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Effects of Nitrogen-Regulating Gene AreA on Growth,Pathogenicity,and Fumonisin Synthesis of Fusarium proliferatum
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作者 SUN Lei CHEN Xu +5 位作者 ZHOU Qianya ZHANG Tianlei YU Qian LIU Lianmeng HUANG Shiwen WANG Ling 《Rice science》 SCIE CSCD 2024年第1期10-13,I0013-I0017,共9页
Rice spikelet rot disease not only threatens rice yields but also poses risks to humans and animals due to the production of the category 2B carcinogen fumonisins by the pathogen Fusarium proliferatum.Nitrogen(N)metab... Rice spikelet rot disease not only threatens rice yields but also poses risks to humans and animals due to the production of the category 2B carcinogen fumonisins by the pathogen Fusarium proliferatum.Nitrogen(N)metabolism is known to have a significant influence on fungal growth and the synthesis of secondary metabolites.AreA is a global N regulatory gene belonging to the GATA transcription factor family.In this study,we observed that theΔAreA mutant exhibited a notable reduction in growth rate and conidium production.Pathogenicity experiments revealed thatΔAreA had almost lost its ability to infect rice spikelets. 展开更多
关键词 METABOLISM FUSARIUM GROWTH
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Insights into triterpene synthesis and unsaturated fatty-acid accumulation provided by chromosomallevel genome analysis of Akebia trifoliata subsp . australis 被引量:5
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作者 Hui Huang Juan Liang +7 位作者 Qi Tan Linfeng Ou Xiaolin Li Caihong Zhong Huilin Huang Ian Max Moller Xianjin Wu Songquan Song 《Horticulture Research》 SCIE 2021年第1期419-433,共15页
Akebia trifoliata subsp.australis is a well-known medicinal and potential woody oil plant in China.The limited genetic information available for A.trifoliata subsp.australis has hindered its exploitation.Here,a high-q... Akebia trifoliata subsp.australis is a well-known medicinal and potential woody oil plant in China.The limited genetic information available for A.trifoliata subsp.australis has hindered its exploitation.Here,a high-quality chromosomelevel genome sequence of A.trifoliata subsp.australis is reported.The de novo genome assembly of 682.14 Mb was generated with a scaffold N50 of 43.11 Mb.The genome includes 25,598 protein-coding genes,and 71.18%(485.55 Mb)of the assembled sequences were identi fi ed as repetitive sequences.An ongoing massive burst of long terminal repeat(LTR)insertions,which occurred~1.0 million years ago,has contributed a large proportion of LTRs in the genome of A.trifoliata subsp.australis.Phylogenetic analysis shows that A.trifoliata subsp.australis is closely related to Aquilegia coerulea and forms a clade with Papaver somniferum and Nelumbo nucifera,which supports the well-established hypothesis of a close relationship between basal eudicot species.The expansion of UDP-glucoronosyl and UDP-glucosyl transferase gene families and fi-amyrin synthase-like genes and the exclusive contraction of terpene synthase gene families may be responsible for the abundant oleanane-type triterpenoids in A.trifoliata subsp.australis.Furthermore,the acyl-ACP desaturase gene family,including 12 stearoyl-acyl-carrier protein desaturase(SAD)genes,has expanded exclusively.A combined transcriptome and fatty-acid analysis of seeds at fi ve developmental stages revealed that homologs of SADs,acyl-lipid desaturase omega fatty acid desaturases(FADs),and oleosins were highly expressed,consistent with the rapid increase in the content of fatty acids,especially unsaturated fatty acids.The genomic sequences of A.trifoliata subsp.australis will be a valuable resource for comparative genomic analyses and molecular breeding. 展开更多
关键词 analysis saturated expanded
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Effect of Light Intensity on Leaf Photosynthetic Characteristics and Accumulation of Flavonoids in Lithocarpus litseifolius (Hance) Chun. (Fagaceae) 被引量:4
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作者 Aimin Li Shenghua Li +4 位作者 Xianjin Wu Jian Zhang Anna He Guang Zhao Xu Yang 《Open Journal of Forestry》 2016年第5期445-459,共16页
The active compounds in herb drugs are mainly secondary metabolites, which are greatly influenced by external conditions. Particularly, light intensity has a great influence on the photosynthesis and accumulation of s... The active compounds in herb drugs are mainly secondary metabolites, which are greatly influenced by external conditions. Particularly, light intensity has a great influence on the photosynthesis and accumulation of secondary metabolites. In this study, the light intensity was changed, and the influence of the light intensity on leaf photosynthetic characteristics, antioxidant enzyme activity and flavone contents of Lithocarpus litseifoliusp (Hance) Chun. was discussed. The results showed that (1) L. litseifolius is a typical heliophyte. As the light intensity decreased, the contents of chlorophyll a (Chl a), chlorophyll b (Chl b) and total chlorophyll (Chl a + b) all increased. However, the Chl a/b ratio gradually decreased. The daily variation of net photosynthetic rate changed from a double-peak curve under natural light to single-peak curve under 20% full light two shading nets. (2) As the light intensity decreased, the SOD and POD activities and the soluble proteins content decreased in the leaves. In contrast, the malondialdehyde content increased. (3) The flavone content was the highest in leaves at one shading nets 60% of full light, and the lowest occurred in leaves at two shading nets 20% of full light. A comprehensive analysis indicated that an appropriate shading could induce shade tolerance in the leaves of L. litseifolius, which promoted the accumulation of flavonoids. L. litseifolius should be planted in the lower position of sunny slope or the upper position of shady slope to increase the content of flavone in the leaves. 展开更多
关键词 Lithocarpus litseifolius (Hance) Chun. Light Intensity Photosynthetic Characteristics Antioxidant Enzyme Activity Flavones Content CULTIVATION
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Knowledge Map of Soil Nutrient Migration Analysis Based on WOS (Web of Science) Database
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作者 Jiafeng Wang Jingsheng Chen +2 位作者 Qiuliang Cai Jinsheng Huang Liuqiang Zhou 《Agricultural Sciences》 CAS 2023年第3期398-421,共24页
It is important to understand the research trends and hotspots of global soil nutrient migration and control. Based on the core collection of WOS (Web of Science), citespace knowledge map analysis tool was used to ana... It is important to understand the research trends and hotspots of global soil nutrient migration and control. Based on the core collection of WOS (Web of Science), citespace knowledge map analysis tool was used to analyze the number of publications, cooperation networks, disciplines, research hotspots and frontier trends on nutrient migration in soil. The results showed that: the number of publications on the study of soil nutrient migration showed a good growth from 1990 to 2021. 173 countries had cooperative relationships. The number of articles published in the United States and China was significantly higher than that in other countries, while Chinese Academy of Sciences was the institution with the largest number of publications. It was a comprehensive system that permeates with agriculture, environmental science, botany and other disciplines. The research of nutrient migration in soil mainly focused on the measures of microbial community in different land types to promote nutrient transformation, improve soil fertility and reduce nutrient loss. In the future, the research trends will be the management measures of soil nutrient loss, the relationship between the change of soil nutrient and plant community diversity, and the remediation of agricultural contaminated soil. Through the above analysis, there was an overall understanding of soil nutrient migration. The research on nutrient migration may continue to increase in the future. It is suggested that Chinese research institutions, teams and universities need to strengthen international cooperation, and speed up their integration with the international community. 展开更多
关键词 CiteSpace Soil Nutrients Visual Analysis Research Progress Nutrient Migration
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Acalypha australis L.extract inhibits B16 melanoma cell metastasis through PI3K/AKT signaling pathway
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作者 Zhi-Zhong Wang Tie-Shan Yi +2 位作者 Yu-Yang He Qin Zhou Bo Chen 《Integrative Medicine Discovery》 2024年第2期1-6,共6页
Background:Melanoma is a deadly skin tumor resulting from the malignant transformation of melanocytes.It is highly malignant and invasive,with the highest mortality rate among skin cancers.Acalypha australis L.(AAL),a... Background:Melanoma is a deadly skin tumor resulting from the malignant transformation of melanocytes.It is highly malignant and invasive,with the highest mortality rate among skin cancers.Acalypha australis L.(AAL),a plant with dual medicinal and culinary purposes,is commonly regarded as an edible wild vegetable in southern China.Additionally,AAL has a long history of medicinal use in China,often employed for its hemostatic,anti-diarrheal,and anti-inflammatory properties.Modern pharmacology has demonstrated that AAL possesses functions such as weight loss,antimicrobial activity,antiviral effects,and treatment for ulcerative colitis.However,there is currently no research available regarding its effectiveness and mechanisms of action on melanoma.Methods:In this investigation,we used methyl thiazolyl tetrazolium assay to detect cell viability,transwell assay to detect cell migration and invasion ability,and Western blot assay to detect relevant signaling pathways.Results:The present study reveals that 2 mg/mL AAL effectively suppresses the metastasis of B16 cells,while simultaneously triggering the expression of key apoptosis-related proteins,including Bcl-2,Bax,and cleaved caspased 3.Subsequent investigations demonstrate that AAL exerts this inhibitory effect via the PI3K/AKT signal transduction pathway,as evidenced by the observed deficits in Ras,AKT,p-AKT,and PI3K expression levels.Conclusion:These findings indicated that AAL could be a valuable therapeutic option for reducing the metastatic potential of B16 melanoma cells. 展开更多
关键词 Acalypha australis L MELANOMA PI3K/AKT pathway
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Plastid genome evolution of a monophyletic group in the subtribe Lauriineae(Laureae,Lauraceae) 被引量:2
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作者 Chao Liu Huan-Huan Chen +4 位作者 Li-Zhou Tang Phyo Kay Khine Li-Hong Han Yu Song Yun-Hong Tan 《Plant Diversity》 SCIE CAS CSCD 2022年第4期377-388,共12页
Litsea,a non-monophyletic group of the tribe Laureae(Lauraceae),plays important roles in the tropical and subtropical forests of Asia,Australia,Central and North America,and the islands of the Pacific.However,intergen... Litsea,a non-monophyletic group of the tribe Laureae(Lauraceae),plays important roles in the tropical and subtropical forests of Asia,Australia,Central and North America,and the islands of the Pacific.However,intergeneric relationships between Litsea and Laurus,Lindera,Parasassafras and Sinosassafras of the tribe Laureae remain unresolved.In this study,we present phylogenetic analyses of seven newly sequenced Litsea plastomes,together with 47 Laureae plastomes obtained from public databases,representing six genera of the Laureae.Our results highlight two highly supported monophyletic groups of Litsea taxa.One is composed of 16 Litsea taxa and two Lindera taxa.The 18 plastomes of these taxa were further compared for their gene structure,codon usage,contraction and expansion of inverted repeats,sequence repeats,divergence hotspots,and gene evolution.The complete plastome size of newly sequenced taxa varied between 152,377 bp(Litsea auriculata)and 154,117 bp(Litsea pierrei).Seven of the 16 Litsea plastomes have a pair of insertions in the IRa(trnL-trnH)and IRb(ycf2)regions.The 18 plastomes of Litsea and Lindera taxa exhibit similar gene features,codon usage,oligonucleotide repeats,and inverted repeat dynamics.The codons with the highest frequency among these taxa favored A/T endings and each of these plastomes had nine divergence hotspots,which are located in the same regions.We also identified six protein coding genes(accD,ndhJ,rbcL,rpoC2,ycf1 and ycf2)under positive selection in Litsea;these genes may play important roles in adaptation of Litsea species to various environments. 展开更多
关键词 LITSEA Phylogenetic analysis Divergent hotspots Gene evolution
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Phylogenomic relationships and molecular convergences to subterranean life in rodent family Spalacidae 被引量:1
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作者 Yuan-Ting Guo Jia Zhang +2 位作者 Dong-Ming Xu Li-Zhou Tang Zhen Liu 《Zoological Research》 SCIE CAS CSCD 2021年第5期671-674,共4页
All extant species in the rodent family Spalacidae are subterranean and have evolved various traits for underground life.However,the phylogenomic relationships among its three subfamilies(Myospalacinae,Spalacinae,and ... All extant species in the rodent family Spalacidae are subterranean and have evolved various traits for underground life.However,the phylogenomic relationships among its three subfamilies(Myospalacinae,Spalacinae,and Rhizomyinae)and the molecular basis underlying their adaptations to underground life remain poorly understood.Here,we inferred the phylogenomic relationships among these subfamilies based on de novo sequencing the genome of the hoary bamboo rat(Rhizomys pruinosus).Analyses showed that 50%of the identified 11028 one-to-one orthologous protein-coding genes and the concatenated sequences of these orthologous genes strongly supported a sister relationship between Myospalacinae and Rhizomyinae. 展开更多
关键词 UNDERGROUND LIFE RODENT
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p53 and NFκB regulate microRNA-34c expression in porcine ovarian granulosa cells
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作者 XU Yuan ZHANG Ai-ling +4 位作者 XIAO Guang ZHANG Zhe CHEN Zan-mou ZHANG Hao LI Jia-qi 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2016年第8期1816-1824,共9页
MicroRNAs(miRNAs) are endogenous 18-24 nucleotide(nt) non-coding RNAs,some of which have been indicated to play key roles in granulosa cells(GCs) function.However,little is known about how the miRNA gene expression it... MicroRNAs(miRNAs) are endogenous 18-24 nucleotide(nt) non-coding RNAs,some of which have been indicated to play key roles in granulosa cells(GCs) function.However,little is known about how the miRNA gene expression itself is regulated in the GCs.Our previous study showed that miR-34 c,identified to be a pro-apoptotic and anti-proliferative factor in many cell types,exerted the same effects in porcine GCs.Here,the transcriptional regulation of miR-34 c expression in GCs was further investigated.5' rapid amplification of cDNA ends(RACE) assay indicated that the pri-miR-34 c transcription start site was located in 1 556 bp upstream of pre-miR-34 c.With dual-luciferase reporter assay,we confirmed a 69 bp core promoter region(-1 799 bp/-1 730 bp) was indispensable for the transcription of miR-34 c.Chromatin immunoprecipitation(ChIP) assay demonstrated that p53,p50,and p65 could bind to the transcription factor binding sites within the 69 bp core promoter region.In addition,deletion of transcripition factor binding sites resulted in obvious change of the miR-34 c promoter activity.Finally,using overexpression and knockdown of p53,p50,and p65 strategies,we showed that p53 and p50 could positively regulated miR-34 c expression,whereas p65 neletively regulated miR-34 c expression in GCs.Our results provide new data about the transcription regulatory mechanism of miRNA genes in GCs. 展开更多
关键词 porcine granulosa cells microRNA-34c expression promoter P53 NFKB
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Genetic Diversity Analysis of Morphological Traits among 22 Peony Cultivars
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作者 Jian CAI Hao LI +2 位作者 Xiang ZHAO Na JIN Tongfu MA 《Agricultural Biotechnology》 CAS 2016年第2期9-11,共3页
[Objective] This study analyzed genetic diversity of 22 representative peony cultivars to investigate genetic differences between peony cultivars and explore excellent germplasm resources,aiming at providing scientifi... [Objective] This study analyzed genetic diversity of 22 representative peony cultivars to investigate genetic differences between peony cultivars and explore excellent germplasm resources,aiming at providing scientific basis for analysis of genetic relationships between different peony cultivars and germplasm innovation.[Method] Flower color,flower type,plant height,plant width,flower diameter,leaf length,leaf width,plant type and leaf type of 22 peony cultivars were surveyed.The genetic distances between peony cultivars were calculated with Euclidean distance method.The genetic diversity of 22 peony cultivars was analyzed by UPGMA cluster analysis.[Result]Based on the overall average of total genetic distance,UPGMA cluster analysis results were classified.Thus,22 peony cultivars were divided into five categories.CategoryⅠconsisted of Yinhongqiaodui,Jizhuahong,Babaoxiang,Chongloudiancui,Congzhongxiao,Weizi,Yanlongzi and Qiejiazi;category II consisted of Huhong;category III consisted of Xiaohuhong,Baiyulan,Yingsuhong,Fengdan,Dajinfeng,Jingyu,Panzhongquguo,Qingshanguanxue,Mojianrong,Dahongyipin and Lanhuakui;category Ⅳ consisted of Haihuang;category Ⅴ consisted of Sihelian.The classification results were consistent with pedigree analysis.Peony cultivars with unknown pedigree were assigned to corresponding heterosis group.[Conclusion]The diversity analysis of morphological traits is an effective method for investigating genetic differences between different cultivars,which may lay the theoretic foundation for breeding,industrial development and application of new peony cultivars. 展开更多
关键词 遗传多样性分析 牡丹栽培 品种间 形态性状 UPGMA聚类分析 遗传差异 遗传距离 欧氏距离法
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Morphology and multigene phylogeny revealed Peroneutypa aquilariae sp.nov.(Diatrypaceae,Xylariales)from Aquilaria sinensis in Yunnan Province,China
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作者 Tian-Ye Du Samantha C.Karunarathna +4 位作者 Xian Zhang Dong-Qin Dai Ying Gao Ausana Mapook Saowaluck Tibpromma 《Studies in Fungi》 2022年第1期128-138,共11页
Dead twigs of Aquilaria sinensis(Thymelaeaceae)with fungal fruiting bodies were collected from Xishuangbanna,Yunnan Province,China.After initial morphological observations,an interesting fungus whose morphologically r... Dead twigs of Aquilaria sinensis(Thymelaeaceae)with fungal fruiting bodies were collected from Xishuangbanna,Yunnan Province,China.After initial morphological observations,an interesting fungus whose morphologically resembled Peroneutypa was isolated.Molecular phylogeny of combined ITS and tub2 showed our fungal collection is phylogenetically closely related to P.mackenziei.However,in morphology,our fungal collection is distinct from P.mackenziei in having an ostiolar canal without periphyses and the absence of paraphyses.Based on unique morphological characteristics and multigene phylogenetic analyses results,our fungal isolate is described in this paper as Peroneutypa aquilariae sp.nov.In addition,this is the first report of the genus Peroneutypa from the host A.sinensis.Full description,illustrations,and a phylogenetic tree to show the placement of the new species are provided.A synoptic table of morphological characteristics in Peroneutypa reported worldwide is also provided. 展开更多
关键词 SP.NOV ILLUSTRATION Aquilaria
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E93 promotes transcription of RHG genes to initiate apoptosis during Drosophila salivary gland metamorphosis
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作者 Jiahui Zhang Wenhao Zhang +6 位作者 Lin Wei Lidan Zhang Jiali Liu Shumin Huang Sheng Li Weike Yang Kang Li 《Insect Science》 SCIE CAS CSCD 2023年第3期588-598,共11页
20-hydroxyecdysone(20E)induced transcription factor E93 is important for larval–adult transition,which functions in programmed cell death of larval obsolete tissues,and the formation of adult new tissues.However,the ... 20-hydroxyecdysone(20E)induced transcription factor E93 is important for larval–adult transition,which functions in programmed cell death of larval obsolete tissues,and the formation of adult new tissues.However,the apoptosis-related genes directly regulated by E93 are still ambiguous.In this study,an E93 mutation fly strain was obtained by clustered regularly interspaced palindromic repeats(CRISPR)/CRISPR-associated protein 9-mediated long exon deletion to investigate whether and how E93 induces apoptosis during larval tissues metamorphosis.The transcriptional profile of E93 was consistent with 3 RHG(rpr,hid,and grim)genes and the effector caspase gene drice,and all their expressions peaked at the initiation of apoptosis during the degradation of salivary glands.The transcription expression of 3 RHG genes decreased and apoptosis was blocked in E93 mutation salivary gland during metamorphosis.In contrast,E93 overexpression promoted the transcription of 3 RHG genes,and induced advanced apoptosis in the salivary gland.Moreover,E93 not only enhance the promoter activities of the 3 RHG genes in Drosophila Kc cells in vitro,but also in the salivary gland in vivo.Our results demonstrated that 20E induced E93 promotes the transcription of RHG genes to trigger apoptosis during obsolete tissues degradation at metamorphosis in Drosophila. 展开更多
关键词 APOPTOSIS DROSOPHILA E93 RHG genes salivary gland TRANSCRIPTION
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Taxonomy,phylogeny and evolution of freshwater Hypocreomycetidae(Sordariomycetes)
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作者 Dan‑Feng Bao Kevin D.Hyde +9 位作者 Sajeewa S.N.Maharachchikumbura Rekhani H.Perera Vinodhini Thiyagaraja Sinang Hongsanan Dhanushka N.Wanasinghe Hong‑Wei Shen Xing‑Guo Tian Li‑Quan Yang Sarunya Nalumpang Zong‑Long Luo 《Fungal Diversity》 SCIE 2023年第4期1-94,共94页
Hypocreomycetidae is a highly diverse group with species from various habitats. This subclass has been reported as pathogenic,endophytic, parasitic, saprobic, fungicolous, lichenicolous, algicolous, coprophilous and i... Hypocreomycetidae is a highly diverse group with species from various habitats. This subclass has been reported as pathogenic,endophytic, parasitic, saprobic, fungicolous, lichenicolous, algicolous, coprophilous and insect fungi from aquatic andterrestrial habitats. In this study, we focused on freshwater fungi of Hypocreomycetidae which resulted 41 fresh collectionsfrom China and Thailand. Based on morphological and phylogenetic analyses, we identified 26 species that belong to twoorders (Hypocreales and Microascales) and six families (Bionectriaceae, Halosphaeriaceae, Microascaceae, Nectriaceae,Sarocladiaceae and Stachybotryaceae). Ten new species are introduced and 13 new habitats and geographic records arereported. Mariannaea superimposita, Stachybotrys chartarum and S. chlorohalonatus are recollected from freshwater habitatsin China. Based on phylogenetic analysis of combined LSU, ITS, SSU, rpb2 and tef1-α sequences data, Emericellopsisis transferred to Hypocreales genera incertae sedis;Pseudoacremonium is transferred to Bionectriaceae;Sedecimiella isplaced in Nectriaceae;Nautosphaeria and Tubakiella are excluded from Halosphaeriaceae and placed in Microascalesgenera incertae sedis;and Faurelina is excluded from Hypocreomycetidae. Varicosporella is placed under Atractium as asynonym of Atractium. In addition, phylogenetic analysis and divergence time estimates showed that Ascocodina, Campylospora,Cornuvesica and Xenodactylariaceae form distinct lineages in Hypocreomycetidae and they evolved in the family/order time frame. Hence, a new order (Xenodactylariales) and three new families (Ascocodinaceae, Campylosporaceae andCornuvesicaceae) are introduced based on phylogenetic analysis, divergence time estimations and morphological characters.Ancestral character state analysis is performed for different habitats of Hypocreomycetidae including freshwater, marineand terrestrial taxa. The result indicates that marine and freshwater fungi evolved independently from terrestrial ancestors.The results further support those early diverging clades of this subclass, mostly comprising terrestrial taxa and freshwaterand marine taxa have been secondarily derived, while the crown clade (Nectriaceae) is represented in all three habitats. Theevolution of various morphological adaptations towards their habitual changes are also discussed. 展开更多
关键词 Ancestral character analysis Divergence time estimates Molecular clock analysis MORPHOLOGY PHYLOGENY Freshwater fungi
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MicroRNA-34c regulates porcine granulosa cell function by targeting forkhead box O3a 被引量:3
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作者 XU Yuan ZHANG Ai-ling +4 位作者 ZHANG Zhe YUAN Xiao-long CHEN Zan-mou ZHANG Hao LI Jia-qi 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2017年第9期2019-2028,共10页
Granulosa cells(GCs) are somatic cells of ovary, the behaviors of GCs are important for ovarian function. MicroRNAs(miRNAs) are a class of endogenous 18–24 nucleotide(nt) non-coding RNAs, some of which have been show... Granulosa cells(GCs) are somatic cells of ovary, the behaviors of GCs are important for ovarian function. MicroRNAs(miRNAs) are a class of endogenous 18–24 nucleotide(nt) non-coding RNAs, some of which have been shown to be important regulators of GCs function. miR-34c involved in the regulation of various biological processes and was identified to be a pro-apoptotic and anti-proliferative factor in many cell types. However, the roles of miR-34c in GCs function remain unknown. In this study, we used Annexin V-FITC and Ed U assays to demonstrate that miR-34c exerted pro-apoptotic and anti-proliferative effects in porcine GCs. Dual-luciferase reporter assays, quantitative real-time PCR(q RT-PCR) and Western blotting identified Forkhead box O3a(Fox O3a) as a direct target gene of miR-34c. The overexpression of FoxO3a rescued the phenotypic change caused by miR-34c in porcine GCs. In conclusion, miR-34c regulate the function of porcine GCs by targeting FoxO3a. 展开更多
关键词 细胞功能 叉头 microRNA ANNEXIN 实时定量PCR 颗粒 卵泡
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Structure,Calculation,Optical Properties and Bioimaging of an Organic Fluorescence Compound
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作者 JIN Feng XIONG Qi-Juan +7 位作者 LIU Zhuo-Ni XIAO Ya-Ting YANG Fang CHENG Ting-Ting ZHANG Lin TAO Dong-Liang LIAO Rong-Bao LIU Yong 《Chinese Journal of Structural Chemistry》 SCIE CAS CSCD 2021年第10期1291-1297,共7页
A π-conjugated optical functional organic compound comprising an electron donor(D) and acceptor(A) was synthesized. The crystal structure was determined through single-crystal X-ray diffraction analysis. It crystalli... A π-conjugated optical functional organic compound comprising an electron donor(D) and acceptor(A) was synthesized. The crystal structure was determined through single-crystal X-ray diffraction analysis. It crystallizes in monoclinic, space group P2_(1) with a = 9.6610(5), b = 8.9093(4), c = 26.303(1)Å, β = 96.262(4)°, V = 2250.5(2)Å^(3), Z = 4, D_(c)= 1.220 Mg/m^(3), F(000) = 872, Μr = 413.50, μ = 0.072 mm^(-1), the final R = 0.0569 and wR = 0.1700 for 8976 observed reflections with I > 2σ(I). Optical properties were studied in detail through theoretical calculation and experimental study. The result reveals that the compound exhibits excellent fluorescence performance and it can be compatible in the cytoplasm of NIH/3T3 cells, showing potential in fluorescence microscopy bioimaging. 展开更多
关键词 crystal structure theoretical calculation organic fluorescence material BIOIMAGING
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A red pomegranate fruit extract-based formula ameliorates anxiety/depression-like behaviors via enhancing serotonin (5-HT) synthesis in C57BL/6 male mice
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作者 Xiping Zhu Dongxiao Sun-Waterhouse Chun Cui 《Food Science and Human Wellness》 SCIE 2021年第3期289-296,共8页
This study investigated the anti-anxiety/anti-depression potential of a formula containing red pomegranate fruit extract(RPFE;40%,m/m),Lactobacillus rhamnosus(JB-1)(34%,m/m),magnesium gluconate(25%,m/m)and vanillin(1%... This study investigated the anti-anxiety/anti-depression potential of a formula containing red pomegranate fruit extract(RPFE;40%,m/m),Lactobacillus rhamnosus(JB-1)(34%,m/m),magnesium gluconate(25%,m/m)and vanillin(1%,m/m).The RPFE formula(dose:2.0,1.5 or 1.0 mg/g·day)reversed behavioral dysfunctions and body weight gain induced by chronic restraint stress combined with corticosterone injection in C57BL/6 male mice.The RPFE formula exhibited the abilities to normalize the levels of serum infl ammatory cytokines(NF-κB,TNF-α,IL-6,IL-1βand IFN-γ)and malondialdehyde(MDA),and activities of superoxide dismutase(SOD),catalase(CAT)and nitric oxide synthase(NOS),as well as relieve the injury of hippocampal neurons.The serotonin(5-HT)levels in hippocampus were increasingly enhanced,which might be mediated by reducing the activity of indoleamine-2,3-dioxygenase(IDO)and increasing the activity of tryptophan hydroxylase(TPH).Thus,the neuroprotective and ameliorating effects on anxiety/depression-like behaviors resulting from the RPFE formula ingestion were possibly related to serotonergic activation,which might be mediated via anti-infl ammatory and anti-oxidant actions. 展开更多
关键词 Behavioral tests Red pomegranate fruit extract 5-HT Anti-infl ammatory ANXIETY/DEPRESSION
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The numbers of fungi:contributions from traditional taxonomic studies and challenges of metabarcoding 被引量:1
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作者 Chayanard Phukhamsakda Rolf Henrik Nilsson +25 位作者 Chitrabhanu S.Bhunjun Antonio Roberto Gomes de Farias Ya-Ru Sun Subodini N.Wijesinghe Mubashar Raza Dan-Feng Bao Li Lu Saowaluck Tibpromma Wei Dong Danushka S.Tennakoon Xing-Guo Tian Yin-Ru Xiong Samantha C.Karunarathna Lei Cai Zong-Long Luo Yong Wang Ishara S.Manawasinghe Erio Camporesi Paul M.Kirk Itthayakorn Promputtha Chang-Hsin Kuo Hong-Yan Su Mingkwan Doilom Yu Li Yong-Ping Fu Kevin D.Hyde 《Fungal Diversity》 SCIE 2022年第3期327-386,共60页
The global diversity of fungi has been estimated using several different approaches.There is somewhere between 2–11 million estimated species,but the number of formally described taxa is around 150,000,a tiny fractio... The global diversity of fungi has been estimated using several different approaches.There is somewhere between 2–11 million estimated species,but the number of formally described taxa is around 150,000,a tiny fraction of the total.In this paper,we examine 12 ascomycete genera as case studies to establish trends in fungal species descriptions,and introduce new species in each genus.To highlight the importance of traditional morpho-molecular methods in publishing new species,we introduce novel taxa in 12 genera that are considered to have low species discovery.We discuss whether the species are likely to be rare or due to a lack of extensive sampling and classification.The genera are Apiospora,Bambusicola,Beltrania,Capronia,Distoseptispora,Endocalyx,Neocatenulostroma,Neodeightonia,Paraconiothyrium,Peroneutypa,Phaeoacremonium and Vanakripa.We discuss host-specificity in selected genera and compare the number of species epithets in each genus with the number of ITS(barcode)sequences deposited in GenBank and UNITE.We furthermore discuss the relationship between the divergence times of these genera with those of their hosts.We hypothesize whether there might be more species in these genera and discuss hosts and habitats that should be investigated for novel species discovery. 展开更多
关键词 12 new taxa ASCOMYCOTA Fungal diversity Fungal numbers High-throughput sequencing HOST-SPECIFICITY
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Taxonomy and phylogeny of hyaline‑spored coelomycetes
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作者 Wen‑Jing Li Eric H.C.McKenzie +12 位作者 Jian‑Kui(Jack)Liu D.Jayarama Bhat Dong‑Qin Dai Erio Camporesi Qing Tian Sajeewa S.N.Maharachchikumbura Zong‑Long Luo Qiu‑Ju Shang Jin‑Feng Zhang Narumon Tangthirasunun Samantha C.Karunarathna Jian‑Chu Xu Kevin D.Hyde 《Fungal Diversity》 SCIE 2020年第1期279-801,共523页
Coelomycete is a general term used for asexual fungi which produce conidia in fruiting bodies:pycnidial,acervular,cupulate,pycnothyria or stromatic conidiomata.The group contains numerous plant pathogenic,saprobic and... Coelomycete is a general term used for asexual fungi which produce conidia in fruiting bodies:pycnidial,acervular,cupulate,pycnothyria or stromatic conidiomata.The group contains numerous plant pathogenic,saprobic and endophytic species associated with a wide range of hosts.Traditionally,morphological characters and host associations have been used as criteria to identify and classify coelomycetes,and this has resulted in a poor understanding of their generic and species boundaries.DNA based taxonomic studies have provided a better outlook of the phylogenetic and evolutionary trends in coelomycetes.However,the present outcomes represent only a preliminary step towards the understanding of coelomycetes.Many genera have not been revisited since they were first described.The present study revises the classification of the hyaline-spored coelomycetes and provides a modern taxonomic framework based on both morphology and phylogeny.In total,248 genera were investigated,of which less than 100 are known to have sequence data.Multi-locus sequence data analyses of 28S nrDNA,18S nrDNA,ITS,RNA polymerase II second largest subunit(rpb2),and part of the translation elongation factor 1-alpha gene(tef1)andβ-tubulin(tub2)gene regions were analysed.As a result,three new genera and 23 new species are introduced.In addition,three new links between sexual and asexual genera are provided.There are 138 genera that lack sequence data,and these are treated as Ascomycota,genera incertae sedis.Line drawings and descriptions are provided based on the examination of types and fresh collections and on the literature. 展开更多
关键词 26 new taxa ASCOMYCOTA Asexual morphs BASIDIOMYCOTA
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Forecasting the number of species of asexually reproducing fungi(Ascomycota and Basidiomycota)
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作者 Nalin N.Wijayawardene Alan J.L.Phillips +21 位作者 Diana Santos Pereira Dong-Qin Dai AndréAptroot Josiane S.Monteiro Irina S.Druzhinina Feng Cai Xinlei Fan Laura Selbmann Claudia Coleine Rafael F.Castañeda-Ruiz Martin Kukwa Adam Flakus Patricia Oliveira Fiuza Paul M.Kirk Kunhiraman C.Rajesh Kumar Ilesha S.leperuma Arachchi Nakarin Suwannarach Li-Zhou Tang Teun Boekhout Chen Shuhui Tan R.P.Prabath K.Jayasinghe Marco Thines 《Fungal Diversity》 SCIE 2022年第3期463-490,共28页
Asexually reproducing fungi play a significant role in essential processes in managed and wild ecosystems such as nutrients cycling and multitrophic interactions.A large number of such taxa are among the most notoriou... Asexually reproducing fungi play a significant role in essential processes in managed and wild ecosystems such as nutrients cycling and multitrophic interactions.A large number of such taxa are among the most notorious plant and animal pathogens.In addition,they have a key role in food production,biotechnology and medicine.Taxa without or rare sexual reproduction are distinguished based on their sporulating structures and conidiomata in traditional morphology-based taxonomy.The number,variation and diversity of asexually reproducing taxa are insufficiently known,even though fungi capable of asexual reproduction may provide an untapped,rich biological resource for future exploitation.Currently,ca.30,000 asexual species belonging to ca.3800 genera have been reported(including 1388 coelomycetous and 2265 hyphomycetous genera).Recent reports(2017–2020)reiterate that the number of asexually producing fungi is higher than the number of frequently sexually-reproducing fungi.With the advent of molecular tools and the abandonment of the dual nomenclature system for pleomorphic fungi,priority criteria were established and revisited in the latest outline of fungi and fungus-like taxa.However,species numbers and taxonomic boundaries of pleomorphic taxa and their synanamorphs or synasexual morphs have yet to be addressed.The number of species of speciose genera(e.g.Alternaria,Aspergillus,Cercospora,Fusarium,Phoma and Pseudocercospora),cryptic species,species of pleomorphic genera,less studied life modes(such as lichenicolous taxa,taxa from extreme environments)and species from biodiversity-rich areas still need evaluation to achieve more reliable estimates of their diversity.This paper discusses the current knowledge on the matter,with diversity estimates,and potential obstacles in several chapters on(1)speciose genera;(2)pleomorphic genera;(3)cryptic species;(4)well-studied but insufficiently resolved taxa,e.g.leaf inhabiting species,marine fungi,(5)less studied life modes,e.g.lichenicolous,rock-inhabiting fungi,insect-associated and yeast-forming taxa and(6)species from biodiversity-rich areas. 展开更多
关键词 Cryptic species DNA sequences MORPHOLOGY Pleomorphism Speciose genera Species identificat
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Refined families of Dothideomycetes:orders and families incertae sedis in Dothideomycetes 被引量:1
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作者 Sinang Hongsanan Kevin D.Hyde +75 位作者 Rungtiwa Phookamsak Dhanushka N.Wanasinghe Eric H.C.McKenzie V.Venkateswara Sarma Robert Lücking Saranyaphat Boonmee Jayarama D.Bhat Ning-Guo Liu Danushka S.Tennakoon Dhandevi Pem Anuruddha Karunarathna Shu-Hua Jiang Gareth E.B.Jones Alan J.L.Phillips Ishara S.Manawasinghe Saowaluck Tibpromma Subashini C.Jayasiri Diana Sandamali Ruvishika S.Jayawardena Nalin N.Wijayawardene Anusha H.Ekanayaka Rajesh Jeewon Yong-Zhong Lu Chayanard Phukhamsakda Asha J.Dissanayake Xiang-Yu Zeng Zong-Long Luo Qing Tian Kasun M.Thambugala Dongqin Dai Milan C.Samarakoon K.W.Thilini Chethana Damien Ertz Mingkwan Doilom Jian-Kui(Jack)Liu Sergio Pérez-Ortega Ave Suija Chanokned Senwanna Subodini N.Wijesinghe Mekala Niranjan Sheng-Nan Zhang Hiran A.Ariyawansa Hong-Bo Jiang Jin-Feng Zhang Chada Norphanphoun Nimali Ide Silva Vinodhini Thiyagaraja Huang Zhang Jadson D.P.Bezerra Ricardo Miranda-González AndréAptroot Hiroyuki Kashiwadani Dulanjalee Harishchandra Emmanuël Sérusiaux Pranami DAbeywickrama Dan-Feng Bao Bandarupalli Devadatha Hai-Xia Wu Kwang Hee Moon Cecile Gueidan Felix Schumm Digvijayini Bundhun Ausana Mapook Jutamart Monkai Chitrabhanu S.Bhunjun Putarak Chomnunti Satinee Suetrong Napalai Chaiwan Monika C.Dayarathne Jing Yang Achala R.Rathnayaka Jian-Chu Xu Jiesheng Zheng Gang Liu Yao Feng Ning Xie 《Fungal Diversity》 SCIE 2020年第6期17-318,共302页
Numerous new taxa and classifications of Dothideomycetes have been published following the last monograph of families of Dothideomycetes in 2013.A recent publication by Honsanan et al.in 2020 expanded information of f... Numerous new taxa and classifications of Dothideomycetes have been published following the last monograph of families of Dothideomycetes in 2013.A recent publication by Honsanan et al.in 2020 expanded information of families in Dothideo-mycetidae and Pleosporomycetidae with modern classifications.In this paper,we provide a refined updated document on orders and families incertae sedis of Dothideomycetes.Each family is provided with an updated description,notes,including figures to represent the morphology,a list of accepted genera,and economic and ecological significances.We also provide phylogenetic trees for each order.In this study,31 orders which consist 50 families are assigned as orders incertae sedis in Dothideomycetes,and 41 families are treated as families incertae sedis due to lack of molecular or morphological evidence.The new order,Catinellales,and four new families,Catinellaceae,Morenoinaceae Neobuelliellaceae and Thyrinulaceae are introduced.Seven genera(Neobuelliella,Pseudomicrothyrium,Flagellostrigula,Swinscowia,Macroconstrictolumina,Pseudobogoriella,and Schummia)are introduced.Seven new species(Acrospermum urticae,Bogoriella complexoluminata,Dothiorella ostryae,Dyfrolomyces distoseptatus,Macroconstrictolumina megalateralis,Patellaria microspora,and Pseu-domicrothyrium thailandicum)are introduced base on morphology and phylogeny,together with two new records/reports and five new collections from different families.Ninety new combinations are also provided in this paper. 展开更多
关键词 Abrothallales Ascrospermales Asterinales Botryosphaeriales Catinellales Cladoriellales Collemopsidiales Dyfrolomycetales Eremithallales Eremomycetales Jahnulales Kirschsteiniotheliales Lembosinales Lichenotheliales Microthyriales Minutisphaerales Monoblastiales Murramarangomycetales new family new genera new order new species Parmulariales Patellariales Phaeotrichales PHYLOGENY Stigmatodiscales Strigulales Superstratomycetales TAXONOMY Trypetheliales Tubeufiales Valsariales Venturiales Zeloasperisporiales
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Fungal diversity notes 929-1035:taxonomic and phylogenetic contributions on genera and species of fungi
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作者 Rungtiwa Phookamsak Kevin D.Hyde +101 位作者 Rajesh Jeewon D.Jayarama Bhat E.B.Gareth Jones Sajeewa S.N.Maharachchikumbura Olivier Raspe Samantha C.Karunarathna Dhanushka N.Wanasinghe Sinang Hongsanan Mingkwan Doilom Danushka S.Tennakoon Alexandre R.Machado Andre L.Firmino Aniket Ghosh Anuruddha Karunarathna Armin Mesic Arun Kumar Dutta Benjarong Thongbai Bandarupalli Devadatha Chada Norphanphoun Chanokned Senwanna Deping Wei Dhandevi Pem Frank Kwekucher Ackah Gen-Nuo Wang Hong-Bo Jiang Hugo Madrid Hyang Burm Lee Ishani D.Goonasekara Ishara S.Manawasinghe Ivana Kusan Josep Cano Josepa Gene Junfu Li Kanad Das Krishnendu Acharya K.N.Anil Raj K.P.Deepna Latha K.W.Thilini Chethana Mao-Qiang He Margarita Duenas Margita Jadan Maria P.Martin Milan C.Samarakoon Monika C.Dayarathne Mubashar Raza Myung Soo Park M.Teresa Telleria Napalai Chaiwan Neven Matocec Nimali Ide Silva Olinto L.Pereira Paras Nath Singh Patinjareveettil Manimohan Priyanka Uniyal Qiu-Ju Shang Rajendra P.Bhatt Rekhani H.Perera Renato Lucio Mendes Alvarenga Sandra Nogal-Prata Sanjay K.Singh Santhiti Vadthanarat Seung-Yoon Oh Shi-Ke Huang Shiwali Rana Sirinapa Konta Soumitra Paloi Subashini C.Jayasiri Sun Jeong Jeon Tahir Mehmood Tatiana Baptista Gibertoni Thuong T.T.Nguyen Upendra Singh Vinodhini Thiyagaraja V.Venkateswara Sarma Wei Dong Xian-Dong Yu Yong-Zhong Lu Young Woon Lim Yun Chen Zdenko Tkalcec Zhi-Feng Zhang Zong-Long Luo Dinushani A.Daranagama Kasun M.Thambugala Saowaluck Tibpromma Erio Camporesi Timur S.Bulgakov Asha J.Dissanayake Indunil C.Senanayake Dong Qin Dai Li-Zhou Tang Sehroon Khan Huang Zhang Itthayakorn Promputtha Lei Cai Putarak Chomnunti Rui-Lin Zhao Saisamorn Lumyong Saranyaphat Boonmee Ting-Chi Wen Peter E.Mortimer Jianchu Xu 《Fungal Diversity》 SCIE 2019年第2期1-273,共273页
This article is the ninth in the series of Fungal Diversity Notes,where 107 taxa distributed in three phyla,nine classes,31 orders and 57 families are described and illustrated.Taxa described in the present study incl... This article is the ninth in the series of Fungal Diversity Notes,where 107 taxa distributed in three phyla,nine classes,31 orders and 57 families are described and illustrated.Taxa described in the present study include 12 new genera,74 new species,three new combinations,two reference specimens,a re-circumscription of the epitype,and 15 records of sexualasexual morph connections,new hosts and new geographical distributions.Twelve new genera comprise Brunneofusispora,Brunneomurispora,Liua,Lonicericola,Neoeutypella,Paratrimmatostroma,Parazalerion,Proliferophorum,Pseudoastrosphaeriellopsis,Septomelanconiella,Velebitea and Vicosamyces.Seventy-four new species are Agaricus memnonius,A.langensis,Aleurodiscus patagonicus,Amanita flavoalba,A.subtropicana,Amphisphaeria mangrovei,Baorangia major,Bartalinia kunmingensis,Brunneofusispora sinensis,Brunneomurispora lonicerae,Capronia camelliaeyunnanensis,Clavulina thindii,Coniochaeta simbalensis,Conlarium thailandense,Coprinus trigonosporus,Liua muriformis,Cyphellophora filicis,Cytospora ulmicola,Dacrymyces invisibilis,Dictyocheirospora metroxylonis,Distoseptispora thysanolaenae,Emericellopsis koreana,Galiicola baoshanensis,Hygrocybe lucida,Hypoxylon teeravasati,Hyweljonesia indica,Keissleriella caraganae,Lactarius olivaceopallidus,Lactifluus midnapurensis,Lembosia brigadeirensis,Leptosphaeria urticae,Lonicericola hyaloseptispora,Lophiotrema mucilaginosis,Marasmiellus bicoloripes,Marasmius indojasminodorus,Micropeltis phetchaburiensis,Mucor orantomantidis,Murilentithecium lonicerae,Neobambusicola brunnea,Neoeutypella baoshanensis,Neoroussoella heveae,Neosetophoma lonicerae,Ophiobolus malleolus,Parabambusicola thysanolaenae,Paratrimmatostroma kunmingensis,Parazalerion indica,Penicillium dokdoense,Peroneutypa mangrovei,Phaeosphaeria cycadis,Phanerochaete australosanguinea,Plectosphaerella kunmingensis,Plenodomus artemisiae,P.lijiangensis,Proliferophorum thailandicum,Pseudoastrosphaeriellopsis kaveriana,Pseudohelicomyces menglunicus,Pseudoplagiostoma mangiferae,Robillarda mangiferae,Roussoella elaeicola,Russula choptae,R.uttarakhandia,Septomelanconiella thailandica,Spencermartinsia acericola,Sphaerellopsis isthmospora,Thozetella lithocarpi,Trechispora echinospora,Tremellochaete atlantica,Trichoderma koreanum,T.pinicola,T.rugulosum,Velebitea chrysotexta,Vicosamyces venturisporus,Wojnowiciella kunmingensis and Zopfiella indica.Three new combinations are Baorangia rufomaculata,Lanmaoa pallidorosea and Wojnowiciella rosicola.The reference specimens of Canalisporium kenyense and Tamsiniella labiosa are designated.The epitype of Sarcopeziza sicula is re-circumscribed based on cyto-and histochemical analyses.The sexual-asexual morph connection of Plenodomus sinensis is reported from ferns and Cirsium for the first time.In addition,the new host records and country records are Amanita altipes,A.melleialba,Amarenomyces dactylidis,Chaetosphaeria panamensis,Coniella vitis,Coprinopsis kubickae,Dothiorella sarmentorum,Leptobacillium leptobactrum var.calidus,Muyocopron lithocarpi,Neoroussoella solani,Periconia cortaderiae,Phragmocamarosporium hederae,Sphaerellopsis paraphysata and Sphaeropsis eucalypticola. 展开更多
关键词 86 new taxa AGARICOMYCETES ASCOMYCOTA BASIDIOMYCOTA Dacrymycetes DOTHIDEOMYCETES Eurotiomycetes LECANOROMYCETES Leotiomycetes Mucoromycetes Mucoromycota Pezizomycetes SORDARIOMYCETES Taxonomy
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