic fertilizer produced by composting with manure.展开更多
To reveal the response mechanism of soil microbial community in different planting systems of sweet potato,the effects of rotation and intercropping on microbial community structure and carbon source utilization capac...To reveal the response mechanism of soil microbial community in different planting systems of sweet potato,the effects of rotation and intercropping on microbial community structure and carbon source utilization capacities of sweet potato rhizosphere soil were studied by using phospholipid fatty acid(PLFA)and ecological board(BIOLOG ECO)through field positioning experiments.In this study,three treatments were sweet potato continuous cropping,sweet potato-wheat rotation,and sweet potato-corn intercropping.The main results showed that compared with the sweet potato continuous cropping treatment,sweet potato rotation and intercropping changed the PLFA biomass of soil microorganisms;the contents of bacteria increased by 21.82%and 38.77%,respectively(P<0.05);the contents of actinomycetes increased by 6.98%and 12.77%,and the biomass of Gram-positive bacteria increased by 28.60%and 63.44%,respectively;and the biomass of Gram-negative bacteria increased by 18.21%and 22.29%,and the fungal contents decreased by 16.60%and 13.03%,respectively.With the extension of culture time,the average well color development(AWCD value)of sweet potato-corn intercropping was significantly higher than other two treatments.The utilization capacities of carboxylic acid compounds,polymers,carbohydrates,amino acids,and amines in the sweet potato-corn intercropping treatment were significantly increased by 17.28%,14.67%,54.17%,36.62%,and 20.00%,respectively,compared with the sweet potato continuous cropping treatment.The results of the multivariate analysis(RDA)showed that the changes of soil microbial community structure and functional diversity were controlled by many factors,and the soil available potassium and total nitrogen were the main driving factors.However,sweet potato-wheat rotation and sweet potato-corn intercropping could optimize the soil microbial community structure and enhance the microbial functional diversity,and the effect of sweet potato-corn intercropping treatment was better.展开更多
[Objectives]This study was conducted to reveal the effects of bamboo charcoal-based biochar(or bamboo charcoal for short)on soil enzyme activity and microbial community structure.[Methods]The field experiment was carr...[Objectives]This study was conducted to reveal the effects of bamboo charcoal-based biochar(or bamboo charcoal for short)on soil enzyme activity and microbial community structure.[Methods]The field experiment was carried out at the Modern Agriculture Demonstration Base of Gaoping Village,Gaoping Town,Suichang County,Zhejiang Province.Bamboo charcoal was applied at four different levels:T_(0)(no bamboo charcoal),T_(1)(1125 kg/hm^(2)bamboo charcoal),T_(2)(2250 kg/hm^(2)bamboo charcoal)and T_(3)(3375 kg/hm^(2)bamboo charcoal).Soil physicochemical properties and enzyme activities in different treatments were measured.[Results]The soil fungal,bacterial and actinomycete populations increased significantly in the soils surrounding capsicum roots.The bacterial population,fungal population and fungus/bacterium ratio peaked in Treatment T_(2),up to 7.32×10^(6)cfu/g,2.65×10^(4)cfu/g and 0.36×10^(-2),respectively.The effect of bamboo charcoal in promotingβ-glucoside,catalase,acid phosphatase and sucrase activities was T_(2)>T_(3)>T_(1)>T_(0).With bamboo charcoal increasing,the bacterium population,fungus population,fungus/bacterium ratio,β-glucoside,catalase,acid phosphatase and sucrase activities all increased at first and then decreased.T_(2)treatment showed the best effects in improving soil physicochemical properties and microbial community structure.[Conclusions]Bamboo charcoal significantly improves soil enzyme activity and increases soil microbial population,and thus has important positive effects on the soil ecosystem.展开更多
[Objective] The objective of this study was to investigate the effects of different agricultural managements on soil microbial population,activity,functional diversity and soil enzyme activity in continuous mono-cropp...[Objective] The objective of this study was to investigate the effects of different agricultural managements on soil microbial population,activity,functional diversity and soil enzyme activity in continuous mono-cropping field of strawberry.[Method]A field plot experiment was carried out to evaluate characteristics of soil microbial community by soil enzyme analysis,microbial cultivation and Biolog analysis.[Result]The results showed that bacteria population proportion,the ration of bacteria to fungi,microorganism amount,AWCD,soil dehydrogenase activity,the Shannon,Simpson,and Mcintosh indices of soil microbial communities were obviously increased under strawberry-rice rotation,soil solarization with rice bran,and calcium cyanamide（CaCN2）treatments,in addition,soil urease activity was significantly increased under strawberry-rice rotation and soil solarization with rice bran treatment,when compared with no fertilization.When compared with conventional fertilization treatment,strawberry-rice rotation and soil solarization with rice bran both significantly increased AWCD and Mcintosh index of soil microbial communities,meanwhile respectively increased soil urease and dehydrogenase activity.PCA analyses suggested that carbon utilization of soil microbial communities under strawberry-rice rotation,soil solarization with rice bran,and calcium cyanamide treatment was obviously different from that of conventional fertilization and no fertilization treatment.[Conclusion] strawberry-rice rotation and soil solarization with rice bran were effective agricultural managements to control soil biological degradation under Continuous Cropped Strawberry.展开更多
To screen the high efficient mixed culture and understand the bioleaching behaviors of mixed culture for low-grade copper sulfide ore bioleaching,ten mixed cultures were collected and screened from different acid mine...To screen the high efficient mixed culture and understand the bioleaching behaviors of mixed culture for low-grade copper sulfide ore bioleaching,ten mixed cultures were collected and screened from different acid mine drainages obtained from sulfide mines of China.The leaching rate was set as criterion to screen the mixed culture and the metagenomic approach.Community genome array（CGA） was used for analyzing the mixed culture microbial community shift during the bioleaching process.The results indicate that the mixed culture obtained from Yinshan（YS） lead-zinc mine in Dexing of Jiangxi province in China reaches the maximum copper extraction（68.89%） during the one bioleaching period of 24 d.CGA results show that YS culture contains nine kinds of bacteria which are belong to six divisions,and the microbial community structure is changing during the bioleaching process.This provides a good way to accelerate the bioleaching process and reveals the microbial community shift during the bioleaching process.展开更多
The variation of microbial community structure was investigated for the tank bioleaching process of Pb-Zn-Sn chalcopyrite concentrate in the presence of mixed moderately thermophilic bacteria. The parameters, such as ...The variation of microbial community structure was investigated for the tank bioleaching process of Pb-Zn-Sn chalcopyrite concentrate in the presence of mixed moderately thermophilic bacteria. The parameters, such as pH value, solution potential and concentrations of metal ions, were determined by the method of polymerase chain reaction-restriction fragment length polymorphism （PCR-RFLP） to analyze the succession of microbial community. The results showed that a final copper extraction rate of 85.6% could be obtained after tank bioleaching for 30 d. The Acidithiobacillus caldus was the dominant population with abundance of about 73.80%in the initial stage, then Sulfobacillus thermosulfidooxidans dominated from the 18th day to the end of bioleaching, while the abundance of Leptospirillum ferriphilum changed slightly. A higher solution potential within a certain range and appropriate concentration of ferric ions were essential for this tank bioleaching of chalcopyrite.展开更多
As one of the main methods of microbial community functional diversity measurement, biolog method was favored by many researchers for its simple oper- ation, high sensitivity, strong resolution and rich data. But the ...As one of the main methods of microbial community functional diversity measurement, biolog method was favored by many researchers for its simple oper- ation, high sensitivity, strong resolution and rich data. But the preprocessing meth- ods reported in the literatures were not the same. In order to screen the best pre- processing method, this paper took three typical treatments to explore the effect of different preprocessing methods on soil microbial community functional diversity. The results showed that, method B＇s overall trend of AWCD values was better than A and C＇s. Method B＇s microbial utilization of six carbon sources was higher, and the result was relatively stable. The Simpson index, Shannon richness index and Car- bon source utilization richness index of the two treatments were B〉C〉A, while the Mclntosh index and Shannon evenness were not very stable, but the difference of variance analysis was not significant, and the method B was always with a smallest variance. Method B＇s principal component analysis was better than A and C＇s. In a word, the method using 250 r/min shaking for 30 minutes and cultivating at 28 ℃ was the best one, because it was simple, convenient, and with good repeatability.展开更多
Through laboratory simulation, the influence of cadmium on soil respiratory intensity and microbial community were studied by adding different concentrations of heavy metal cadmium. The results indicated that, the soi...Through laboratory simulation, the influence of cadmium on soil respiratory intensity and microbial community were studied by adding different concentrations of heavy metal cadmium. The results indicated that, the soil respiration had a signifi- cant weakening trend in the same culture days with increasing exogenous cadmium content; the soil respiration intensity was decreased obviously with the increase of culture time, especially after 14 d when the soil exogenous cadmium content was in the range of 0.5-3.0 mg/kg, while the soil respiration had not obvious variation over time when the exogenous cadmium content was in the range of 5.0-10.0 mg/kg. The soil microbial communities decreased significantly and were much lower than that of the control treatment in the same culture days with the increasing of soil exogenous cadmium content; the soil microbial community declined significantly with increasing of culture time for all exogenous cadmium treatments. The number of soil microbial communities in treatment with 10 mg/kg of exogenous cadmium were only 46.43%, 32.26%, 28.74%, 27.39% and 24.62% of that in control treatment on the 7th, 14th, 21st, 28th and 42rd of culture, respectively. It indicated that higher concen- tration of cadmium in dark brown soil had a significant inhibitory effect on soil mi- crobial growth.展开更多
[Objective] The aim was to evaluate the feasibility of biotechnology fulvic acid produced by microbial community LCM9 by the use of corn straws as substrate and its application effect.[Method]Microbial community was o...[Objective] The aim was to evaluate the feasibility of biotechnology fulvic acid produced by microbial community LCM9 by the use of corn straws as substrate and its application effect.[Method]Microbial community was obtained from the nature samples,and corn straws were used as fermentation substrate.The yield of biotechnology fulvic acid and its application effect was evaluated.[Result]The yield of biotechnology fulvic acid was up to 15.7% when the water content was 75.0% and fermented after 7 d using corn straws as the only source of nutrition.After 500 mg/kg of biotechnology fulvic acid was added for 5 d,the root length and bud length could be increased by 59.1% and 97.1%,respectively.[Conclusion]A higher yield of biotechnology fulvic acid could be obtained by the method in this experiment and the product could enhance the growth of wheat seedlings.展开更多
Biolog, 16S rRNA gene denaturing gradient gel electrophoresis （DGGE）, and phospholipid fatty acid （PLFA） analyses were used to assess soil microbial community characteristics in a chronosequence of tea garden syst...Biolog, 16S rRNA gene denaturing gradient gel electrophoresis （DGGE）, and phospholipid fatty acid （PLFA） analyses were used to assess soil microbial community characteristics in a chronosequence of tea garden systems （8-, 50-, and 90- year-old tea gardens）, an adjacent wasteland, and a 90-year-old forest. Biolog analysis showed that the average well color development （AWCD） of all carbon sources and the functional diversity based on the Shannon index decreased （P 〈 0.05） in the following order： wasteland 〉 forest 〉 tea garden. For the DCCE analysis, the genetic diversity based on the Shannon index was significantly lower in the tea garden soils than in the wasteland. However, compared to the 90-year-old forest, the tea garden soils showed significantly higher genetic diversity. PLFA analysis showed that the ratio of Gram positive bacteria to Cram negative bacteria was significantly higher in the tea garden soils than in the wasteland, and the highest value was found in the 90-year-old forest. Both the fungal PLFA and the ratio of fungi to bacteria were significantly higher in the three tea garden soils than in the wasteland and forest, indicating that fungal PLFA was significantly affected by land-use change. Based on cluster analysis of the soil microbial community structure, all three analytical methods showed that land-use change had a greater effect on soil microbial community structure than tea garden age.展开更多
The microbial community composition in wheat rhizosphere was analyzed by detecting colony forming units （CFUs） in agar plates. The total CFUs in rhizosphere were 1.04×10^9/g soil with 9.0×10^8/g bacteria, ...The microbial community composition in wheat rhizosphere was analyzed by detecting colony forming units （CFUs） in agar plates. The total CFUs in rhizosphere were 1.04×10^9/g soil with 9.0×10^8/g bacteria, 1.37×10^8/g actinomyces and 3.6×10^6/g fungi. The 10 dominant bacteria were isolated from wheat rhizosphere and were grouped into genus Bacillus according to their full length 16S rRNA gene sequences. Although belonging to the same genus, the isolated strains exhibited different sensitivities to oxytetracycline. When a series of the rhizosphere soil was exposed under various concentrations of oxytetracycline, the microbial community structure was highly affected with significant decline of CFUs of bacteria and actinomyces （22.2% and 31.7% at 10 mg/kg antibiotic, respectively）. This inhibition was clearly enhanced with the increase exposure dosage of antibiotic and could not be eliminated during 30 d incubation. There was no obvious influence of this treatment on fungi population. Among the four soil enzymes （alkaline phosphatase, acidic phosphatase, dehydrogenase and urease）, only alkaline phospbatase was sensitive to oxytetracycline exposure with 41.3% decline of the enzyme activity at 10 mg/kg antibiotic and further decrease of 64.3%-80.8% when the dosage over 30 mg/kg.展开更多
This study focused on the changes of soil microbial diversity and potential inhibitory effects of heavy metals on soil enzymatic activities at different application rates of Cd and/or Pb. The soil used for experiments...This study focused on the changes of soil microbial diversity and potential inhibitory effects of heavy metals on soil enzymatic activities at different application rates of Cd and/or Pb. The soil used for experiments was collected from Beijing and classified as endoaquepts. Pots containing 500 g of the soil with different Cd and/or Pb application rates were incubated for a period of 0, 2, 9, 12 weeks in a glasshouse and the soil samples were analyzed for individual enzymes, including catalase, alkaline phosphatase and dehydrogenase, and the changes of microbial community structure. Results showed that heavy metals slightly inhibited the enzymatic activities in all the samples spiked with heavy metals. The extent of inhibition increased significantly with increasing level of heavy metals, and varied with the incubation periods. The soil bacterial community structure, as determined by polymerase chain reaction- denaturing gradient gel electrophoresis techniques, was different in the contaminated samples as compared to the control. The highest community change was observed in the samples amended with high level of Cd. Positive correlations were observed among the three enzymatic activities, but negative correlations were found between the amounts of the heavy metals and the enzymatic activities.展开更多
Using a scheme of agricultural fields with progressively less intensive management (deintensification), different manage- ment practices in six agroecosystems located near Goldsboro, NC, USA were tested in a large-sca...Using a scheme of agricultural fields with progressively less intensive management (deintensification), different manage- ment practices in six agroecosystems located near Goldsboro, NC, USA were tested in a large-scale experiment, including two cash-grain cropping systems employing either tillage (CT) or no-tillage (NT), an organic farming system (OR), an integrated cropping system with animals (IN), a successional field (SU), and a plantation woodlot (WO). Microbial phos- pholipid fatty acid (PLFA) profiles and substrate utilization patterns (BIOLOG ECO plates) were measured to examine the effects of deintensification on the structure and diversity of soil microbial communities. Principle component analyses of PLFA and BIOLOG data showed that the microbial community structure diverged among the soils of the six systems. Lower microbial diversity was found in lowly managed ecosystem than that in intensive and moderately managed agro- ecosystems, and both fungal contribution to the total identified PLFAs and the ratio of microbial biomass C/N increased along with agricultural deintensification. Significantly higher ratios of C/N (P < 0.05) were found in the WO and SU systems, and for fungal/bacterial PLFAs in the WO system (P < 0.05). There were also significant decreases (P < 0.05) along with agricultural deintensification for contributions of total bacterial and gram positive (G+) bacterial PLFAs. Agricultural deintensification could facilitate the development of microbial communities that favor soil fungi over bacteria.展开更多
Cucumber (Cucumis sativus) is one of the most widely used vegetable in the world,and different pesticides have been extensively used for controlling the insects and disease pathogens of this plant.However,little is kn...Cucumber (Cucumis sativus) is one of the most widely used vegetable in the world,and different pesticides have been extensively used for controlling the insects and disease pathogens of this plant.However,little is known about how the pesticides affect the microbial community in cucumber phyllosphere.This study was the first attempt to assess the impact of pyrethroid insecticide cyperemethrin on the microbial communities of cucumber phyllosphere using biochemical and genetic approaches.Phospholipid fatty ac...展开更多
基金funded by the National Key Research and Development Program of China(2023YFD150050504)the Key Research and Development Program of Shandong Province,China(2022SFGC0301)the Strategic Priority Research Program of the Chinese Academy of Sciences-Development and Application Technology of Special Package Fertilizer for Improving Albic Soil(XDA28100203)。
文摘Soil microorganisms play critical roles in ecosystem function.However,the relative impact of the potassium(K)fertilizer gradient on the microbial community in wheat-maize double-cropping systems remains unclear.In this long-term field experiment(2008-2019),we researched bacterial and fungal diversity,composition,and community assemblage in the soil along a K fertilizer gradient in the wheat season(K0,no K fertilizer;K1,45 kg ha^(-1) K_(2)O;K_(2),90 kg ha^(-1)K_(2)O;K3,135 kg ha^(-1)K_(2)O)and in the maize season(K0,no K fertilizer;K_(1),150 kg ha^(-1) K_(2)O;K_(2),300 kg ha^(-1)K_(2)O;K_(3),450 kg ha^(-1)K_(2)O)using bacterial 16S rRNA and fungal internally transcribed spacer(ITS)data.We observed that environmental variables,such as mean annual soil temperature(MAT)and precipitation,available K,ammonium,nitrate,and organic matter,impacted the soil bacterial and fungal communities,and their impacts varied with fertilizer treatments and crop species.Furthermore,the relative abundance of bacteria involved in soil nutrient transformation(phylum Actinobacteria and class Alphaproteobacteria)in the wheat season was significantly increased compared to the maize season,and the optimal K fertilizer dosage(K2 treatment)boosted the relative bacterial abundance of soil nutrient transformation(genus Lactobacillus)and soil denitrification(phylum Proteobacteria)bacteria in the wheat season.The abundance of the soil bacterial community promoting root growth and nutrient absorption(genus Herbaspirillum)in the maize season was improved compared to the wheat season,and the K2 treatment enhanced the bacterial abundance of soil nutrient transformation(genus MND1)and soil nitrogen cycling(genus Nitrospira)genera in the maize season.The results indicated that the bacterial and fungal communities in the double-cropping system exhibited variable sensitivities and assembly mechanisms along a K fertilizer gradient,and microhabitats explained the largest amount of the variation in crop yields,and improved wheat?maize yields by 11.2-22.6 and 9.2-23.8%with K addition,respectively.These modes are shaped contemporaneously by the different meteorological factors and soil nutrient changes in the K fertilizer gradients.
文摘Soil soluble organic matter is an important component in the study of carbon and nitrogen cycling in terrestrial ecosystems. Soil microorganisms, as soil decomposers, participate in soil biogeochemical processes and play an important role in maintaining the balance of soil ecosystems. As a typical subtropical regional unit, Queensland, Australia, is a relatively concentrated distribution area of forests in Australia. It is very sensitive to climate change and plays an important role in Australian climate and even global climate change. Its unique natural environment and ecosystem occupy a special position in the world. However, the knowledge of available carbon and nitrogen pool and microbial activity in forest soil is still very limited. Pinus elliottii, Araucaria cunninghamii and Agathis australis are the three most important forest types in southern Queensland, Australia. In our research, the function and structural diversity of soil microbial communities of these three forest types were studied using biochemical and molecular biological methods, and the effective carbon and nitrogen pools of soil of different forest types and related microbial processes were discussed, which has important theoretical guiding significance for further research on the structure and function of soil ecosystem. The number of PLFAs in the soil of P. elliottii was 45, the number of PLFAs in the soil of Araucaria cunninghamii and Agathis australis was 39 and 35, respectively. The number and content of PLFAs monomer in P. elliottii were higher than those in the other two kinds of forest soil.
基金funded by the Key Research and Development Projects of Heilongjiang Province, China (GA21B007 and GZ20210014)the Basic Research Fees of Universities in Heilongjiang Province, China (135409103)。
文摘The soybean rhizosphere has a specific microbial community,but the differences in microbial community structure between different soybean genotypes have not been explained.The present study analyzed the structure of the rhizosphere microbial community in three soybean genotypes.Differences in rhizosphere microbial communities between different soybean genotypes were verified using diversity testing and community composition,and each genotype had a specific rhizosphere microbial community composition.Co-occurrence network analysis found that different genotype plant hosts had different rhizosphere microbial networks.The relationship between rhizobia and rhizosphere microorganisms in the network also exhibited significant differences between different genotype plant hosts.The ecological function prediction found that different genotypes of soybean recruited the specific rhizosphere microbial community.These results demonstrated that soybean genotype regulated rhizosphere microbial community structure differences.The study provides a reference and theoretical support for developing soybean microbial inoculum in the future.
基金supported by the National Science and Technology Support Program of China(2014BAD20B01 and 2014BAD16B07)the National Key R&D Program of China(2019YFE0120400)the Agricultural Scientific and Technological Innovation Project of Shandong Academy of Agricultural Sciences,China(CXGC2021B13 and CXGC2022D06)。
文摘This study attempted to monitor the development of microbial communities and reveal the correlation between the soil microbial community and soil nutrient factors over different years following the replanting of peach trees.The replanted soil(RS)and nonreplanted soil(NRS)were collected from peach orchards with different growth years(1,3,5,7,9,11,and 13 years)in the same region.The soil bacterial and fungal community diversities were analyzed by high-throughput sequencing technology.Redundancy analysis(RDA)was used to show the correlation between the soil microbial community and environmental variables.The alpha diversities of the bacterial and fungal communities indicated that RS contained a higher abundance of bacterial and fungal operational taxonomic units(OTUs)than NRS.NMDS and ANOSIM analyses showed that the soil bacterial and fungal communities were significantly(P<0.01)affected by planting years,and that the main changes occurred in the first and ninth planting years.The presence of the bacterial orders Sphingobacteriales,Burkholderiales and Actinomycetales changed significantly after replanting.Some bacteria associated with bioremediation,such as Burkholderiales and Intrasporangiaceae,and some harmful pathogens,such as Penicillium and Ophiostomatales,significantly increased after replanting(LDA score>3.0).In addition,the soil nutrient contents were lower in RS than in NRS in the early stage(1–5 years),and the RDA showed that bacterial and fungal phyla are closely associated with environmental variables,including the potential of hydrogen(pH),ammonium nitrogen(AN),available phosphorus(AP)and available potassium(AK).These results lead to a deeper understanding of the microbial responses to replanting in peach orchards.
基金funded by the Project of Science and Technology Department of Shaanxi Province,China(2022NY-074)the National Natural Science Foundation of China(41501255)+1 种基金the Xi'an Science and Technology Project(21NYYF0033)the Fundamental Research Funds for the Central Universities(SYJS202224,GK202206032).
文摘Microorganisms regulate the responses of terrestrial ecosystems to anthropogenic nutrient inputs.The escalation of anthropogenic activities has resulted in a rise in the primary terrestrial constraining elements,namely nitrogen(N)and phosphorus(P).Nevertheless,the specific mechanisms governing the influence of soil microbial community structure and ecological processes in ecologically vulnerable and delicate semi-arid loess agroecosystems remain inadequately understood.Therefore,we explored the effects of different N and P additions on soil microbial community structure and its associated ecological processes in the farmland of Chinese Loess Plateau based on a 36-a long-term experiment.Nine fertilization treatments with complete interactions of high,medium,and low N and P gradients were set up.Soil physical and chemical properties,along with the microbial community structure were measured in this study.Additionally,relevant ecological processes such as microbial biomass,respiration,N mineralization,and enzyme activity were quantified.To elucidate the relationships between these variables,we examined correlation-mediated processes using statistical techniques,including redundancy analysis(RDA)and structural equation modeling(SEM).The results showed that the addition of N alone had a detrimental effect on soil microbial biomass,mineralized N accumulation,andβ-1,4-glucosidase activity.Conversely,the addition of P exhibited an opposing effect,leading to positive influences on these soil parameters.The interactive addition of N and P significantly changed the microbial community structure,increasing microbial activity(microbial biomass and soil respiration),but decreasing the accumulation of mineralized N.Among them,N24P12 treatment showed the greatest increase in the soil nutrient content and respiration.N12P12 treatment increased the overall enzyme activity and total phospholipid fatty acid(PLFA)content by 70.93%.N and P nutrient contents of the soil dominate the microbial community structure and the corresponding changes in hydrolytic enzymes.Soil microbial biomass,respiration,and overall enzyme activity are driven by mineralized N.Our study provides a theoretical basis for exploring energy conversion processes of soil microbial community and environmental sustainability under long-term N and P additions in semi-arid loess areas.
基金the National Natural Science Foundation of China (No.31960044)the Department of Science and Technology Foundation of Guizhou Province, China [DSTFGC (2019)] for financial support。
文摘To evaluate soil environmental quality of introduced new crops and other traditional crops,and to understand the importance of response of soil microbial community to heavy metal stress,rhizosphere soil samples of different land use types(Sphagnum farming,rice field,grassland and bare land) in Dading Village,Duyun City,Guizhou Province of China were selected as research objects.The differences of soil chemical properties,heavy metal concentration and microbial community among different land use types were compared.The abundance and structural diversity of microbial communities in soil samples were analyzed by 16S rDNA sequencing,the relationship between soil pollution characteristics and microbial community in farmland was studied.The results showed that the different land use types planting different agricultural products under the same growing environment were subject to different heavy metal pollution.Soil chemical properties and heavy metals had significant effects on the soil microbial community.Proteobacteria,Actinobacteriota and Acidobacteriota were the most dominant groups of bacteria.The soil microorganisms responded more actively to the variability of pH,SOM and AK contents,although the variability was not high.With the increase of pH value,the abundance of the dominant species Proteobacteria also increased.Verrucomicrobiota had a better tolerance to the heavy metal Hg.Verrucomicrobiota and Firmicutes had strong resistance to the heavy metal Cd.These results deepen our understanding of the changes and aggregation of microorganisms under different land use patterns in heavy-metal contaminated farmland soils.
基金financially supported by Natural Science Foundation of Zhejiang Province(LY20C160003)the National College Students’Innovation and Entrepreneurship Training Program(202110341063).
文摘Chinese hickory(Carya cathayensis Sarg.)is an important economic forest in Southeastern China.A large amount of hickory husk waste is generated every year but with a low proportion of returning.Meanwhile,intensive management has resulted in soil degradation of Chinese hickory plantations.This study aims to investigate the effects of three Chinese hickory husk returning modes on soil amendment,including soil acidity,soil nutrition,and microbial community.The field experiment carried out four treatments:control(CK),hickory husk mulching(HM),hickory husk biochar(BC),and hickory husk organic fertilizer(OF).The phospholipid fatty acid(PLFA)biomarker method was employed to determine the soil microbial community.After one year of treatment,the results showed that:(i)HM and BC significantly increased soil pH by 0.33 and 1.71 units,respectively;(ii)HM,BC and OF treatments significantly increased the soil organic carbon,alkaline nitrogen,available phosphorous,and available potassium.The OF treatment demonstrated the most significant improvement in the soil nutrient;(iii)The soil microbial biomass significantly increased in the HM,BC and OF treatments,and all microbial groups showed an increasing trend.HM treatment increased the fungal/bacterial ratio(F/B).The OF treatment significantly decreased the Shannon-Wiener diversity(H’)and evenness index(J)of the microbial community(P<0.05).Considering the treatments effects,costs,and ease of operation,our recommended returning modes of Chinese hickory husk are mulching and organic fertilizer produced by composting with manure.
基金Supported by National Modern Agricultural Industry Technology System Construction Project(CARS-10-C12-2020).Qiguo HU(1982-)male+2 种基金P.R.Chinaassociate researcherdevoted to research about breeding and utilization of new sweet potato varieties。
文摘To reveal the response mechanism of soil microbial community in different planting systems of sweet potato,the effects of rotation and intercropping on microbial community structure and carbon source utilization capacities of sweet potato rhizosphere soil were studied by using phospholipid fatty acid(PLFA)and ecological board(BIOLOG ECO)through field positioning experiments.In this study,three treatments were sweet potato continuous cropping,sweet potato-wheat rotation,and sweet potato-corn intercropping.The main results showed that compared with the sweet potato continuous cropping treatment,sweet potato rotation and intercropping changed the PLFA biomass of soil microorganisms;the contents of bacteria increased by 21.82%and 38.77%,respectively(P<0.05);the contents of actinomycetes increased by 6.98%and 12.77%,and the biomass of Gram-positive bacteria increased by 28.60%and 63.44%,respectively;and the biomass of Gram-negative bacteria increased by 18.21%and 22.29%,and the fungal contents decreased by 16.60%and 13.03%,respectively.With the extension of culture time,the average well color development(AWCD value)of sweet potato-corn intercropping was significantly higher than other two treatments.The utilization capacities of carboxylic acid compounds,polymers,carbohydrates,amino acids,and amines in the sweet potato-corn intercropping treatment were significantly increased by 17.28%,14.67%,54.17%,36.62%,and 20.00%,respectively,compared with the sweet potato continuous cropping treatment.The results of the multivariate analysis(RDA)showed that the changes of soil microbial community structure and functional diversity were controlled by many factors,and the soil available potassium and total nitrogen were the main driving factors.However,sweet potato-wheat rotation and sweet potato-corn intercropping could optimize the soil microbial community structure and enhance the microbial functional diversity,and the effect of sweet potato-corn intercropping treatment was better.
基金Supported by Special Fund of Lishui City for Public Interest(2021GYX11)Special Fund of Zhejiang Provincial Department of Finance for Basic Research and Development of Bamboo Charcoal-based Soil Conditioner(20180021)Key Research and Development Project of Zhejiang Province(2018C02031)。
文摘[Objectives]This study was conducted to reveal the effects of bamboo charcoal-based biochar(or bamboo charcoal for short)on soil enzyme activity and microbial community structure.[Methods]The field experiment was carried out at the Modern Agriculture Demonstration Base of Gaoping Village,Gaoping Town,Suichang County,Zhejiang Province.Bamboo charcoal was applied at four different levels:T_(0)(no bamboo charcoal),T_(1)(1125 kg/hm^(2)bamboo charcoal),T_(2)(2250 kg/hm^(2)bamboo charcoal)and T_(3)(3375 kg/hm^(2)bamboo charcoal).Soil physicochemical properties and enzyme activities in different treatments were measured.[Results]The soil fungal,bacterial and actinomycete populations increased significantly in the soils surrounding capsicum roots.The bacterial population,fungal population and fungus/bacterium ratio peaked in Treatment T_(2),up to 7.32×10^(6)cfu/g,2.65×10^(4)cfu/g and 0.36×10^(-2),respectively.The effect of bamboo charcoal in promotingβ-glucoside,catalase,acid phosphatase and sucrase activities was T_(2)>T_(3)>T_(1)>T_(0).With bamboo charcoal increasing,the bacterium population,fungus population,fungus/bacterium ratio,β-glucoside,catalase,acid phosphatase and sucrase activities all increased at first and then decreased.T_(2)treatment showed the best effects in improving soil physicochemical properties and microbial community structure.[Conclusions]Bamboo charcoal significantly improves soil enzyme activity and increases soil microbial population,and thus has important positive effects on the soil ecosystem.
基金Supported by the National Science and Technology Funds for Agriculture(2009GB24910540)Special fund for National Public Service Sectors(Agriculture)Research(200903011)+1 种基金Natural Science Fund Project of Hohai University(2008429811)Central University Basic Research Operating Expenses Project(2010B05314)~~
文摘[Objective] The objective of this study was to investigate the effects of different agricultural managements on soil microbial population,activity,functional diversity and soil enzyme activity in continuous mono-cropping field of strawberry.[Method]A field plot experiment was carried out to evaluate characteristics of soil microbial community by soil enzyme analysis,microbial cultivation and Biolog analysis.[Result]The results showed that bacteria population proportion,the ration of bacteria to fungi,microorganism amount,AWCD,soil dehydrogenase activity,the Shannon,Simpson,and Mcintosh indices of soil microbial communities were obviously increased under strawberry-rice rotation,soil solarization with rice bran,and calcium cyanamide（CaCN2）treatments,in addition,soil urease activity was significantly increased under strawberry-rice rotation and soil solarization with rice bran treatment,when compared with no fertilization.When compared with conventional fertilization treatment,strawberry-rice rotation and soil solarization with rice bran both significantly increased AWCD and Mcintosh index of soil microbial communities,meanwhile respectively increased soil urease and dehydrogenase activity.PCA analyses suggested that carbon utilization of soil microbial communities under strawberry-rice rotation,soil solarization with rice bran,and calcium cyanamide treatment was obviously different from that of conventional fertilization and no fertilization treatment.[Conclusion] strawberry-rice rotation and soil solarization with rice bran were effective agricultural managements to control soil biological degradation under Continuous Cropped Strawberry.
基金Project(50774102)supported by the National Natural Science Foundation of ChinaProject(2004CB619204)supported by the National Basic Research Program of China
文摘To screen the high efficient mixed culture and understand the bioleaching behaviors of mixed culture for low-grade copper sulfide ore bioleaching,ten mixed cultures were collected and screened from different acid mine drainages obtained from sulfide mines of China.The leaching rate was set as criterion to screen the mixed culture and the metagenomic approach.Community genome array（CGA） was used for analyzing the mixed culture microbial community shift during the bioleaching process.The results indicate that the mixed culture obtained from Yinshan（YS） lead-zinc mine in Dexing of Jiangxi province in China reaches the maximum copper extraction（68.89%） during the one bioleaching period of 24 d.CGA results show that YS culture contains nine kinds of bacteria which are belong to six divisions,and the microbial community structure is changing during the bioleaching process.This provides a good way to accelerate the bioleaching process and reveals the microbial community shift during the bioleaching process.
基金Project (51374248) supported by the National Natural Science Foundation of ChinaProject (NCET-13-0595) supported by the Program for New Century Excellent Talents in University,China+3 种基金Project (2012AA061501) supported by the High-tech Research and Development Program of ChinaProject (2010CB630905) supported by the National Basic Research Program of ChinaProject (20120162120010) supported by the Research Fund for the Doctoral Program of Higher Education of ChinaProject (CSUZC2012020) supported by the Open-End Fund for the Valuable in Central South University,China
文摘The variation of microbial community structure was investigated for the tank bioleaching process of Pb-Zn-Sn chalcopyrite concentrate in the presence of mixed moderately thermophilic bacteria. The parameters, such as pH value, solution potential and concentrations of metal ions, were determined by the method of polymerase chain reaction-restriction fragment length polymorphism （PCR-RFLP） to analyze the succession of microbial community. The results showed that a final copper extraction rate of 85.6% could be obtained after tank bioleaching for 30 d. The Acidithiobacillus caldus was the dominant population with abundance of about 73.80%in the initial stage, then Sulfobacillus thermosulfidooxidans dominated from the 18th day to the end of bioleaching, while the abundance of Leptospirillum ferriphilum changed slightly. A higher solution potential within a certain range and appropriate concentration of ferric ions were essential for this tank bioleaching of chalcopyrite.
基金Supported by National and International Scientific and Technological Cooperation Project"The application of Microbial Agents on Mining Reclamation and Ecological Recovery"(2011DFR31230)Key Project of Shanxi academy of Agricultural Science"The Research and Application of Bio-organic Fertilizer on Mining Reclamation and Soil Remediation"(2013zd12)Major Science and Technology Programs of Shanxi Province"Key Technology Research and Demonstration of mining waste land ecosystem Restoration and Reconstruction"(20121101009)~~
文摘As one of the main methods of microbial community functional diversity measurement, biolog method was favored by many researchers for its simple oper- ation, high sensitivity, strong resolution and rich data. But the preprocessing meth- ods reported in the literatures were not the same. In order to screen the best pre- processing method, this paper took three typical treatments to explore the effect of different preprocessing methods on soil microbial community functional diversity. The results showed that, method B＇s overall trend of AWCD values was better than A and C＇s. Method B＇s microbial utilization of six carbon sources was higher, and the result was relatively stable. The Simpson index, Shannon richness index and Car- bon source utilization richness index of the two treatments were B〉C〉A, while the Mclntosh index and Shannon evenness were not very stable, but the difference of variance analysis was not significant, and the method B was always with a smallest variance. Method B＇s principal component analysis was better than A and C＇s. In a word, the method using 250 r/min shaking for 30 minutes and cultivating at 28 ℃ was the best one, because it was simple, convenient, and with good repeatability.
基金Supported by Science and Technology Development Plan of Jilin Province(201105012)~~
文摘Through laboratory simulation, the influence of cadmium on soil respiratory intensity and microbial community were studied by adding different concentrations of heavy metal cadmium. The results indicated that, the soil respiration had a signifi- cant weakening trend in the same culture days with increasing exogenous cadmium content; the soil respiration intensity was decreased obviously with the increase of culture time, especially after 14 d when the soil exogenous cadmium content was in the range of 0.5-3.0 mg/kg, while the soil respiration had not obvious variation over time when the exogenous cadmium content was in the range of 5.0-10.0 mg/kg. The soil microbial communities decreased significantly and were much lower than that of the control treatment in the same culture days with the increasing of soil exogenous cadmium content; the soil microbial community declined significantly with increasing of culture time for all exogenous cadmium treatments. The number of soil microbial communities in treatment with 10 mg/kg of exogenous cadmium were only 46.43%, 32.26%, 28.74%, 27.39% and 24.62% of that in control treatment on the 7th, 14th, 21st, 28th and 42rd of culture, respectively. It indicated that higher concen- tration of cadmium in dark brown soil had a significant inhibitory effect on soil mi- crobial growth.
基金Supported by Doctor Research Fund of Liaocheng University~~
文摘[Objective] The aim was to evaluate the feasibility of biotechnology fulvic acid produced by microbial community LCM9 by the use of corn straws as substrate and its application effect.[Method]Microbial community was obtained from the nature samples,and corn straws were used as fermentation substrate.The yield of biotechnology fulvic acid and its application effect was evaluated.[Result]The yield of biotechnology fulvic acid was up to 15.7% when the water content was 75.0% and fermented after 7 d using corn straws as the only source of nutrition.After 500 mg/kg of biotechnology fulvic acid was added for 5 d,the root length and bud length could be increased by 59.1% and 97.1%,respectively.[Conclusion]A higher yield of biotechnology fulvic acid could be obtained by the method in this experiment and the product could enhance the growth of wheat seedlings.
基金the National Natural Science Foundation of China (Nos.30671207 and 40371063).
文摘Biolog, 16S rRNA gene denaturing gradient gel electrophoresis （DGGE）, and phospholipid fatty acid （PLFA） analyses were used to assess soil microbial community characteristics in a chronosequence of tea garden systems （8-, 50-, and 90- year-old tea gardens）, an adjacent wasteland, and a 90-year-old forest. Biolog analysis showed that the average well color development （AWCD） of all carbon sources and the functional diversity based on the Shannon index decreased （P 〈 0.05） in the following order： wasteland 〉 forest 〉 tea garden. For the DCCE analysis, the genetic diversity based on the Shannon index was significantly lower in the tea garden soils than in the wasteland. However, compared to the 90-year-old forest, the tea garden soils showed significantly higher genetic diversity. PLFA analysis showed that the ratio of Gram positive bacteria to Cram negative bacteria was significantly higher in the tea garden soils than in the wasteland, and the highest value was found in the 90-year-old forest. Both the fungal PLFA and the ratio of fungi to bacteria were significantly higher in the three tea garden soils than in the wasteland and forest, indicating that fungal PLFA was significantly affected by land-use change. Based on cluster analysis of the soil microbial community structure, all three analytical methods showed that land-use change had a greater effect on soil microbial community structure than tea garden age.
基金supported by the National Natural Science Foundation of China (No. 20677014)the National Basic Research Program (973) of China (No. 2006CB403306)
文摘The microbial community composition in wheat rhizosphere was analyzed by detecting colony forming units （CFUs） in agar plates. The total CFUs in rhizosphere were 1.04×10^9/g soil with 9.0×10^8/g bacteria, 1.37×10^8/g actinomyces and 3.6×10^6/g fungi. The 10 dominant bacteria were isolated from wheat rhizosphere and were grouped into genus Bacillus according to their full length 16S rRNA gene sequences. Although belonging to the same genus, the isolated strains exhibited different sensitivities to oxytetracycline. When a series of the rhizosphere soil was exposed under various concentrations of oxytetracycline, the microbial community structure was highly affected with significant decline of CFUs of bacteria and actinomyces （22.2% and 31.7% at 10 mg/kg antibiotic, respectively）. This inhibition was clearly enhanced with the increase exposure dosage of antibiotic and could not be eliminated during 30 d incubation. There was no obvious influence of this treatment on fungi population. Among the four soil enzymes （alkaline phosphatase, acidic phosphatase, dehydrogenase and urease）, only alkaline phospbatase was sensitive to oxytetracycline exposure with 41.3% decline of the enzyme activity at 10 mg/kg antibiotic and further decrease of 64.3%-80.8% when the dosage over 30 mg/kg.
基金Project supported by the Key Project of Chinese Academy of Sciences(No. KZCX3-SW-431, KZCX2-YW-408)the National Natural Sci-ence Foundation of China (No. 40321101, 40571082).
文摘This study focused on the changes of soil microbial diversity and potential inhibitory effects of heavy metals on soil enzymatic activities at different application rates of Cd and/or Pb. The soil used for experiments was collected from Beijing and classified as endoaquepts. Pots containing 500 g of the soil with different Cd and/or Pb application rates were incubated for a period of 0, 2, 9, 12 weeks in a glasshouse and the soil samples were analyzed for individual enzymes, including catalase, alkaline phosphatase and dehydrogenase, and the changes of microbial community structure. Results showed that heavy metals slightly inhibited the enzymatic activities in all the samples spiked with heavy metals. The extent of inhibition increased significantly with increasing level of heavy metals, and varied with the incubation periods. The soil bacterial community structure, as determined by polymerase chain reaction- denaturing gradient gel electrophoresis techniques, was different in the contaminated samples as compared to the control. The highest community change was observed in the samples amended with high level of Cd. Positive correlations were observed among the three enzymatic activities, but negative correlations were found between the amounts of the heavy metals and the enzymatic activities.
基金Project supported by the grants from the US Department of Agriculture, USA (Nos. NRI-1999-35108-8101, NRI-2000-00531, and S-IPM-00-34103-9023), and the Key Projects of the 10th Five-Year Plan of China (No. 2004BA520A14) andScience Foundation of Jiangsu Province, China (No. BK2004002).
文摘Using a scheme of agricultural fields with progressively less intensive management (deintensification), different manage- ment practices in six agroecosystems located near Goldsboro, NC, USA were tested in a large-scale experiment, including two cash-grain cropping systems employing either tillage (CT) or no-tillage (NT), an organic farming system (OR), an integrated cropping system with animals (IN), a successional field (SU), and a plantation woodlot (WO). Microbial phos- pholipid fatty acid (PLFA) profiles and substrate utilization patterns (BIOLOG ECO plates) were measured to examine the effects of deintensification on the structure and diversity of soil microbial communities. Principle component analyses of PLFA and BIOLOG data showed that the microbial community structure diverged among the soils of the six systems. Lower microbial diversity was found in lowly managed ecosystem than that in intensive and moderately managed agro- ecosystems, and both fungal contribution to the total identified PLFAs and the ratio of microbial biomass C/N increased along with agricultural deintensification. Significantly higher ratios of C/N (P < 0.05) were found in the WO and SU systems, and for fungal/bacterial PLFAs in the WO system (P < 0.05). There were also significant decreases (P < 0.05) along with agricultural deintensification for contributions of total bacterial and gram positive (G+) bacterial PLFAs. Agricultural deintensification could facilitate the development of microbial communities that favor soil fungi over bacteria.
基金the National Natural Science Foundation of China (No.30600082)the Australian Research Council (ARC) International Linkage Fellowship (No.LX0560210).
文摘Cucumber (Cucumis sativus) is one of the most widely used vegetable in the world,and different pesticides have been extensively used for controlling the insects and disease pathogens of this plant.However,little is known about how the pesticides affect the microbial community in cucumber phyllosphere.This study was the first attempt to assess the impact of pyrethroid insecticide cyperemethrin on the microbial communities of cucumber phyllosphere using biochemical and genetic approaches.Phospholipid fatty ac...
